-
1
-
-
12744272974
-
Evolutionary history of the genus Listeria and its virulence genes
-
Schmid MW, Ng EY, Lampidis R, Emmerth M, Walcher M, Kreft J, Goebel W, Wagner M, Schleifer KH. Evolutionary history of the genus Listeria and its virulence genes. Syst Appl Microbiol 2005, 28:1-18.
-
(2005)
Syst Appl Microbiol
, vol.28
, pp. 1-18
-
-
Schmid, M.W.1
Ng, E.Y.2
Lampidis, R.3
Emmerth, M.4
Walcher, M.5
Kreft, J.6
Goebel, W.7
Wagner, M.8
Schleifer, K.H.9
-
2
-
-
77953302886
-
Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest
-
Graves LM, Helsel LO, Steigerwalt AG, Morey RE, Daneshvar MI, Roof SE, Orsi RH, Fortes ED, Milillo SR, den Bakker HC, et al. Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest. Int J Syst Evol Microbiol 2010, 60:1280-1288.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 1280-1288
-
-
Graves, L.M.1
Helsel, L.O.2
Steigerwalt, A.G.3
Morey, R.E.4
Daneshvar, M.I.5
Roof, S.E.6
Orsi, R.H.7
Fortes, E.D.8
Milillo, S.R.9
den Bakker, H.C.10
-
3
-
-
77956669931
-
Listeria rocourtiae sp. nov
-
Leclercq A, Clermont D, Bizet C, Grimont PA, Le Fleche-Mateos A, Roche SM, Buchrieser C, Cadet-Daniel V, Le MA, Lecuit M, et al. Listeria rocourtiae sp. nov. Int J Syst Evol Microbiol 2010, 60:2210-2214.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 2210-2214
-
-
Leclercq, A.1
Clermont, D.2
Bizet, C.3
Grimont, P.A.4
Le Fleche-Mateos, A.5
Roche, S.M.6
Buchrieser, C.7
Cadet-Daniel, V.8
Le, M.A.9
Lecuit, M.10
-
4
-
-
0034934605
-
Listeria pathogenesis and molecular virulence determinants
-
Vazquez-Boland JA, Kuhn M, Berche P, Chakraborty T, Dominguez-Bernal G, Goebel W, Gonzalez-Zorn B, Wehland J, Kreft J. Listeria pathogenesis and molecular virulence determinants. Clin Microbiol Rev 2001, 14:584-640.
-
(2001)
Clin Microbiol Rev
, vol.14
, pp. 584-640
-
-
Vazquez-Boland, J.A.1
Kuhn, M.2
Berche, P.3
Chakraborty, T.4
Dominguez-Bernal, G.5
Goebel, W.6
Gonzalez-Zorn, B.7
Wehland, J.8
Kreft, J.9
-
5
-
-
71849112206
-
Listeriosis: a resurgent foodborne infection
-
Allerberger F, Wagner M. Listeriosis: a resurgent foodborne infection. Clin Microbiol Infect 2010, 16:16-23.
-
(2010)
Clin Microbiol Infect
, vol.16
, pp. 16-23
-
-
Allerberger, F.1
Wagner, M.2
-
6
-
-
0032694976
-
Food-related illness and death in the United States
-
Mead PS, Slutsker L, Dietz V, McCaig LF, Bresee JS, Shapiro C, Griffin PM, Tauxe RV. Food-related illness and death in the United States. Emerg Infect Dis 1999, 5:607-625.
-
(1999)
Emerg Infect Dis
, vol.5
, pp. 607-625
-
-
Mead, P.S.1
Slutsker, L.2
Dietz, V.3
McCaig, L.F.4
Bresee, J.S.5
Shapiro, C.6
Griffin, P.M.7
Tauxe, R.V.8
-
7
-
-
53049109498
-
A new perspective on Listeria monocytogenes evolution
-
Ragon M, Wirth T, Hollandt F, Lavenir R, Lecuit M, Le MA, Brisse S. A new perspective on Listeria monocytogenes evolution. PLoS Pathog 2008, 4:e1000146.
-
(2008)
PLoS Pathog
, vol.4
-
-
Ragon, M.1
Wirth, T.2
Hollandt, F.3
Lavenir, R.4
Lecuit, M.5
Le, M.A.6
Brisse, S.7
-
8
-
-
78751580589
-
Listeria monocytogenes lineages: genomics, evolution, ecology, and phenotypic characteristics
-
Orsi RH, den Bakker HC, Wiedmann M. Listeria monocytogenes lineages: genomics, evolution, ecology, and phenotypic characteristics. Int J Med Microbiol 2011, 301:79-96.
-
(2011)
Int J Med Microbiol
, vol.301
, pp. 79-96
-
-
Orsi, R.H.1
den Bakker, H.C.2
Wiedmann, M.3
-
9
-
-
10744221486
-
New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays
-
Doumith M, Cazalet C, Simoes N, Frangeul L, Jacquet C, Kunst F, Martin P, Cossart P, Glaser P, Buchrieser C. New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays. Infect Immun 2004, 72:1072-1083.
-
(2004)
Infect Immun
, vol.72
, pp. 1072-1083
-
-
Doumith, M.1
Cazalet, C.2
Simoes, N.3
Frangeul, L.4
Jacquet, C.5
Kunst, F.6
Martin, P.7
Cossart, P.8
Glaser, P.9
Buchrieser, C.10
-
10
-
-
55149118920
-
Lineage specific recombination rates and microevolution in Listeria monocytogenes
-
den Bakker HC, Didelot X, Fortes ED, Nightingale KK, Wiedmann M. Lineage specific recombination rates and microevolution in Listeria monocytogenes. BMC Evol Biol 2008, 8:277.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 277
-
-
den Bakker, H.C.1
Didelot, X.2
Fortes, E.D.3
Nightingale, K.K.4
Wiedmann, M.5
-
11
-
-
51349158939
-
Genome-wide analyses reveal lineage specific contributions of positive selection and recombination to the evolution of Listeria monocytogenes
-
Orsi RH, Sun Q, Wiedmann M. Genome-wide analyses reveal lineage specific contributions of positive selection and recombination to the evolution of Listeria monocytogenes. BMC Evol Biol 2008, 8:233.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 233
-
-
Orsi, R.H.1
Sun, Q.2
Wiedmann, M.3
-
12
-
-
77958537946
-
Comparative analysis of plasmids in the genus Listeria
-
Kuenne C, Voget S, Pischimarov J, Oehm S, Goesmann A, Daniel R, Hain T, Chakraborty T. Comparative analysis of plasmids in the genus Listeria. PLoS One 2010, 5:e12511.
