메뉴 건너뛰기




Volumn 34, Issue 1, 2013, Pages 102-108

DNA methylation profiling in breast cancer discordant identical twins identifies DOK7 as novel epigenetic biomarker

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MARKER; DOCKING PROTEIN; PROTEIN DOK7; UNCLASSIFIED DRUG;

EID: 84872132897     PISSN: 01433334     EISSN: 14602180     Source Type: Journal    
DOI: 10.1093/carcin/bgs321     Document Type: Article
Times cited : (128)

References (41)
  • 1
    • 0034607234 scopus 로고    scopus 로고
    • Promoter hypermethylation and BRCA1 inactivation in sporadic breast and ovarian tumors
    • Esteller, M. et al. (2000) Promoter hypermethylation and BRCA1 inactivation in sporadic breast and ovarian tumors. J. Natl. Cancer Inst., 92, 564-569.
    • (2000) J. Natl. Cancer Inst. , vol.92 , pp. 564-569
    • Esteller, M.1
  • 2
    • 79957562586 scopus 로고    scopus 로고
    • CpG island hypermethylation of BRCA1 and loss of pRb as co-occurring events in basal/triple-negative breast cancer
    • Stefansson, O.A. et al. (2011) CpG island hypermethylation of BRCA1 and loss of pRb as co-occurring events in basal/triple-negative breast cancer. Epigenetics, 6, 638-649.
    • (2011) Epigenetics , vol.6 , pp. 638-649
    • Stefansson, O.A.1
  • 3
    • 33745956231 scopus 로고    scopus 로고
    • Epigenetic silencing and deletion of the BRCA1 gene in sporadic breast cancer
    • Birgisdottir, V. et al. (2006) Epigenetic silencing and deletion of the BRCA1 gene in sporadic breast cancer. Breast Cancer Res., 8, R38.
    • (2006) Breast Cancer Res , vol.8
    • Birgisdottir, V.1
  • 4
    • 67650471685 scopus 로고    scopus 로고
    • Inhibition of poly(ADP-ribose) polymerase in tumors from BRCA mutation carriers
    • Fong, P.C. et al. (2009) Inhibition of poly(ADP-ribose) polymerase in tumors from BRCA mutation carriers. N. Engl. J. Med., 361, 123-134.
    • (2009) N. Engl. J. Med. , vol.361 , pp. 123-134
    • Fong, P.C.1
  • 5
    • 78751629661 scopus 로고    scopus 로고
    • BRCA1 CpG island hypermethylation predicts sensitivity to poly(adenosine diphosphate)-ribose polymerase inhibitors
    • author reply e565
    • Veeck, J. et al. (2010) BRCA1 CpG island hypermethylation predicts sensitivity to poly(adenosine diphosphate)-ribose polymerase inhibitors. J. Clin. Oncol., 28, e563-4; author reply e565.
    • (2010) J. Clin. Oncol , vol.28
    • Veeck, J.1
  • 6
    • 77949908546 scopus 로고    scopus 로고
    • Efficacy of neoadjuvant cisplatin in triple-negative breast cancer
    • Silver, D.P. et al. (2010) Efficacy of neoadjuvant cisplatin in triple-negative breast cancer. J. Clin. Oncol., 28, 1145-1153.
    • (2010) J. Clin. Oncol. , vol.28 , pp. 1145-1153
    • Silver, D.P.1
  • 7
    • 33947315736 scopus 로고    scopus 로고
    • Cancer epigenomics: DNA methylomes and histonemodification maps
    • Esteller, M. (2007) Cancer epigenomics: DNA methylomes and histonemodification maps. Nat. Rev. Genet., 8, 286-298.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 286-298
    • Esteller, M.1
  • 8
    • 84856528270 scopus 로고    scopus 로고
    • Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
    • Hon, G.C. et al. (2012) Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer. Genome Res., 22, 246-258.
    • (2012) Genome Res , vol.22 , pp. 246-258
    • Hon, G.C.1
  • 9
    • 40849139208 scopus 로고    scopus 로고
    • Epigenetics in cancer
    • Esteller, M. (2008) Epigenetics in cancer. N. Engl. J. Med., 358, 1148-1159.
    • (2008) N. Engl. J. Med. , vol.358 , pp. 1148-1159
    • Esteller, M.1
  • 10
    • 79960688508 scopus 로고    scopus 로고
    • DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines
    • Bell, J.T. et al. (2011) DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines. Genome Biol., 12, R10.
    • (2011) Genome Biol , vol.12
    • Bell, J.T.1
  • 11
    • 84860572791 scopus 로고    scopus 로고
    • Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population
