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Volumn 19, Issue 2, 2013, Pages 491-499

Integration of cell line and clinical trial genome-wide analyses supports a polygenic architecture of paclitaxel-induced sensory peripheral neuropathy

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOPHOSPHAMIDE; DOXORUBICIN; PACLITAXEL;

EID: 84872549256     PISSN: 10780432     EISSN: 15573265     Source Type: Journal    
DOI: 10.1158/1078-0432.CCR-12-2618     Document Type: Article
Times cited : (52)

References (45)
  • 1
    • 84869435971 scopus 로고    scopus 로고
    • Six cycles of doxorubicin and cyclophosphamide or paclitaxel are not superior to four cycles as adjuvant chemotherapy for breast cancer in women with zero to three positive axillary nodes: Cancer and leukemia group B 40101
    • Shulman LN, Cirrincione CT, Berry DA, Becker HP, Perez EA, O'Regan R, et al. Six cycles of doxorubicin and cyclophosphamide or paclitaxel are not superior to four cycles as adjuvant chemotherapy for breast cancer in women with zero to three positive axillary nodes: cancer and leukemia group B 40101. J Clin Oncol 2012;30: 4071-6.
    • (2012) J Clin Oncol , vol.30 , pp. 4071-4076
    • Shulman, L.N.1    Cirrincione, C.T.2    Berry, D.A.3    Becker, H.P.4    Perez, E.A.5    O'Regan, R.6
  • 3
    • 84866415102 scopus 로고    scopus 로고
    • A genome-wide association study identifies novel loci for paclitaxel-induced sensory peripheral neuropathy in CALGB 40101
    • Baldwin RM,Owzar K, Zembutsu H, Chhibber A, Kubo M, Jiang C, et al. A genome-wide association study identifies novel loci for paclitaxel-induced sensory peripheral neuropathy in CALGB 40101. Clin Cancer Res 2012;18: 5099-109.
    • (2012) Clin Cancer Res , vol.18 , pp. 5099-5109
    • Baldwin Rmowzar, K.1    Zembutsu, H.2    Chhibber, A.3    Kubo, M.4    Jiang, C.5
  • 4
    • 32944468151 scopus 로고    scopus 로고
    • Mdr-1 single nucleotide polymorphisms in ovarian cancer tissue: G2677T/A correlates with response to paclitaxel chemotherapy
    • Green H, Soderkvist P, Rosenberg P, Horvath G, Peterson C. mdr-1 single nucleotide polymorphisms in ovarian cancer tissue: G2677T/A correlates with response to paclitaxel chemotherapy. Clin Cancer Res 2006;12: 854-9.
    • (2006) Clin Cancer Res , vol.12 , pp. 854-859
    • Green, H.1    Soderkvist, P.2    Rosenberg, P.3    Horvath, G.4    Peterson, C.5
  • 6
    • 84865077921 scopus 로고    scopus 로고
    • Regulatory polymorphisms in beta-tubulin IIa are associated with paclitaxel-induced peripheral neuropathy
    • Leandro-Garcia LJ, Leskela S, Jara C, Green H, Avall-Lundqvist E, Wheeler HE, et al. Regulatory polymorphisms in beta-tubulin IIa are associated with paclitaxel-induced peripheral neuropathy. Clin Cancer Res 2012;18: 4441-8.
    • (2012) Clin Cancer Res , vol.18 , pp. 4441-4448
    • Leandro-Garcia, L.J.1    Leskela, S.2    Jara, C.3    Green, H.4    Avall-Lundqvist, E.5    Wheeler, H.E.6
  • 7
    • 79251476882 scopus 로고    scopus 로고
    • The miR-200 family controls beta-tubulin III expression and is associated with paclitaxel-based treatment response and progression-free survival in ovarian cancer patients
    • Leskela S, Leandro-Garcia LJ, Mendiola M, Barriuso J, Inglada-Perez L, Munoz I, et al. The miR-200 family controls beta-tubulin III expression and is associated with paclitaxel-based treatment response and progression-free survival in ovarian cancer patients. Endocr Relat Cancer 2011;18: 85-95.