-
(2010)
PLoS One
, vol.5
-
-
Kuenne, C.1
Voget, S.2
Pischimarov, J.3
Oehm, S.4
Goesmann, A.5
Daniel, R.6
Hain, T.7
Chakraborty, T.8
-
13
-
-
26844540701
-
Investigation of specific substitutions in virulence genes characterizing phenotypic groups of low-virulence field strains of Listeria monocytogenes
-
Roche SM, Gracieux P, Milohanic E, Albert I, Virlogeux-Payant I, Temoin S, Grepinet O, Kerouanton A, Jacquet C, Cossart P, et al. Investigation of specific substitutions in virulence genes characterizing phenotypic groups of low-virulence field strains of Listeria monocytogenes. Appl Environ Microbiol 2005, 71:6039-6048.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 6039-6048
-
-
Roche, S.M.1
Gracieux, P.2
Milohanic, E.3
Albert, I.4
Virlogeux-Payant, I.5
Temoin, S.6
Grepinet, O.7
Kerouanton, A.8
Jacquet, C.9
Cossart, P.10
-
15
-
-
0026587933
-
Molecular determinants of Listeria monocytogenes pathogenesis
-
Portnoy DA, Chakraborty T, Goebel W, Cossart P. Molecular determinants of Listeria monocytogenes pathogenesis. Infect Immun 1992, 60:1263-1267.
-
(1992)
Infect Immun
, vol.60
, pp. 1263-1267
-
-
Portnoy, D.A.1
Chakraborty, T.2
Goebel, W.3
Cossart, P.4
-
16
-
-
33646844623
-
Listeria monocytogenes: a multifaceted model
-
Hamon M, Bierne H, Cossart P. Listeria monocytogenes: a multifaceted model. Nat Rev Microbiol 2006, 4:423-434.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 423-434
-
-
Hamon, M.1
Bierne, H.2
Cossart, P.3
-
17
-
-
33645051956
-
A spontaneous genomic deletion in Listeria ivanovii identifies LIPI-2, a species-specific pathogenicity island encoding sphingomyelinase and numerous internalins
-
Dominguez-Bernal G, Muller-Altrock S, Gonzalez-Zorn B, Scortti M, Herrmann P, Monzo HJ, Lacharme L, Kreft J, Vazquez-Boland JA. A spontaneous genomic deletion in Listeria ivanovii identifies LIPI-2, a species-specific pathogenicity island encoding sphingomyelinase and numerous internalins. Mol Microbiol 2006, 59:415-432.
-
(2006)
Mol Microbiol
, vol.59
, pp. 415-432
-
-
Dominguez-Bernal, G.1
Muller-Altrock, S.2
Gonzalez-Zorn, B.3
Scortti, M.4
Herrmann, P.5
Monzo, H.J.6
Lacharme, L.7
Kreft, J.8
Vazquez-Boland, J.A.9
-
18
-
-
53049084310
-
Listeriolysin S, a novel peptide haemolysin associated with a subset of lineage I Listeria monocytogenes
-
Cotter PD, Draper LA, Lawton EM, Daly KM, Groeger DS, Casey PG, Ross RP, Hill C. Listeriolysin S, a novel peptide haemolysin associated with a subset of lineage I Listeria monocytogenes. PLoS Pathog 2008, 4:e1000144.
-
(2008)
PLoS Pathog
, vol.4
-
-
Cotter, P.D.1
Draper, L.A.2
Lawton, E.M.3
Daly, K.M.4
Groeger, D.S.5
Casey, P.G.6
Ross, R.P.7
Hill, C.8
-
19
-
-
67249147690
-
In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection
-
Camejo A, Buchrieser C, Couve E, Carvalho F, Reis O, Ferreira P, Sousa S, Cossart P, Cabanes D. In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection. PLoS Pathog 2009, 5:e1000449.
-
(2009)
PLoS Pathog
, vol.5
-
-
Camejo, A.1
Buchrieser, C.2
Couve, E.3
Carvalho, F.4
Reis, O.5
Ferreira, P.6
Sousa, S.7
Cossart, P.8
Cabanes, D.9
-
20
-
-
77953952679
-
Antibody targeting the ferritin-like protein controls Listeria infection
-
Mohamed W, Sethi S, Darji A, Mraheil MA, Hain T, Chakraborty T. Antibody targeting the ferritin-like protein controls Listeria infection. Infect Immun 2010, 78:3306-3314.
-
(2010)
Infect Immun
, vol.78
, pp. 3306-3314
-
-
Mohamed, W.1
Sethi, S.2
Darji, A.3
Mraheil, M.A.4
Hain, T.5
Chakraborty, T.6
-
21
-
-
84862183901
-
Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes
-
Hain T, Ghai R, Billion A, Kuenne CT, Steinweg C, Izar B, Mohamed W, Mraheil MA, Domann E, Schaffrath S, et al. Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes. BMC Genomics 2012, 13:144.
-
(2012)
BMC Genomics
, vol.13
, pp. 144
-
-
Hain, T.1
Ghai, R.2
Billion, A.3
Kuenne, C.T.4
Steinweg, C.5
Izar, B.6
Mohamed, W.7
Mraheil, M.A.8
Domann, E.9
Schaffrath, S.10
-
22
-
-
0036568566
-
Surface proteins and the pathogenic potential of Listeria monocytogenes
-
Cabanes D, Dehoux P, Dussurget O, Frangeul L, Cossart P. Surface proteins and the pathogenic potential of Listeria monocytogenes. Trends Microbiol 2002, 10:238-245.
-
(2002)
Trends Microbiol
, vol.10
, pp. 238-245
-
-
Cabanes, D.1
Dehoux, P.2
Dussurget, O.3
Frangeul, L.4
Cossart, P.5
-
23
-
-
34250773925
-
Listeria monocytogenes surface proteins: from genome predictions to function
-
Bierne H, Cossart P. Listeria monocytogenes surface proteins: from genome predictions to function. Microbiol Mol Biol Rev 2007, 71:377-397.
-
(2007)
Microbiol Mol Biol Rev
, vol.71
, pp. 377-397
-
-
Bierne, H.1
Cossart, P.2
-
24
-
-
69849103306
-
Contributions of six lineage-specific internalin-like genes to invasion efficiency of Listeria monocytogenes
-
Milillo SR, Wiedmann M. Contributions of six lineage-specific internalin-like genes to invasion efficiency of Listeria monocytogenes. Foodborne Pathog Dis 2009, 6:57-70.
-
(2009)
Foodborne Pathog Dis
, vol.6
, pp. 57-70
-
-
Milillo, S.R.1
Wiedmann, M.2
-
25
-
-
33847771773
-
Two variable lymphocyte receptor genes of the inshore hagfish are located far apart on the same chromosome
-
Kasamatsu J, Suzuki T, Ishijima J, Matsuda Y, Kasahara M. Two variable lymphocyte receptor genes of the inshore hagfish are located far apart on the same chromosome. Immunogenetics 2007, 59:329-331.
-
(2007)
Immunogenetics
, vol.59
, pp. 329-331
-
-
Kasamatsu, J.1
Suzuki, T.2
Ishijima, J.3
Matsuda, Y.4
Kasahara, M.5
-
26
-
-
79955483094
-
Design principles of adaptive immune systems
-
Boehm T. Design principles of adaptive immune systems. Nat Rev Immunol 2011, 11:307-317.