    • Bell, J.T. et al. (2012) Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population. PLoS Genetics, 8, e1002629.
    • (2012) PLoS Genetics , vol.8
    • Bell, J.T.1
  • 12
    • 79952104806 scopus 로고    scopus 로고
    • A twin approach to unraveling epigenetics
    • Bell, J.T. et al. (2011) A twin approach to unraveling epigenetics. Trends Genet., 27, 116-125.
    • (2011) Trends Genet , vol.27 , pp. 116-125
    • Bell, J.T.1
  • 13
    • 79958754527 scopus 로고    scopus 로고
    • Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome
    • Sandoval, J. et al. (2011) Validation of a DNA methylation microarray for 450, 000 CpG sites in the human genome. Epigenetics, 6, 692-702.
    • (2011) Epigenetics , vol.6 , pp. 692-702
    • Sandoval, J.1
  • 14
    • 80053304450 scopus 로고    scopus 로고
    • High density DNA methylation array with single CpG site resolution
    • Bibikova, M. et al. (2011) High density DNA methylation array with single CpG site resolution. Genomics, 98, 288-295.
    • (2011) Genomics , vol.98 , pp. 288-295
    • Bibikova, M.1
  • 15
    • 80053457972 scopus 로고    scopus 로고
    • Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis
    • Rakyan, V.K. et al. (2011) Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis. PLoS Genet., 7, e1002300.
    • (2011) PLoS Genet , vol.7
    • Rakyan, V.K.1
  • 16
    • 75649151209 scopus 로고    scopus 로고
    • Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus
    • Javierre, B.M. et al. (2010) Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus. Genome Res., 20, 170-179.
    • (2010) Genome Res , vol.20 , pp. 170-179
    • Javierre, B.M.1
  • 17
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini, Y. et al. (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Statist Soc. B, 57, 289-300.
    • (1995) J. R. Statist Soc. B , vol.57 , pp. 289-300
    • Benjamini, Y.1
  • 19
    • 77954269901 scopus 로고    scopus 로고
    • The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
    • Warde-Farley, D. et al. (2010) The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function. Nucleic Acids Res., 38, W214-W220.
    • (2010) Nucleic Acids Res , vol.38
    • Warde-Farley, D.1
  • 20
    • 64549104807 scopus 로고    scopus 로고
    • ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks
    • Bindea, G. et al. (2009) ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks. Bioinformatics, 25, 1091-1093.
    • (2009) Bioinformatics , vol.25 , pp. 1091-1093
    • Bindea, G.1
  • 21
    • 59149084538 scopus 로고    scopus 로고
    • The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
    • Irizarry, R.A. et al. (2009) The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. Nat. Genet., 41, 178-186.
    • (2009) Nat. Genet. , vol.41 , pp. 178-186
    • Irizarry, R.A.1
  • 22
    • 70649095120 scopus 로고    scopus 로고
    • Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts
    • Doi, A. et al. (2009) Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts. Nat. Genet., 41, 1350-1353.
    • (2009) Nat. Genet. , vol.41 , pp. 1350-1353
    • Doi, A.1
  • 23
    • 34250001297 scopus 로고    scopus 로고
    • A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer
    • Hunter, D.J. et al. (2007) A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer. Nat. Genet., 39, 870-874.
    • (2007) Nat. Genet. , vol.39 , pp. 870-874
    • Hunter, D.J.1
  • 24
    • 1542515338 scopus 로고    scopus 로고
    • A census of human cancer genes
    • Futreal, P.A. et al. (2004) A census of human cancer genes. Nat. Rev. Cancer, 4, 177-183
    • (2004) Nat. Rev. Cancer , vol.4 , pp. 177-183
    • Futreal, P.A.1
  • 25
    • 49649112211 scopus 로고    scopus 로고
    • Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer
    • Ito, Y. et al. (2008) Somatically acquired hypomethylation of IGF2 in breast and colorectal cancer. Hum. Mol. Genet., 17, 2633-2643.
    • (2008) Hum. Mol. Genet. , vol.17 , pp. 2633-2643
    • Ito, Y.1
  • 26
    • 38049073696 scopus 로고    scopus 로고