    • (2011) Endocr Relat Cancer , vol.18 , pp. 85-95
    • Leskela, S.1    Leandro-Garcia, L.J.2    Mendiola, M.3    Barriuso, J.4    Inglada-Perez, L.5    Munoz, I.6
  • 8
    • 33751044628 scopus 로고    scopus 로고
    • Association of ABCB1 genotypes with paclitaxelmediated peripheral neuropathy and neutropenia
    • Sissung TM, Mross K, Steinberg SM, Behringer D, Figg WD, Sparreboom A, et al. Association of ABCB1 genotypes with paclitaxelmediated peripheral neuropathy and neutropenia. Eur J Cancer 2006;42: 2893-6.
    • (2006) Eur J Cancer , vol.42 , pp. 2893-2896
    • Sissung, T.M.1    Mross, K.2    Steinberg, S.M.3    Behringer, D.4    Figg, W.D.5    Sparreboom, A.6
  • 9
    • 34547438105 scopus 로고    scopus 로고
    • A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity
    • Huang RS, Duan S, Bleibel WK, Kistner EO, Zhang W, Clark TA, et al. A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity. Proc Natl Acad Sci U S A 2007;104: 9758-63.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 9758-9763
    • Huang, R.S.1    Duan, S.2    Bleibel, W.K.3    Kistner, E.O.4    Zhang, W.5    Clark, T.A.6
  • 10
    • 70450189297 scopus 로고    scopus 로고
    • Gemcitabine and arabinosylcytosin pharmacogenomics: Genomewide association and drug response biomarkers
    • Li L, Fridley BL, Kalari K, Jenkins G, Batzler A, Weinshilboum RM, et al. Gemcitabine and arabinosylcytosin pharmacogenomics: genomewide association and drug response biomarkers. PLoS ONE 2009;4: e7765.
    • (2009) PLoS ONE , vol.4
    • Li, L.1    Fridley, B.L.2    Kalari, K.3    Jenkins, G.4    Batzler, A.5    Weinshilboum, R.M.6
  • 12
    • 83755207567 scopus 로고    scopus 로고
    • Lymphoblastoid cell lines in pharmacogenomic discovery and clinical translation
    • Wheeler HE, Dolan ME. Lymphoblastoid cell lines in pharmacogenomic discovery and clinical translation. Pharmacogenomics 2012;13: 55-70.
    • (2012) Pharmacogenomics , vol.13 , pp. 55-70
    • Wheeler, H.E.1    Dolan, M.E.2
  • 13
    • 84872970225 scopus 로고    scopus 로고
    • Genome-wide meta-analysis identifies variants associated with platinating agent susceptibility across populations
    • Aug 16. [Epub ahead of print]
    • Wheeler HE, Gamazon ER, Stark AL, O'Donnell PH, Gorsic LK, Huang RS, et al. Genome-wide meta-analysis identifies variants associated with platinating agent susceptibility across populations. Pharmacogenomics J. 2011 Aug 16. [Epub ahead of print].
    • (2011) Pharmacogenomics J.
    • Wheeler, H.E.1    Gamazon, E.R.2    Stark, A.L.3    O'Donnell, P.H.4    Gorsic, L.K.5    Huang, R.S.6
  • 14
    • 78149250018 scopus 로고    scopus 로고
    • Genome-wide associations and functional genomic studies of musculoskeletal adverse events in women receiving aromatase inhibitors
    • Ingle JN, Schaid DJ, Goss PE, Liu M, Mushiroda T, Chapman JA, et al. Genome-wide associations and functional genomic studies of musculoskeletal adverse events in women receiving aromatase inhibitors. J Clin Oncol 2010;28: 4674-82.