-
(2011)
Nat Rev Immunol
, vol.11
, pp. 307-317
-
-
Boehm, T.1
-
27
-
-
79956157571
-
Evolution and classification of the CRISPR-Cas systems
-
Makarova KS, Haft DH, Barrangou R, Brouns SJ, Charpentier E, Horvath P, Moineau S, Mojica FJ, Wolf YI, Yakunin AF, et al. Evolution and classification of the CRISPR-Cas systems. Nat Rev Microbiol 2011, 9:467-477.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 467-477
-
-
Makarova, K.S.1
Haft, D.H.2
Barrangou, R.3
Brouns, S.J.4
Charpentier, E.5
Horvath, P.6
Moineau, S.7
Mojica, F.J.8
Wolf, Y.I.9
Yakunin, A.F.10
-
28
-
-
77954948121
-
Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus
-
Aklujkar M, Lovley DR. Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus. BMC Evol Biol 2010, 10:230.
-
(2010)
BMC Evol Biol
, vol.10
, pp. 230
-
-
Aklujkar, M.1
Lovley, D.R.2
-
29
-
-
77955085897
-
Self-targeting by CRISPR: gene regulation or autoimmunity?
-
Stern A, Keren L, Wurtzel O, Amitai G, Sorek R. Self-targeting by CRISPR: gene regulation or autoimmunity?. Trends Genet 2010, 26:335-340.
-
(2010)
Trends Genet
, vol.26
, pp. 335-340
-
-
Stern, A.1
Keren, L.2
Wurtzel, O.3
Amitai, G.4
Sorek, R.5
-
30
-
-
79953250082
-
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
-
Deltcheva E, Chylinski K, Sharma CM, Gonzales K, Chao Y, Pirzada ZA, Eckert MR, Vogel J, Charpentier E. CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III. Nature 2011, 471:602-607.
-
(2011)
Nature
, vol.471
, pp. 602-607
-
-
Deltcheva, E.1
Chylinski, K.2
Sharma, C.M.3
Gonzales, K.4
Chao, Y.5
Pirzada, Z.A.6
Eckert, M.R.7
Vogel, J.8
Charpentier, E.9
-
31
-
-
78649565669
-
Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
-
den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M. Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss. BMC Genomics 2010, 11:688.
-
(2010)
BMC Genomics
, vol.11
, pp. 688
-
-
den Bakker, H.C.1
Cummings, C.A.2
Ferreira, V.3
Vatta, P.4
Orsi, R.H.5
Degoricija, L.6
Barker, M.7
Petrauskene, O.8
Furtado, M.R.9
Wiedmann, M.10
-
32
-
-
2442531727
-
Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species
-
Nelson KE, Fouts DE, Mongodin EF, Ravel J, Deboy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR, Paulsen IT, et al. Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species. Nucleic Acids Res 2004, 32:2386-2395.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2386-2395
-
-
Nelson, K.E.1
Fouts, D.E.2
Mongodin, E.F.3
Ravel, J.4
Deboy, R.T.5
Kolonay, J.F.6
Rasko, D.A.7
Angiuoli, S.V.8
Gill, S.R.9
Paulsen, I.T.10
-
33
-
-
78349267981
-
Comparative genome-wide analysis of small RNAs of major Gram-positive pathogens: from identification to application
-
Mraheil MA, Billion A, Kuenne C, Pischimarov J, Kreikemeyer B, Engelmann S, Hartke A, Giard JC, Rupnik M, Vorwerk S, et al. Comparative genome-wide analysis of small RNAs of major Gram-positive pathogens: from identification to application. Microb Biotechnol 2010, 3:658-676.
-
(2010)
Microb Biotechnol
, vol.3
, pp. 658-676
-
-
Mraheil, M.A.1
Billion, A.2
Kuenne, C.3
Pischimarov, J.4
Kreikemeyer, B.5
Engelmann, S.6
Hartke, A.7
Giard, J.C.8
Rupnik, M.9
Vorwerk, S.10
-
34
-
-
1842453716
-
Controlling mRNA stability and translation with small, noncoding RNAs
-
Storz G, Opdyke JA, Zhang A. Controlling mRNA stability and translation with small, noncoding RNAs. Curr Opin Microbiol 2004, 7:140-144.
-
(2004)
Curr Opin Microbiol
, vol.7
, pp. 140-144
-
-
Storz, G.1
Opdyke, J.A.2
Zhang, A.3
-
35
-
-
67649268395
-
The Listeria transcriptional landscape from saprophytism to virulence
-
Toledo-Arana A, Dussurget O, Nikitas G, Sesto N, Guet-Revillet H, Balestrino D, Loh E, Gripenland J, Tiensuu T, Vaitkevicius K, et al. The Listeria transcriptional landscape from saprophytism to virulence. Nature 2009, 459:950-956.
-
(2009)
Nature
, vol.459
, pp. 950-956
-
-
Toledo-Arana, A.1
Dussurget, O.2
Nikitas, G.3
Sesto, N.4
Guet-Revillet, H.5
Balestrino, D.6
Loh, E.7
Gripenland, J.8
Tiensuu, T.9
Vaitkevicius, K.10
-
36
-
-
79958034240
-
The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages
-
Mraheil MA, Billion A, Mohamed W, Mukherjee K, Kuenne C, Pischimarov J, Krawitz C, Retey J, Hartsch T, Chakraborty T, et al. The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages. Nucleic Acids Res 2011, 39:4235-4248.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 4235-4248
-
-
Mraheil, M.A.1
Billion, A.2
Mohamed, W.3
Mukherjee, K.4
Kuenne, C.5
Pischimarov, J.6
Krawitz, C.7
Retey, J.8
Hartsch, T.9
Chakraborty, T.10
-
37
-
-
33847371621
-
Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets
-
Mandin P, Repoila F, Vergassola M, Geissmann T, Cossart P. Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets. Nucleic Acids Res 2007, 35:962-974.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 962-974
-
-
Mandin, P.1
Repoila, F.2
Vergassola, M.3
Geissmann, T.4
Cossart, P.5
-
38
-
-
33745616103
-
Identification of small Hfq-binding RNAs in Listeria monocytogenes
-
Christiansen JK, Nielsen JS, Ebersbach T, Valentin-Hansen P, Sogaard-Andersen L, Kallipolitis BH. Identification of small Hfq-binding RNAs in Listeria monocytogenes. RNA 2006, 12:1383-1396.
-
(2006)
RNA
, vol.12
, pp. 1383-1396
-
-
Christiansen, J.K.1
Nielsen, J.S.2
Ebersbach, T.3
Valentin-Hansen, P.4
Sogaard-Andersen, L.5
Kallipolitis, B.H.6
-
39
-
-
84860715141
-
Comparative transcriptomics of pathogenic and non-pathogenic Listeria species
-
Wurtzel O, Sesto N, Mellin JR, Karunker I, Edelheit S, Becavin C, Archambaud C, Cossart P, Sorek R. Comparative transcriptomics of pathogenic and non-pathogenic Listeria species. Mol Syst Biol 2012, 8:583.
