메뉴 건너뛰기




Volumn 8, Issue 1, 2013, Pages

Germline DNA Copy Number Aberrations Identified as Potential Prognostic Factors for Breast Cancer Recurrence

Author keywords

[No Author keywords available]

Indexed keywords

ANTHRACYCLINE; DNA; TAXANE DERIVATIVE; TRASTUZUMAB;

EID: 84872484694     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0053850     Document Type: Article
Times cited : (21)

References (45)
  • 2
    • 70450190156 scopus 로고    scopus 로고
    • Canadian Cancer Society's Steering Committee on Cancer Statistics, Toronto, ON: Canadian Cancer Society
    • Canadian Cancer Society's Steering Committee on Cancer Statistics (2011) Canadian Cancer Statistics 2011. Toronto, ON: Canadian Cancer Society.
    • (2011) Canadian Cancer Statistics 2011
  • 3
    • 19344364880 scopus 로고    scopus 로고
    • Effects of chemotherapy and hormonal therapy for early breast cancer on recurrence and 15-year survival: An overview of the randomised trials
    • Early Breast Cancer Trialists' Collaborative Group (EBCTCG)
    • Early Breast Cancer Trialists' Collaborative Group (EBCTCG) (2005) Effects of chemotherapy and hormonal therapy for early breast cancer on recurrence and 15-year survival: An overview of the randomised trials. Lancet 365: 1687-1717.
    • (2005) Lancet , vol.365 , pp. 1687-1717
  • 4
    • 78649825336 scopus 로고    scopus 로고
    • Current and emerging biomarkers in breast cancer: Prognosis and prediction
    • Weigel MT, Dowsett M, (2010) Current and emerging biomarkers in breast cancer: Prognosis and prediction.EndocrRelat Cancer. 17: R245-62.
    • (2010) EndocrRelat Cancer , vol.17
    • Weigel, M.T.1    Dowsett, M.2
  • 6
    • 19944422061 scopus 로고    scopus 로고
    • A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
    • Paik S, Shak S, Tang G, Kim C, Baker J, et al. (2004) A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer. N Engl J Med 351: 2817-2826.
    • (2004) N Engl J Med , vol.351 , pp. 2817-2826
    • Paik, S.1    Shak, S.2    Tang, G.3    Kim, C.4    Baker, J.5
  • 7
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de VijverMJ, He YD, van't Veer LJ, Dai H, Hart AA, et al. (2002) A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 347: 1999-2009.
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • van de Vijver, M.J.1    He, Y.D.2    van't Veer, L.J.3    Dai, H.4    Hart, A.A.5
  • 10
    • 84861190762 scopus 로고    scopus 로고
    • A two-stage association study identifies methyl-CpG-binding domain protein 2 gene polymorphisms as candidates for breast cancer susceptibility
    • Sapkota Y, Robson P, Lai R, Cass CE, Mackey JR, et al. (2012) A two-stage association study identifies methyl-CpG-binding domain protein 2 gene polymorphisms as candidates for breast cancer susceptibility. Eur J Hum Genet 20: 682-689.
    • (2012) Eur J Hum Genet , vol.20 , pp. 682-689
    • Sapkota, Y.1    Robson, P.2    Lai, R.3    Cass, C.E.4    Mackey, J.R.5
  • 11
    • 80054861987 scopus 로고    scopus 로고
    • Potential novel candidate polymorphisms identified in genome-wide association study for breast cancer susceptibility
    • Sehrawat B, Sridharan M, Ghosh S, Robson P, Cass CE, et al. (2011) Potential novel candidate polymorphisms identified in genome-wide association study for breast cancer susceptibility. Hum Genet 130: 529-537.
    • (2011) Hum Genet , vol.130 , pp. 529-537
    • Sehrawat, B.1    Sridharan, M.2    Ghosh, S.3    Robson, P.4    Cass, C.E.5
  • 12
    • 84862776961 scopus 로고    scopus 로고
    • Genome-wide association analysis identifies three new breast cancer susceptibility loci
    • Ghoussaini M, Fletcher O, Michailidou K, Turnbull C, Schmidt MK, et al. (2012) Genome-wide association analysis identifies three new breast cancer susceptibility loci. Nat Genet 44: 312-318.
    • (2012) Nat Genet , vol.44 , pp. 312-318
    • Ghoussaini, M.1    Fletcher, O.2    Michailidou, K.3    Turnbull, C.4    Schmidt, M.K.5
  • 13
    • 84863262523 scopus 로고    scopus 로고
    • Novel genetic markers of breast cancer survival identified by a genome-wide association study