    • (2010) J Clin Oncol , vol.28 , pp. 4674-4682
    • Ingle, J.N.1    Schaid, D.J.2    Goss, P.E.3    Liu, M.4    Mushiroda, T.5    Chapman, J.A.6
  • 15
    • 65249086733 scopus 로고    scopus 로고
    • Wholegenome approach implicates CD44 in cellular resistance to carboplatin
    • Shukla SJ, Duan S, Wu X, Badner JA, Kasza K, Dolan ME. Wholegenome approach implicates CD44 in cellular resistance to carboplatin. Hum Genomics 2009;3: 128-42.
    • (2009) Hum Genomics , vol.3 , pp. 128-142
    • Shukla, S.J.1    Duan, S.2    Wu, X.3    Badner, J.A.4    Kasza, K.5    Dolan, M.E.6
  • 16
    • 80051689137 scopus 로고    scopus 로고
    • Platinum sensitivity-related germline polymorphism discovered via a cell-based approach and analysis of its association with outcome in ovarian cancer patients
    • Huang RS, Johnatty SE, Gamazon ER, Im HK, Ziliak D, Duan S, et al. Platinum sensitivity-related germline polymorphism discovered via a cell-based approach and analysis of its association with outcome in ovarian cancer patients. Clin Cancer Res 2011;17: 5490-500.
    • (2011) Clin Cancer Res , vol.17 , pp. 5490-5500
    • Huang, R.S.1    Johnatty, S.E.2    Gamazon, E.R.3    Im, H.K.4    Ziliak, D.5    Duan, S.6
  • 17
    • 80051801445 scopus 로고    scopus 로고
    • Impact of genetic variation in FKBP5 on clinical response in pediatric acute myeloid leukemia patients: A pilot study
    • Mitra AK, Crews K, Pounds S, Cao X, Downing JR, Raimondi S, et al. Impact of genetic variation in FKBP5 on clinical response in pediatric acute myeloid leukemia patients: a pilot study. Leukemia 2011;25: 1354-6.
    • (2011) Leukemia , vol.25 , pp. 1354-1356
    • Mitra, A.K.1    Crews, K.2    Pounds, S.3    Cao, X.4    Downing, J.R.5    Raimondi, S.6
  • 18
    • 80052442469 scopus 로고    scopus 로고
    • Genetic variation predicting Cisplatin cytotoxicity associated with overall survival in lung cancer patients receiving platinum-based chemotherapy
    • Tan XL, Moyer AM, Fridley BL, Schaid DJ, Niu N, Batzler AJ, et al. Genetic variation predicting Cisplatin cytotoxicity associated with overall survival in lung cancer patients receiving platinum-based chemotherapy. Clin Cancer Res 2011;17: 5801-11.
    • (2011) Clin Cancer Res , vol.17 , pp. 5801-5811
    • Tan, X.L.1    Moyer, A.M.2    Fridley, B.L.3    Schaid, D.J.4    Niu, N.5    Batzler, A.J.6
  • 19
    • 79954535834 scopus 로고    scopus 로고
    • Germline polymorphisms discovered via a cell-based, genome-wide approach predict platinum response in head and neck cancers
    • Ziliak D, O'Donnell PH, Im HK, Gamazon ER, Chen P, Delaney S, et al. Germline polymorphisms discovered via a cell-based, genome-wide approach predict platinum response in head and neck cancers. Transl Res 2011;157: 265-72.
    • (2011) Transl Res , vol.157 , pp. 265-272
    • Ziliak, D.1    O'Donnell, P.H.2    Im, H.K.3    Gamazon, E.R.4    Chen, P.5    Delaney, S.6
  • 25
    • 62649155943 scopus 로고    scopus 로고
    • A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals
    • Browning BL, Browning SR. A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals. Am J Hum Genet 2009;84: 210-23.
    • (2009) Am J Hum Genet , vol.84 , pp. 210-223
    • Browning, B.L.1    Browning, S.R.2
  • 26
    • 79960026939 scopus 로고    scopus 로고
    • Genome-wide local ancestry approach identifies genes and variants associated with chemotherapeutic susceptibility in African Americans
    • Wheeler HE, Gorsic LK, Welsh M, Stark AL, Gamazon ER, Cox NJ, et al. Genome-wide local ancestry approach identifies genes and variants associated with chemotherapeutic susceptibility in African Americans. PLoS ONE 2011;6:e21920.