-
(2012)
Mol Syst Biol
, vol.8
, pp. 583
-
-
Wurtzel, O.1
Sesto, N.2
Mellin, J.R.3
Karunker, I.4
Edelheit, S.5
Becavin, C.6
Archambaud, C.7
Cossart, P.8
Sorek, R.9
-
40
-
-
75149149874
-
Deep RNA sequencing of Listeria monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs
-
Oliver HF, Orsi RH, Ponnala L, Keich U, Wang W, Sun Q, Cartinhour SW, Filiatrault MJ, Wiedmann M, Boor KJ. Deep RNA sequencing of Listeria monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs. BMC Genomics 2009, 10:641.
-
(2009)
BMC Genomics
, vol.10
, pp. 641
-
-
Oliver, H.F.1
Orsi, R.H.2
Ponnala, L.3
Keich, U.4
Wang, W.5
Sun, Q.6
Cartinhour, S.W.7
Filiatrault, M.J.8
Wiedmann, M.9
Boor, K.J.10
-
41
-
-
51549107073
-
Identification of a sigma B-dependent small noncoding RNA in Listeria monocytogenes
-
Nielsen JS, Olsen AS, Bonde M, Valentin-Hansen P, Kallipolitis BH. Identification of a sigma B-dependent small noncoding RNA in Listeria monocytogenes. J Bacteriol 2008, 190:6264-6270.
-
(2008)
J Bacteriol
, vol.190
, pp. 6264-6270
-
-
Nielsen, J.S.1
Olsen, A.S.2
Bonde, M.3
Valentin-Hansen, P.4
Kallipolitis, B.H.5
-
42
-
-
25444524604
-
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"
-
Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, Angiuoli SV, Crabtree J, Jones AL, Durkin AS, et al. Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome". Proc Natl Acad Sci U S A 2005, 102:13950-13955.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 13950-13955
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Donati, C.4
Medini, D.5
Ward, N.L.6
Angiuoli, S.V.7
Crabtree, J.8
Jones, A.L.9
Durkin, A.S.10
-
43
-
-
36549020646
-
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome
-
Hiller NL, Janto B, Hogg JS, Boissy R, Yu S, Powell E, Keefe R, Ehrlich NE, Shen K, Hayes J, et al. Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome. J Bacteriol 2007, 189:8186-8195.
-
(2007)
J Bacteriol
, vol.189
, pp. 8186-8195
-
-
Hiller, N.L.1
Janto, B.2
Hogg, J.S.3
Boissy, R.4
Yu, S.5
Powell, E.6
Keefe, R.7
Ehrlich, N.E.8
Shen, K.9
Hayes, J.10
-
44
-
-
59249089471
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths
-
Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Bingen E, Bonacorsi S, Bouchier C, Bouvet O, et al. Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 2009, 5:e1000344.
-
(2009)
PLoS Genet
, vol.5
-
-
Touchon, M.1
Hoede, C.2
Tenaillon, O.3
Barbe, V.4
Baeriswyl, S.5
Bidet, P.6
Bingen, E.7
Bonacorsi, S.8
Bouchier, C.9
Bouvet, O.10
-
45
-
-
34548846699
-
Evolution of the core and pan-genome of Streptococcus: positive selection, recombination, and genome composition
-
Lefebure T, Stanhope MJ. Evolution of the core and pan-genome of Streptococcus: positive selection, recombination, and genome composition. Genome Biol 2007, 8:R71.
-
(2007)
Genome Biol
, vol.8
-
-
Lefebure, T.1
Stanhope, M.J.2
-
46
-
-
36549029848
-
Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains
-
Hogg JS, Hu FZ, Janto B, Boissy R, Hayes J, Keefe R, Post JC, Ehrlich GD. Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains. Genome Biol 2007, 8:R103.
-
(2007)
Genome Biol
, vol.8
-
-
Hogg, J.S.1
Hu, F.Z.2
Janto, B.3
Boissy, R.4
Hayes, J.5
Keefe, R.6
Post, J.C.7
Ehrlich, G.D.8
-
47
-
-
77956600970
-
Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification
-
Deng X, Phillippy AM, Li Z, Salzberg SL, Zhang W. Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification. BMC Genomics 2010, 11:500.
-
(2010)
BMC Genomics
, vol.11
, pp. 500
-
-
Deng, X.1
Phillippy, A.M.2
Li, Z.3
Salzberg, S.L.4
Zhang, W.5
-
48
-
-
0035955375
-
Comparative genomics of Listeria species
-
Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P, Chakraborty T, et al. Comparative genomics of Listeria species. Science 2001, 294:849-852.
-
(2001)
Science
, vol.294
, pp. 849-852
-
-
Glaser, P.1
Frangeul, L.2
Buchrieser, C.3
Rusniok, C.4
Amend, A.5
Baquero, F.6
Berche, P.7
Bloecker, H.8
Brandt, P.9
Chakraborty, T.10
-
49
-
-
77949463821
-
High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak
-
Gilmour MW, Graham M, Van DG, Tyler S, Kent H, Trout-Yakel KM, Larios O, Allen V, Lee B, Nadon C. High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak. BMC Genomics 2010, 11:120.
-
(2010)
BMC Genomics
, vol.11
, pp. 120
-
-
Gilmour, M.W.1
Graham, M.2
Van, D.G.3
Tyler, S.4
Kent, H.5
Trout-Yakel, K.M.6
Larios, O.7
Allen, V.8
Lee, B.9
Nadon, C.10
-
50
-
-
33745750178
-
Invasiveness is a variable and heterogeneous phenotype in Listeria monocytogenes serotype strains
-
Chatterjee SS, Otten S, Hain T, Lingnau A, Carl UD, Wehland J, Domann E, Chakraborty T. Invasiveness is a variable and heterogeneous phenotype in Listeria monocytogenes serotype strains. Int J Med Microbiol 2006, 296:277-286.
-
(2006)
Int J Med Microbiol
, vol.296
, pp. 277-286
-
-
Chatterjee, S.S.1
Otten, S.2
Hain, T.3
Lingnau, A.4
Carl, U.D.5
Wehland, J.6
Domann, E.7
Chakraborty, T.8
-
51
-
-
82555169542
-
Revival of Seeliger's historical 'Special listeria culture Collection'
-
Haase JK, Murphy RA, Choudhury KR, Achtman M. Revival of Seeliger's historical 'Special listeria culture Collection'. Environ Microbiol 2011, 13:3163-3171.
-
(2011)
Environ Microbiol
, vol.13
, pp. 3163-3171
-
-
Haase, J.K.1
Murphy, R.A.2
Choudhury, K.R.3
Achtman, M.4
-
52
-
-
0023728933
-
Virulence of Listeria spp.: course of infection in resistant and susceptible mice
-
Mainou-Fowler T, MacGowan AP, Postlethwaite R. Virulence of Listeria spp.: course of infection in resistant and susceptible mice. J Med Microbiol 1988, 27:131-140.