    • Shu XO, Long J, Lu W, Li C, Chen WY, et al. (2012) Novel genetic markers of breast cancer survival identified by a genome-wide association study. Cancer Res 72: 1182-1189.
    • (2012) Cancer Res , vol.72 , pp. 1182-1189
    • Shu, X.O.1    Long, J.2    Lu, W.3    Li, C.4    Chen, W.Y.5
  • 16
    • 77949539805 scopus 로고    scopus 로고
    • Influence of pharmacogenetics on response and toxicity in breast cancer patients treated with doxorubicin and cyclophosphamide
    • Bray J, Sludden J, Griffin MJ, Cole M, Verrill M, et al. (2010) Influence of pharmacogenetics on response and toxicity in breast cancer patients treated with doxorubicin and cyclophosphamide. Br J Cancer 102: 1003-1009.
    • (2010) Br J Cancer , vol.102 , pp. 1003-1009
    • Bray, J.1    Sludden, J.2    Griffin, M.J.3    Cole, M.4    Verrill, M.5
  • 17
    • 75149159605 scopus 로고    scopus 로고
    • Functional genetic polymorphisms in the aromatase gene CYP19 vary the response of breast cancer patients to neoadjuvant therapy with aromatase inhibitors
    • Wang L, Ellsworth KA, Moon I, Pelleymounter LL, Eckloff BW, et al. (2010) Functional genetic polymorphisms in the aromatase gene CYP19 vary the response of breast cancer patients to neoadjuvant therapy with aromatase inhibitors. Cancer Res 70: 319-328.
    • (2010) Cancer Res , vol.70 , pp. 319-328
    • Wang, L.1    Ellsworth, K.A.2    Moon, I.3    Pelleymounter, L.L.4    Eckloff, B.W.5
  • 18
    • 34250006413 scopus 로고    scopus 로고
    • Genome-wide association study identifies novel breast cancer susceptibility loci
    • Easton DF, Pooley KA, Dunning AM, PharoahPD, Thompson D, et al. (2007) Genome-wide association study identifies novel breast cancer susceptibility loci. Nature 447: 1087-1093.
    • (2007) Nature , vol.447 , pp. 1087-1093
    • Easton, D.F.1    Pooley, K.A.2    Dunning, A.M.3    Pharoah, P.D.4    Thompson, D.5
  • 19
    • 44349087530 scopus 로고    scopus 로고
    • Common variants on chromosome 5p12 confer susceptibility to estrogen receptor-positive breast cancer
    • Stacey SN, Manolescu A, Sulem P, Thorlacius S, Gudjonsson SA, et al. (2008) Common variants on chromosome 5p12 confer susceptibility to estrogen receptor-positive breast cancer. Nat Genet 40: 703-706.
    • (2008) Nat Genet , vol.40 , pp. 703-706
    • Stacey, S.N.1    Manolescu, A.2    Sulem, P.3    Thorlacius, S.4    Gudjonsson, S.A.5
  • 22
    • 33751329250 scopus 로고    scopus 로고
    • Global variation in copy number in the human genome
    • Redon R, Ishikawa S, Fitch KR, Feuk L, Perry GH, et al. (2006) Global variation in copy number in the human genome. Nature 444: 444-454.
    • (2006) Nature , vol.444 , pp. 444-454
    • Redon, R.1    Ishikawa, S.2    Fitch, K.R.3    Feuk, L.4    Perry, G.H.5
  • 23
    • 77950405093 scopus 로고    scopus 로고
    • Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls
    • Wellcome Trust Case Control Consortium
    • Wellcome Trust Case Control Consortium, Craddock N, Hurles ME, Cardin N, Pearson RD, et al. (2010) Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls. Nature 464: 713-720.
    • (2010) Nature , vol.464 , pp. 713-720
    • Craddock, N.1    Hurles, M.E.2    Cardin, N.3    Pearson, R.D.4
  • 24
    • 78650943866 scopus 로고    scopus 로고
    • Germline copy number variations in BRCA1-associated ovarian cancer patients
    • Yoshihara K, Tajima A, Adachi S, Quan J, Sekine M, et al. (2011) Germline copy number variations in BRCA1-associated ovarian cancer patients. Genes Chromosomes Cancer 50: 167-177.
    • (2011) Genes Chromosomes Cancer , vol.50 , pp. 167-177
    • Yoshihara, K.1    Tajima, A.2    Adachi, S.3    Quan, J.4    Sekine, M.5
  • 26
    • 33846978695 scopus 로고    scopus 로고
    • Relative impact of nucleotide and copy number variation on gene expression phenotypes
    • Stranger BE, Forrest MS, Dunning M, Ingle CE, Beazley C, et al. (2007) Relative impact of nucleotide and copy number variation on gene expression phenotypes. Science 315: 848-853.