    • (2011) PLoS ONE , vol.6
    • Wheeler, H.E.1    Gorsic, L.K.2    Welsh, M.3    Stark, A.L.4    Gamazon, E.R.5    Cox, N.J.6
  • 27
    • 0032714352 scopus 로고    scopus 로고
    • Genomic control for association studies
    • Devlin B, Roeder K. Genomic control for association studies. Biometrics 1999;55: 997-1004.
    • (1999) Biometrics , vol.55 , pp. 997-1004
    • Devlin, B.1    Roeder, K.2
  • 28
    • 77955894071 scopus 로고    scopus 로고
    • METAL: Fast and efficientmeta-analysis of genomewide association scans
    • Willer CJ, Li Y, Abecasis GR. METAL: fast and efficientmeta-analysis of genomewide association scans. Bioinformatics 2010;26: 2190-1.
    • (2010) Bioinformatics , vol.26 , pp. 2190-2191
    • Willer, C.J.1    Li, Y.2    Abecasis, G.R.3
  • 29
    • 77953494008 scopus 로고    scopus 로고
    • PermGPU: Using graphics processing units in RNA microarray association studies
    • Shterev ID, Jung SH, George SL, Owzar K. permGPU: using graphics processing units in RNA microarray association studies. BMC Bioinformatics 2010;11:329.
    • (2010) BMC Bioinformatics , vol.11 , pp. 329
    • Shterev, I.D.1    Jung, S.H.2    George, S.L.3    Owzar, K.4
  • 31
    • 77952697081 scopus 로고    scopus 로고
    • Chemotherapeutic drug susceptibility associated SNPs are enriched in expression quantitative trait loci
    • Gamazon ER, Huang RS, Cox NJ, Dolan ME. Chemotherapeutic drug susceptibility associated SNPs are enriched in expression quantitative trait loci. Proc Natl Acad Sci U S A 2010;107: 9287-92.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 9287-9292
    • Gamazon, E.R.1    Huang, R.S.2    Cox, N.J.3    Dolan, M.E.4
  • 33
    • 78649334770 scopus 로고    scopus 로고
    • Heritable and non-genetic factors as variables of pharmacologic phenotypes in lymphoblastoid cell lines
    • Stark AL, Zhang W, Mi S, Duan S, O'Donnell PH, Huang RS, et al. Heritable and non-genetic factors as variables of pharmacologic phenotypes in lymphoblastoid cell lines. Pharmacogenomics J 2010;10: 505-12.
    • (2010) Pharmacogenomics J , vol.10 , pp. 505-512
    • Stark, A.L.1    Zhang, W.2    Mi, S.3    Duan, S.4    O'Donnell, P.H.5    Huang, R.S.6
  • 35
    • 0028973492 scopus 로고
    • Nerve-growth-factor-dependent neurite outgrowth assay; A research model for chemotherapy-induced neuropathy
    • Geldof AA. Nerve-growth-factor-dependent neurite outgrowth assay; a research model for chemotherapy-induced neuropathy. J Cancer Res Clin Oncol 1995;121: 657-60.
    • (1995) J Cancer Res Clin Oncol , vol.121 , pp. 657-660
    • Geldof, A.A.1
  • 36
    • 4444339938 scopus 로고    scopus 로고
    • Amifostine protects against chemotherapy-induced neurotoxicity: An in vitro investigation
    • Verstappen CC, Postma TJ, Geldof AA, Heimans JJ. Amifostine protects against chemotherapy-induced neurotoxicity: an in vitro investigation. Anticancer Res 2004;24: 2337-41.