-
(1988)
J Med Microbiol
, vol.27
, pp. 131-140
-
-
Mainou-Fowler, T.1
MacGowan, A.P.2
Postlethwaite, R.3
-
53
-
-
33845887435
-
GECO-linear visualization for comparative genomics
-
Kuenne CT, Ghai R, Chakraborty T, Hain T. GECO-linear visualization for comparative genomics. Bioinformatics 2007, 23:125-126.
-
(2007)
Bioinformatics
, vol.23
, pp. 125-126
-
-
Kuenne, C.T.1
Ghai, R.2
Chakraborty, T.3
Hain, T.4
-
54
-
-
78650827616
-
BIGSdb: Scalable analysis of bacterial genome variation at the population level
-
Jolley KA, Maiden MC. BIGSdb: Scalable analysis of bacterial genome variation at the population level. BMC Bioinforma 2010, 11:595.
-
(2010)
BMC Bioinforma
, vol.11
, pp. 595
-
-
Jolley, K.A.1
Maiden, M.C.2
-
55
-
-
55049125445
-
Comparative genomics: the bacterial pan-genome
-
Tettelin H, Riley D, Cattuto C, Medini D. Comparative genomics: the bacterial pan-genome. Curr Opin Microbiol 2008, 11:472-477.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 472-477
-
-
Tettelin, H.1
Riley, D.2
Cattuto, C.3
Medini, D.4
-
56
-
-
70449432929
-
Efficient oligonucleotide probe selection for pan-genomic tiling arrays
-
Phillippy AM, Deng X, Zhang W, Salzberg SL. Efficient oligonucleotide probe selection for pan-genomic tiling arrays. BMC Bioinforma 2009, 10:293.
-
(2009)
BMC Bioinforma
, vol.10
, pp. 293
-
-
Phillippy, A.M.1
Deng, X.2
Zhang, W.3
Salzberg, S.L.4
-
57
-
-
75149160936
-
The bacterial pathogen Listeria monocytogenes: an emerging model in prokaryotic transcriptomics
-
Cossart P, Archambaud C. The bacterial pathogen Listeria monocytogenes: an emerging model in prokaryotic transcriptomics. J Biol 2009, 8:107.
-
(2009)
J Biol
, vol.8
, pp. 107
-
-
Cossart, P.1
Archambaud, C.2
-
58
-
-
33750468709
-
Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes
-
Hain T, Steinweg C, Kuenne CT, Billion A, Ghai R, Chatterjee SS, Domann E, Karst U, Goesmann A, Bekel T, et al. Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes. J Bacteriol 2006, 188:7405-7415.
-
(2006)
J Bacteriol
, vol.188
, pp. 7405-7415
-
-
Hain, T.1
Steinweg, C.2
Kuenne, C.T.3
Billion, A.4
Ghai, R.5
Chatterjee, S.S.6
Domann, E.7
Karst, U.8
Goesmann, A.9
Bekel, T.10
-
59
-
-
0033959106
-
Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution
-
Loessner MJ, Inman RB, Lauer P, Calendar R. Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution. Mol Microbiol 2000, 35:324-340.
-
(2000)
Mol Microbiol
, vol.35
, pp. 324-340
-
-
Loessner, M.J.1
Inman, R.B.2
Lauer, P.3
Calendar, R.4
-
60
-
-
0032959547
-
Cell wall teichoic acid glycosylation in Listeria monocytogenes serotype 4b requires gtcA, a novel, serogroup-specific gene
-
Promadej N, Fiedler F, Cossart P, Dramsi S, Kathariou S. Cell wall teichoic acid glycosylation in Listeria monocytogenes serotype 4b requires gtcA, a novel, serogroup-specific gene. J Bacteriol 1999, 181:418-425.
-
(1999)
J Bacteriol
, vol.181
, pp. 418-425
-
-
Promadej, N.1
Fiedler, F.2
Cossart, P.3
Dramsi, S.4
Kathariou, S.5
-
61
-
-
0036425161
-
The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration
-
Burrus V, Pavlovic G, Decaris B, Guedon G. The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration. Plasmid 2002, 48:77-97.
-
(2002)
Plasmid
, vol.48
, pp. 77-97
-
-
Burrus, V.1
Pavlovic, G.2
Decaris, B.3
Guedon, G.4
-
62
-
-
0344562918
-
Functional studies of a fibrinogen binding protein from Staphylococcus epidermidis
-
Pei L, Palma M, Nilsson M, Guss B, Flock JI. Functional studies of a fibrinogen binding protein from Staphylococcus epidermidis. Infect Immun 1999, 67:4525-4530.
-
(1999)
Infect Immun
, vol.67
, pp. 4525-4530
-
-
Pei, L.1
Palma, M.2
Nilsson, M.3
Guss, B.4
Flock, J.I.5
-
63
-
-
1242274564
-
Complete genome sequence of the Lactococcus lactis temperate phage phiLC3: comparative analysis of phiLC3 and its relatives in lactococci and streptococci
-
Blatny JM, Godager L, Lunde M, Nes IF. Complete genome sequence of the Lactococcus lactis temperate phage phiLC3: comparative analysis of phiLC3 and its relatives in lactococci and streptococci. Virology 2004, 318:231-244.
-
(2004)
Virology
, vol.318
, pp. 231-244
-
-
Blatny, J.M.1
Godager, L.2
Lunde, M.3
Nes, I.F.4
-
64
-
-
60549116580
-
Short-term genome evolution of Listeria monocytogenes in a non-controlled environment
-
Orsi RH, Borowsky ML, Lauer P, Young SK, Nusbaum C, Galagan JE, Birren BW, Ivy RA, Sun Q, Graves LM, et al. Short-term genome evolution of Listeria monocytogenes in a non-controlled environment. BMC Genomics 2008, 9:539.
-
(2008)
BMC Genomics
, vol.9
, pp. 539
-
-
Orsi, R.H.1
Borowsky, M.L.2
Lauer, P.3
Young, S.K.4
Nusbaum, C.5
Galagan, J.E.6
Birren, B.W.7
Ivy, R.A.8
Sun, Q.9
Graves, L.M.10
-
65
-
-
84865240356
-
Prophage excision activates Listeria competence genes that promote phagosomal escape and virulence
-
Rabinovich L, Sigal N, Borovok I, Nir-Paz R, Herskovits AA. Prophage excision activates Listeria competence genes that promote phagosomal escape and virulence. Cell 2012, 150:792-802.