    • (2007) Science , vol.315 , pp. 848-853
    • Stranger, B.E.1    Forrest, M.S.2    Dunning, M.3    Ingle, C.E.4    Beazley, C.5
  • 27
    • 79953677482 scopus 로고    scopus 로고
    • LOH and copy neutral LOH (cnLOH) act as alternative mechanism in sporadic colorectal cancers with chromosomal and microsatellite instability
    • Melcher R, Hartmann E, Zopf W, Herterich S, Wilke P, et al. (2011) LOH and copy neutral LOH (cnLOH) act as alternative mechanism in sporadic colorectal cancers with chromosomal and microsatellite instability. Carcinogenesis 32: 636-642.
    • (2011) Carcinogenesis , vol.32 , pp. 636-642
    • Melcher, R.1    Hartmann, E.2    Zopf, W.3    Herterich, S.4    Wilke, P.5
  • 28
    • 79953294169 scopus 로고    scopus 로고
    • Copy-neutral loss of heterozygosity at the p53 locus in carcinogenesis of esophageal squamous cell carcinomas associated with p53 mutations
    • Saeki H, Kitao H, Yoshinaga K, Nakanoko T, Kubo N, et al. (2011) Copy-neutral loss of heterozygosity at the p53 locus in carcinogenesis of esophageal squamous cell carcinomas associated with p53 mutations. Clin Cancer Res 17: 1731-1740.
    • (2011) Clin Cancer Res , vol.17 , pp. 1731-1740
    • Saeki, H.1    Kitao, H.2    Yoshinaga, K.3    Nakanoko, T.4    Kubo, N.5
  • 29
    • 80052563044 scopus 로고    scopus 로고
    • Comprehensive SNP array study of frequently used neuroblastoma cell lines; copy neutral loss of heterozygosity is common in the cell lines but uncommon in primary tumors
    • Kryh H, Caren H, Erichsen J, SjobergRM, Abrahamsson J, et al. (2011) Comprehensive SNP array study of frequently used neuroblastoma cell lines; copy neutral loss of heterozygosity is common in the cell lines but uncommon in primary tumors. BMC Genomics 12: 443.
    • (2011) BMC Genomics , vol.12 , pp. 443
    • Kryh, H.1    Caren, H.2    Erichsen, J.3    Sjoberg, R.M.4    Abrahamsson, J.5
  • 30
    • 79959214591 scopus 로고    scopus 로고
    • Pathogenesis and consequences of uniparental disomy in cancer
    • Makishima H, Maciejewski JP, (2011) Pathogenesis and consequences of uniparental disomy in cancer.Clin Cancer Res. 17: 3913-3923.
    • (2011) Clin Cancer Res , vol.17 , pp. 3913-3923
    • Makishima, H.1    Maciejewski, J.P.2
  • 31
    • 79959332080 scopus 로고    scopus 로고
    • The consequences of uniparental disomy and copy number neutral loss-of-heterozygosity during human development and cancer
    • Lapunzina P, Monk D, (2011) The consequences of uniparental disomy and copy number neutral loss-of-heterozygosity during human development and cancer. Biol Cell 103: 303-317.
    • (2011) Biol Cell , vol.103 , pp. 303-317
    • Lapunzina, P.1    Monk, D.2
  • 32
    • 77950990572 scopus 로고    scopus 로고
    • Copy neutral loss of heterozygosity: A novel chromosomal lesion in myeloid malignancies
    • O'Keefe C, McDevitt MA, Maciejewski JP, (2010) Copy neutral loss of heterozygosity: A novel chromosomal lesion in myeloid malignancies. Blood 115: 2731-2739.
    • (2010) Blood , vol.115 , pp. 2731-2739
    • O'Keefe, C.1    McDevitt, M.A.2    Maciejewski, J.P.3
  • 33
    • 36148993604 scopus 로고    scopus 로고
    • Prevalence and prognostic significance of allelic imbalance by single-nucleotide polymorphism analysis in low-risk myelodysplastic syndromes
    • Mohamedali A, Gaken J, Twine NA, Ingram W, Westwood N, et al. (2007) Prevalence and prognostic significance of allelic imbalance by single-nucleotide polymorphism analysis in low-risk myelodysplastic syndromes. Blood 110: 3365-3373.
    • (2007) Blood , vol.110 , pp. 3365-3373
    • Mohamedali, A.1    Gaken, J.2    Twine, N.A.3    Ingram, W.4    Westwood, N.5
  • 34
    • 79952833309 scopus 로고    scopus 로고
    • Receptors, associations, and risk factor differences by breast cancer subtypes: Positive or negative?
    • Bernstein L, Lacey JV Jr, (2011) Receptors, associations, and risk factor differences by breast cancer subtypes: Positive or negative? J Natl Cancer Inst 103: 451-453.
    • (2011) J Natl Cancer Inst , vol.103 , pp. 451-453