    • (2004) Anticancer Res , vol.24 , pp. 2337-2341
    • Verstappen, C.C.1    Postma, T.J.2    Geldof, A.A.3    Heimans, J.J.4
  • 37
    • 75649149885 scopus 로고    scopus 로고
    • Methodological challenges of genome-wide association analysis in Africa
    • Teo YY, Small KS, Kwiatkowski DP. Methodological challenges of genome-wide association analysis in Africa. Nat Rev Genet 2010;11: 149-60.
    • (2010) Nat Rev Genet , vol.11 , pp. 149-160
    • Teo, Y.Y.1    Small, K.S.2    Kwiatkowski, D.P.3
  • 38
    • 6344249123 scopus 로고    scopus 로고
    • RFX2 is a potential transcriptional regulatory factor for histone H1t and other genes expressed during the meiotic phase of spermatogenesis
    • Horvath GC, Kistler WS, Kistler MK. RFX2 is a potential transcriptional regulatory factor for histone H1t and other genes expressed during the meiotic phase of spermatogenesis. Biol Reprod 2004;71: 1551-9.
    • (2004) Biol Reprod , vol.71 , pp. 1551-1559
    • Horvath, G.C.1    Kistler, W.S.2    Kistler, M.K.3
  • 39
    • 5144223609 scopus 로고    scopus 로고
    • Regulatory factor X2 (RFX2) binds to the H1t/TE1 promoter element and activates transcription of the testis-specific histone H1t gene
    • Wolfe SA, Wilkerson DC, Prado S, Grimes SR. Regulatory factor X2 (RFX2) binds to the H1t/TE1 promoter element and activates transcription of the testis-specific histone H1t gene. J Cell Biochem 2004;91: 375-83.
    • (2004) J Cell Biochem , vol.91 , pp. 375-383
    • Wolfe, S.A.1    Wilkerson, D.C.2    Prado, S.3    Grimes, S.R.4
  • 40
    • 77953156491 scopus 로고    scopus 로고
    • Transcriptional regulation of the Alstrom syndrome gene ALMS1 by members of the RFX family and Sp1
    • Purvis TL, Hearn T, Spalluto C, Knorz VJ, Hanley KP, Sanchez-Elsner T, et al. Transcriptional regulation of the Alstrom syndrome gene ALMS1 by members of the RFX family and Sp1. Gene 2010;460: 20-9.
    • (2010) Gene , vol.460 , pp. 20-29
    • Purvis, T.L.1    Hearn, T.2    Spalluto, C.3    Knorz, V.J.4    Hanley, K.P.5    Sanchez-Elsner, T.6
  • 41
    • 0033713259 scopus 로고    scopus 로고
    • The RFX-type transcription factor DAF-19 regulates sensory neuron cilium formation in C. elegans
    • Swoboda P, Adler HT, Thomas JH. The RFX-type transcription factor DAF-19 regulates sensory neuron cilium formation in C. elegans. Mol Cell 2000;5: 411-21.
    • (2000) Mol Cell , vol.5 , pp. 411-421
    • Swoboda, P.1    Adler, H.T.2    Thomas, J.H.3
  • 43
    • 0034708205 scopus 로고    scopus 로고
    • Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding
    • Gajiwala KS, Chen H, Cornille F, Roques BP, Reith W, Mach B, et al. Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding. Nature 2000;403: 916-21.
    • (2000) Nature , vol.403 , pp. 916-921
    • Gajiwala, K.S.1    Chen, H.2    Cornille, F.3    Roques, B.P.4    Reith, W.5    MacH, B.6
  • 44
    • 0036020505 scopus 로고    scopus 로고
    • A cAMP-responsive element binding site is essential for sterol regulation of the human lanosterol 14alpha-demethylase gene (CYP51)
    • Halder SK, Fink M, Waterman MR, Rozman D. A cAMP-responsive element binding site is essential for sterol regulation of the human lanosterol 14alpha-demethylase gene (CYP51). Mol Endocrinol 2002;16: 1853-63.
    • (2002) Mol Endocrinol , vol.16 , pp. 1853-1863
    • Halder, S.K.1    Fink, M.2    Waterman, M.R.3    Rozman, D.4


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