-
(2012)
Cell
, vol.150
, pp. 792-802
-
-
Rabinovich, L.1
Sigal, N.2
Borovok, I.3
Nir-Paz, R.4
Herskovits, A.A.5
-
66
-
-
35448958030
-
Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells
-
Chan YC, Raengpradub S, Boor KJ, Wiedmann M. Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells. Appl Environ Microbiol 2007, 73:6484-6498.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 6484-6498
-
-
Chan, Y.C.1
Raengpradub, S.2
Boor, K.J.3
Wiedmann, M.4
-
67
-
-
0030896350
-
Identification, cloning, and characterization of the Ima operon, whose gene products are unique to Listeria monocytogenes
-
Schaferkordt S, Chakraborty T. Identification, cloning, and characterization of the Ima operon, whose gene products are unique to Listeria monocytogenes. J Bacteriol 1997, 179:2707-2716.
-
(1997)
J Bacteriol
, vol.179
, pp. 2707-2716
-
-
Schaferkordt, S.1
Chakraborty, T.2
-
68
-
-
33846975418
-
PILER-CR: fast and accurate identification of CRISPR repeats
-
Edgar RC. PILER-CR: fast and accurate identification of CRISPR repeats. BMC Bioinforma 2007, 8:18.
-
(2007)
BMC Bioinforma
, vol.8
, pp. 18
-
-
Edgar, R.C.1
-
69
-
-
34447644810
-
CRISPR recognition tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
-
Bland C, Ramsey TL, Sabree F, Lowe M, Brown K, Kyrpides NC, Hugenholtz P. CRISPR recognition tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats. BMC Bioinforma 2007, 8:209.
-
(2007)
BMC Bioinforma
, vol.8
, pp. 209
-
-
Bland, C.1
Ramsey, T.L.2
Sabree, F.3
Lowe, M.4
Brown, K.5
Kyrpides, N.C.6
Hugenholtz, P.7
-
70
-
-
34248400310
-
A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes
-
Haft DH, Selengut J, Mongodin EF, Nelson KE. A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes. PLoS Comput Biol 2005, 1:e60.
-
(2005)
PLoS Comput Biol
, vol.1
-
-
Haft, D.H.1
Selengut, J.2
Mongodin, E.F.3
Nelson, K.E.4
-
71
-
-
79551599525
-
Mugsy: fast multiple alignment of closely related whole genomes
-
Angiuoli SV, Salzberg SL. Mugsy: fast multiple alignment of closely related whole genomes. Bioinformatics 2011, 27:334-342.
-
(2011)
Bioinformatics
, vol.27
, pp. 334-342
-
-
Angiuoli, S.V.1
Salzberg, S.L.2
-
72
-
-
3042643735
-
Genome phylogenetic analysis based on extended gene contents
-
Gu X, Zhang H. Genome phylogenetic analysis based on extended gene contents. Mol Biol Evol 2004, 21:1401-1408.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1401-1408
-
-
Gu, X.1
Zhang, H.2
-
73
-
-
34248578293
-
Assessment of phylogenomic and orthology approaches for phylogenetic inference
-
Dutilh BE, den Noort V, van der Heijden RT, Boekhout T, Snel B, Huynen MA. Assessment of phylogenomic and orthology approaches for phylogenetic inference. Bioinformatics 2007, 23:815-824.
-
(2007)
Bioinformatics
, vol.23
, pp. 815-824
-
-
Dutilh, B.E.1
den Noort, V.2
van der Heijden, R.T.3
Boekhout, T.4
Snel, B.5
Huynen, M.A.6
-
74
-
-
64549123977
-
Listeria monocytogenes serovar 4a is a possible evolutionary intermediate between L. monocytogenes serovars 1/2a and 4b and L. innocua
-
Chen J, Jiang L, Chen X, Luo X, Chen Y, Yu Y, Tian G, Liu D, Fang W. Listeria monocytogenes serovar 4a is a possible evolutionary intermediate between L. monocytogenes serovars 1/2a and 4b and L. innocua. J Microbiol Biotechnol 2009, 19:238-249.
-
(2009)
J Microbiol Biotechnol
, vol.19
, pp. 238-249
-
-
Chen, J.1
Jiang, L.2
Chen, X.3
Luo, X.4
Chen, Y.5
Yu, Y.6
Tian, G.7
Liu, D.8
Fang, W.9
-
75
-
-
80052544749
-
Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7
-
Chen J, Xia Y, Cheng C, Fang C, Shan Y, Jin G, Fang W. Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7. J Bacteriol 2011, 193:5019-5020.
-
(2011)
J Bacteriol
, vol.193
, pp. 5019-5020
-
-
Chen, J.1
Xia, Y.2
Cheng, C.3
Fang, C.4
Shan, Y.5
Jin, G.6
Fang, W.7
-
76
-
-
79551682170
-
Gene gain and loss events in Rickettsia and Orientia species
-
Georgiades K, Merhej V, El KK, Raoult D, Pontarotti P. Gene gain and loss events in Rickettsia and Orientia species. Biol Direct 2011, 6:6.
-
(2011)
Biol Direct
, vol.6
, pp. 6
-
-
Georgiades, K.1
Merhej, V.2
El, K.K.3
Raoult, D.4
Pontarotti, P.5
-
77
-
-
0032900532
-
Genome phylogeny based on gene content
-
Snel B, Bork P, Huynen MA. Genome phylogeny based on gene content. Nat Genet 1999, 21:108-110.
-
(1999)
Nat Genet
, vol.21
, pp. 108-110
-
-
Snel, B.1
Bork, P.2
Huynen, M.A.3
-
78
-
-
77950649022
-
Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island
-
van Schaik W, Top J, Riley DR, Boekhorst J, Vrijenhoek JE, Schapendonk CM, Hendrickx AP, Nijman IJ, Bonten MJ, Tettelin H, et al. Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island. BMC Genomics 2010, 11:239.
-
(2010)
BMC Genomics
, vol.11
, pp. 239
-
-
van Schaik, W.1
Top, J.2
Riley, D.R.3
Boekhorst, J.4
Vrijenhoek, J.E.5
Schapendonk, C.M.6
Hendrickx, A.P.7
Nijman, I.J.8
Bonten, M.J.9
Tettelin, H.10
-
79
-
-
12844275386
-
Contribution of three bile-associated loci, bsh, pva, and btlB, to gastrointestinal persistence and bile tolerance of Listeria monocytogenes
-
Begley M, Sleator RD, Gahan CG, Hill C. Contribution of three bile-associated loci, bsh, pva, and btlB, to gastrointestinal persistence and bile tolerance of Listeria monocytogenes. Infect Immun 2005, 73:894-904.
-
(2005)
Infect Immun
, vol.73
, pp. 894-904
-
-
Begley, M.1
Sleator, R.D.2
Gahan, C.G.3
Hill, C.4
-
80
-
-
80052698780
-
Adaptation of Listeria monocytogenes to oxidative and nitrosative stress in IFN-γ-activated macrophages
-
Mraheil MA, Billion A, Mohamed W, Rawool D, Hain T, Chakraborty T. Adaptation of Listeria monocytogenes to oxidative and nitrosative stress in IFN-γ-activated macrophages. Int J Med Microbiol 2011, 301:547-555.