    • Bernstein, L.1    Lacey Jr., J.V.2
  • 35
    • 24944452378 scopus 로고    scopus 로고
    • REporting recommendations for tumour MARKer prognostic studies (REMARK)
    • McShane LM, Altman DG, Sauerbrei W, Taube SE, Gion M, et al. (2005) REporting recommendations for tumour MARKer prognostic studies (REMARK). Br J Cancer 93: 387-391.
    • (2005) Br J Cancer , vol.93 , pp. 387-391
    • McShane, L.M.1    Altman, D.G.2    Sauerbrei, W.3    Taube, S.E.4    Gion, M.5
  • 36
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad BM, Irizarry RA, Astrand M, Speed TP, (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 37
    • 73849132248 scopus 로고    scopus 로고
    • Copy number variations and cancer susceptibility
    • Shlien A, Malkin D, (2010) Copy number variations and cancer susceptibility. CurrOpinOncol 22: 55-63.
    • (2010) CurrOpinOncol , vol.22 , pp. 55-63
    • Shlien, A.1    Malkin, D.2
  • 39
    • 14344280487 scopus 로고    scopus 로고
    • Frequent fusion of the JAZF1 and JJAZ1 genes in endometrial stromal tumors
    • Koontz JI, Soreng AL, Nucci M, Kuo FC, Pauwels P, et al. (2001) Frequent fusion of the JAZF1 and JJAZ1 genes in endometrial stromal tumors. ProcNatlAcadSci U S A 98: 6348-6353.
    • (2001) ProcNatlAcadSci U S A , vol.98 , pp. 6348-6353
    • Koontz, J.I.1    Soreng, A.L.2    Nucci, M.3    Kuo, F.C.4    Pauwels, P.5
  • 40
    • 33747732171 scopus 로고    scopus 로고
    • Tumor suppressor p16INK4A regulates polycomb-mediated DNA hypermethylation in human mammary epithelial cells
    • Reynolds PA, Sigaroudinia M, Zardo G, Wilson MB, Benton GM, et al. (2006) Tumor suppressor p16INK4A regulates polycomb-mediated DNA hypermethylation in human mammary epithelial cells. J BiolChem 281: 24790-24802.
    • (2006) J BiolChem , vol.281 , pp. 24790-24802
    • Reynolds, P.A.1    Sigaroudinia, M.2    Zardo, G.3    Wilson, M.B.4    Benton, G.M.5
  • 41
    • 84857061060 scopus 로고    scopus 로고
    • Characterization of the nonallelic homologous recombination hotspot PRS3 associated with type-3 NF1 deletions
    • Zickler AM, Hampp S, Messiaen L, Bengesser K, Mussotter T, et al. (2012) Characterization of the nonallelic homologous recombination hotspot PRS3 associated with type-3 NF1 deletions. Hum Mutat 33: 372-383.
    • (2012) Hum Mutat , vol.33 , pp. 372-383
    • Zickler, A.M.1    Hampp, S.2    Messiaen, L.3    Bengesser, K.4    Mussotter, T.5
  • 42
    • 62549144898 scopus 로고    scopus 로고
    • HIV-1/AIDS susceptibility and copy number variation in CCL3L1, a gene encoding a natural ligand for HIV-1 co-receptor CCR5
    • Nakajima T, Kaur G, Mehra N, Kimura A, (2008) HIV-1/AIDS susceptibility and copy number variation in CCL3L1, a gene encoding a natural ligand for HIV-1 co-receptor CCR5. Cytogenet Genome Res 123: 156-160.
    • (2008) Cytogenet Genome Res , vol.123 , pp. 156-160
    • Nakajima, T.1    Kaur, G.2    Mehra, N.3    Kimura, A.4
  • 44
    • 33845930051 scopus 로고    scopus 로고
    • Organic anion transporting polypeptide 2B1 and breast cancer resistance protein interact in the transepithelial transport of steroid sulfates in human placenta
    • Grube M, Reuther S, Meyer ZuSchwabedissen H, Kock K, Draber K, et al. (2007) Organic anion transporting polypeptide 2B1 and breast cancer resistance protein interact in the transepithelial transport of steroid sulfates in human placenta. Drug Metabolism & Disposition 35: 30-35.
    • (2007) Drug Metabolism & Disposition , vol.35 , pp. 30-35
    • Grube, M.1    Reuther, S.2    Meyer ZuSchwabedissen, H.3    Kock, K.4    Draber, K.5
  • 45
    • 84861527388 scopus 로고    scopus 로고
    • The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups
    • Curtis C, Shah SP, Chin SF, Turashvili G, Rueda OM, et al. (2012) The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups. Nature 486: 395-399.
    • (2012) Nature , vol.486 , pp. 395-399
    • Curtis, C.1    Shah, S.P.2    Chin, S.F.3    Turashvili, G.4    Rueda, O.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.