-
(2011)
Int J Med Microbiol
, vol.301
, pp. 547-555
-
-
Mraheil, M.A.1
Billion, A.2
Mohamed, W.3
Rawool, D.4
Hain, T.5
Chakraborty, T.6
-
81
-
-
79952515250
-
A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response
-
Lebreton A, Lakisic G, Job V, Fritsch L, Tham TN, Camejo A, Mattei PJ, Regnault B, Nahori MA, Cabanes D, et al. A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response. Science 2011, 331:1319-1321.
-
(2011)
Science
, vol.331
, pp. 1319-1321
-
-
Lebreton, A.1
Lakisic, G.2
Job, V.3
Fritsch, L.4
Tham, T.N.5
Camejo, A.6
Mattei, P.J.7
Regnault, B.8
Nahori, M.A.9
Cabanes, D.10
-
82
-
-
77955797429
-
A five-gene stress survival islet (SSI-1) that contributes to the growth of Listeria monocytogenes in suboptimal conditions
-
Ryan S, Begley M, Hill C, Gahan CG. A five-gene stress survival islet (SSI-1) that contributes to the growth of Listeria monocytogenes in suboptimal conditions. J Appl Microbiol 2010, 109:984-995.
-
(2010)
J Appl Microbiol
, vol.109
, pp. 984-995
-
-
Ryan, S.1
Begley, M.2
Hill, C.3
Gahan, C.G.4
-
83
-
-
47749136159
-
Glycerol metabolism and PrfA activity in Listeria monocytogenes
-
Joseph B, Mertins S, Stoll R, Schar J, Umesha KR, Luo Q, Muller-Altrock S, Goebel W. Glycerol metabolism and PrfA activity in Listeria monocytogenes. J Bacteriol 2008, 190:5412-5430.
-
(2008)
J Bacteriol
, vol.190
, pp. 5412-5430
-
-
Joseph, B.1
Mertins, S.2
Stoll, R.3
Schar, J.4
Umesha, K.R.5
Luo, Q.6
Muller-Altrock, S.7
Goebel, W.8
-
84
-
-
41749105070
-
Inhibition of ROCK activity allows InlF-mediated invasion and increased virulence of Listeria monocytogenes
-
Kirchner M, Higgins DE. Inhibition of ROCK activity allows InlF-mediated invasion and increased virulence of Listeria monocytogenes. Mol Microbiol 2008, 68:749-767.
-
(2008)
Mol Microbiol
, vol.68
, pp. 749-767
-
-
Kirchner, M.1
Higgins, D.E.2
-
85
-
-
76149089105
-
Galleria mellonella as a model system for studying Listeria pathogenesis
-
Mukherjee K, Altincicek B, Hain T, Domann E, Vilcinskas A, Chakraborty T. Galleria mellonella as a model system for studying Listeria pathogenesis. Appl Environ Microbiol 2010, 76:310-317.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 310-317
-
-
Mukherjee, K.1
Altincicek, B.2
Hain, T.3
Domann, E.4
Vilcinskas, A.5
Chakraborty, T.6
-
86
-
-
79953214600
-
Variation in Listeria monocytogenes dose responses in relation to subtypes encoding a full-length or truncated internalin A
-
Chen Y, Ross WH, Whiting RC, Van SA, Nightingale KK, Wiedmann M, Scott VN. Variation in Listeria monocytogenes dose responses in relation to subtypes encoding a full-length or truncated internalin A. Appl Environ Microbiol 2011, 77:1171-1180.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 1171-1180
-
-
Chen, Y.1
Ross, W.H.2
Whiting, R.C.3
Van, S.A.4
Nightingale, K.K.5
Wiedmann, M.6
Scott, V.N.7
-
87
-
-
0006039719
-
Homologous pairs of regulatory proteins control activity of Bacillus subtilis transcription factor sigma(b) in response to environmental stress
-
Kang CM, Brody MS, Akbar S, Yang X, Price CW. Homologous pairs of regulatory proteins control activity of Bacillus subtilis transcription factor sigma(b) in response to environmental stress. J Bacteriol 1996, 178:3846-3853.
-
(1996)
J Bacteriol
, vol.178
, pp. 3846-3853
-
-
Kang, C.M.1
Brody, M.S.2
Akbar, S.3
Yang, X.4
Price, C.W.5
-
88
-
-
0035183122
-
Sigma(B) activity in Staphylococcus aureus is controlled by RsbU and an additional factor(s) during bacterial growth
-
Palma M, Cheung AL. sigma(B) activity in Staphylococcus aureus is controlled by RsbU and an additional factor(s) during bacterial growth. Infect Immun 2001, 69:7858-7865.
-
(2001)
Infect Immun
, vol.69
, pp. 7858-7865
-
-
Palma, M.1
Cheung, A.L.2
-
89
-
-
4644324300
-
RsbT and RsbV contribute to sigmaB-dependent survival under environmental, energy, and intracellular stress conditions in Listeria monocytogenes
-
Chaturongakul S, Boor KJ. RsbT and RsbV contribute to sigmaB-dependent survival under environmental, energy, and intracellular stress conditions in Listeria monocytogenes. Appl Environ Microbiol 2004, 70:5349-5356.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 5349-5356
-
-
Chaturongakul, S.1
Boor, K.J.2
-
90
-
-
79955397980
-
Fold and function of the InlB B-repeat
-
Ebbes M, Bleymuller WM, Cernescu M, Nolker R, Brutschy B, Niemann HH. Fold and function of the InlB B-repeat. J Biol Chem 2011, 286:15496-15506.
-
(2011)
J Biol Chem
, vol.286
, pp. 15496-15506
-
-
Ebbes, M.1
Bleymuller, W.M.2
Cernescu, M.3
Nolker, R.4
Brutschy, B.5
Niemann, H.H.6
-
91
-
-
33745332082
-
Listeria monocytogenes internalins are highly diverse and evolved by recombination and positive selection
-
Tsai YH, Orsi RH, Nightingale KK, Wiedmann M. Listeria monocytogenes internalins are highly diverse and evolved by recombination and positive selection. Infect Genet Evol 2006, 6:378-389.
-
(2006)
Infect Genet Evol
, vol.6
, pp. 378-389
-
-
Tsai, Y.H.1
Orsi, R.H.2
Nightingale, K.K.3
Wiedmann, M.4
-
92
-
-
34447279920
-
Distribution of internalin gene profiles of Listeria monocytogenes isolates from different sources associated with phylogenetic lineages
-
Jia Y, Nightingale KK, Boor KJ, Ho A, Wiedmann M, McGann P. Distribution of internalin gene profiles of Listeria monocytogenes isolates from different sources associated with phylogenetic lineages. Foodborne Pathog Dis 2007, 4:222-232.
-
(2007)
Foodborne Pathog Dis
, vol.4
, pp. 222-232
-
-
Jia, Y.1
Nightingale, K.K.2
Boor, K.J.3
Ho, A.4
Wiedmann, M.5
McGann, P.6
-
93
-
-
83255174915
-
Ruminant rhombencephalitis-associated Listeria monocytogenes alleles linked to a multilocus variable-number tandem-repeat analysis complex
-
Balandyte L, Brodard I, Frey J, Oevermann A, Abril C. Ruminant rhombencephalitis-associated Listeria monocytogenes alleles linked to a multilocus variable-number tandem-repeat analysis complex. Appl Environ Microbiol 2011, 77:8325-8335.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 8325-8335
-
-
Balandyte, L.1
Brodard, I.2
Frey, J.3
Oevermann, A.4
Abril, C.5
-
94
-
-
58549111075
-
Molecular characterization of the arginine deiminase system in Listeria monocytogenes: regulation and role in acid tolerance
-
Ryan S, Begley M, Gahan CG, Hill C. Molecular characterization of the arginine deiminase system in Listeria monocytogenes: regulation and role in acid tolerance. Environ Microbiol 2009, 11:432-445.
-
(2009)
Environ Microbiol
, vol.11
, pp. 432-445
-
-
Ryan, S.1
Begley, M.2
Gahan, C.G.3
Hill, C.4
-
95
-
-
0041335360
-
Genome diversification in phylogenetic lineages I and II of Listeria monocytogenes: identification of segments unique to lineage II populations
-
Zhang C, Zhang M, Ju J, Nietfeldt J, Wise J, Terry PM, Olson M, Kachman SD, Wiedmann M, Samadpour M, et al. Genome diversification in phylogenetic lineages I and II of Listeria monocytogenes: identification of segments unique to lineage II populations. J Bacteriol 2003, 185:5573-5584.
-
(2003)
J Bacteriol
, vol.185
, pp. 5573-5584
-
-
Zhang, C.1
Zhang, M.2
Ju, J.3
Nietfeldt, J.4
Wise, J.5
Terry, P.M.6
Olson, M.7
Kachman, S.D.8
Wiedmann, M.9
Samadpour, M.10
-
96
-
-
59749096296
-
Immunity to the bacteriocin sublancin 168 Is determined by the SunI (YolF) protein of Bacillus subtilis
-
Dubois JY, Kouwen TR, Schurich AK, Reis CR, Ensing HT, Trip EN, Zweers JC, den Dijl JM. Immunity to the bacteriocin sublancin 168 Is determined by the SunI (YolF) protein of Bacillus subtilis. Antimicrob Agents Chemother 2009, 53:651-661.
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 651-661
-
-
Dubois, J.Y.1
Kouwen, T.R.2
Schurich, A.K.3
Reis, C.R.4
Ensing, H.T.5
Trip, E.N.6
Zweers, J.C.7
den Dijl, J.M.8
-
97
-
-
0035883519
-
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution
-
Kobayashi I. Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution. Nucleic Acids Res 2001, 29:3742-3756.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 3742-3756
-
-
Kobayashi, I.1
-
98
-
-
84864823820
-
SRNAdb: a small non-coding RNA database for gram-positive bacteria
-
Pischimarov J, Kuenne C, Billion A, Hemberger J, Cemic F, Chakraborty T, Hain T. sRNAdb: a small non-coding RNA database for gram-positive bacteria. BMC Genomics 2012, 13:384.
-
(2012)
BMC Genomics
, vol.13
, pp. 384
-
-
Pischimarov, J.1
Kuenne, C.2
Billion, A.3
Hemberger, J.4
Cemic, F.5
Chakraborty, T.6
Hain, T.7
-
99
-
-
78349287024
-
Novel factor rescues ribosomes trapped on non-stop mRNAs
-
Himeno H. Novel factor rescues ribosomes trapped on non-stop mRNAs. Mol Microbiol 2010, 78:789-791.
-
(2010)
Mol Microbiol
, vol.78
, pp. 789-791
-
-
Himeno, H.1
-
100
-
-
50949123272
-
Rapid identification and typing of listeria species by matrix-assisted laser desorption ionization-time of flight mass spectrometry
-
Barbuddhe SB, Maier T, Schwarz G, Kostrzewa M, Hof H, Domann E, Chakraborty T, Hain T. Rapid identification and typing of listeria species by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Appl Environ Microbiol 2008, 74:5402-5407.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 5402-5407
-
-
Barbuddhe, S.B.1
Maier, T.2
Schwarz, G.3
Kostrzewa, M.4
Hof, H.5
Domann, E.6
Chakraborty, T.7
Hain, T.8
-
101
-
-
0037561991
-
GenDB-an open source genome annotation system for prokaryote genomes
-
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, et al. GenDB-an open source genome annotation system for prokaryote genomes. Nucleic Acids Res 2003, 31:2187-2195.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2187-2195
-
-
Meyer, F.1
Goesmann, A.2
McHardy, A.C.3
Bartels, D.4
Bekel, T.5
Clausen, J.6
Kalinowski, J.7
Linke, B.8
Rupp, O.9
Giegerich, R.10
-
102
-
-
33750980713
-
Augur-a computational pipeline for whole genome microbial surface protein prediction and classification
-
Billion A, Ghai R, Chakraborty T, Hain T. Augur-a computational pipeline for whole genome microbial surface protein prediction and classification. Bioinformatics 2006, 22:2819-2820.
-
(2006)
Bioinformatics
, vol.22
, pp. 2819-2820
-
-
Billion, A.1
Ghai, R.2
Chakraborty, T.3
Hain, T.4
-
103
-
-
34548491198
-
Internalins: a complex family of leucine-rich repeat-containing proteins in Listeria monocytogenes
-
Bierne H, Sabet C, Personnic N, Cossart P. Internalins: a complex family of leucine-rich repeat-containing proteins in Listeria monocytogenes. Microbes Infect 2007, 9:1156-1166.
-
(2007)
Microbes Infect
, vol.9
, pp. 1156-1166
-
-
Bierne, H.1
Sabet, C.2
Personnic, N.3
Cossart, P.4
-
104
-
-
84858077472
-
The Pfam protein families database
-
Punta M, Coggill PC, Eberhardt RY, Mistry J, Tate J, Boursnell C, Pang N, Forslund K, Ceric G, Clements J, et al. The Pfam protein families database. Nucleic Acids Res 2012, 40:D290-D301.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Punta, M.1
Coggill, P.C.2
Eberhardt, R.Y.3
Mistry, J.4
Tate, J.5
Boursnell, C.6
Pang, N.7
Forslund, K.8
Ceric, G.9
Clements, J.10
-
105
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
106
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011, 28:2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
107
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson DH, Bryant D. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 2006, 23:254-267.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
108
-
-
0036719929
-
Genome trees and the tree of life
-
Wolf YI, Rogozin IB, Grishin NV, Koonin EV. Genome trees and the tree of life. Trends Genet 2002, 18:472-479.
-
(2002)
Trends Genet
, vol.18
, pp. 472-479
-
-
Wolf, Y.I.1
Rogozin, I.B.2
Grishin, N.V.3
Koonin, E.V.4
|