    • Massively parallel bisulphite pyrosequencing reveals the molecular complexity of breast cancer-associated cytosinemethylation patterns obtained from tissue and serum DNA
    • Korshunova, Y. et al. (2008) Massively parallel bisulphite pyrosequencing reveals the molecular complexity of breast cancer-associated cytosinemethylation patterns obtained from tissue and serum DNA. Genome Res., 18, 19-29.
    • (2008) Genome Res , vol.18 , pp. 19-29
    • Korshunova, Y.1
  • 27
    • 84860516671 scopus 로고    scopus 로고
    • Intragenic ATM methylation in peripheral blood DNA as a biomarker of breast cancer risk
    • KConFab Investigators
    • Brennan, K. et al.; KConFab Investigators. (2012) Intragenic ATM methylation in peripheral blood DNA as a biomarker of breast cancer risk. Cancer Res., 72, 2304-2313.
    • (2012) Cancer Res , vol.72 , pp. 2304-2313
    • Brennan, K.1
  • 28
    • 79952264847 scopus 로고    scopus 로고
    • Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
    • Lister, R. et al. (2011) Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells. Nature, 471, 68-73.
    • (2011) Nature , vol.471 , pp. 68-73
    • Lister, R.1
  • 29
    • 70649095120 scopus 로고    scopus 로고
    • Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts
    • Doi, A. et al. (2009) Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts. Nature Genet., 41, 1350-1353.
    • (2009) Nature Genet , vol.41 , pp. 1350-1353
    • Doi, A.1
  • 30
    • 84859910536 scopus 로고    scopus 로고
    • A unique regulatory phase of DNA methylation in the early mammalian embryo
    • Smith, Z.D. et al. (2012) A unique regulatory phase of DNA methylation in the early mammalian embryo. Nature, 484, 339-344.
    • (2012) Nature , vol.484 , pp. 339-344
    • Smith, Z.D.1
  • 31
    • 82855163962 scopus 로고    scopus 로고
    • Genome-scale screen for DNA methylation-based detection markers for ovarian cancer
    • Campan, M. et al. (2011) Genome-scale screen for DNA methylation-based detection markers for ovarian cancer. PLoS ONE, 6, e28141.
    • (2011) PLoS ONE , vol.6
    • Campan, M.1
  • 32
    • 84856555311 scopus 로고    scopus 로고
    • A DNA methylation fingerprint of 1628 human samples
    • Fernandez, A.F. et al. (2012) A DNA methylation fingerprint of 1628 human samples. Genome Res., 22, 407-419.
    • (2012) Genome Res , vol.22 , pp. 407-419
    • Fernandez, A.F.1
  • 33
    • 79960927422 scopus 로고    scopus 로고
    • Increased methylation variation in epigenetic domains across cancer types
    • Hansen, K.D. et al. (2011) Increased methylation variation in epigenetic domains across cancer types. Nat. Genet., 43, 768-775.
    • (2011) Nat. Genet. , vol.43 , pp. 768-775
    • Hansen, K.D.1
  • 34
    • 0034614637 scopus 로고    scopus 로고
    • The hallmarks of cancer
    • Hanahan, D. et al. (2000) The hallmarks of cancer. Cell, 100, 57-70.
    • (2000) Cell , vol.100 , pp. 57-70
    • Hanahan, D.1
  • 35
    • 80052937538 scopus 로고    scopus 로고
    • Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates
    • Molaro, A. et al. (2011) Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates. Cell, 146, 1029-1041.
    • (2011) Cell , vol.146 , pp. 1029-1041
    • Molaro, A.1
  • 36
    • 80052918929 scopus 로고    scopus 로고
    • Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment
    • Hodges, E. et al. (2011) Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment. Mol. Cell, 44, 17-28.
    • (2011) Mol. Cell , vol.44 , pp. 17-28
    • Hodges, E.1
  • 37
    • 77954252168 scopus 로고    scopus 로고
    • The cytoplasmic adaptor protein Dok7 activates the receptor tyrosine kinase MuSK via dimerization
    • Bergamin, E. et al. (2010) The cytoplasmic adaptor protein Dok7 activates the receptor tyrosine kinase MuSK via dimerization. Mol. Cell, 39, 100-109.
    • (2010) Mol. Cell , vol.39 , pp. 100-109
    • Bergamin, E.1
  • 38
    • 77957850291 scopus 로고    scopus 로고
    • Emerging roles for natural microRNA sponges
    • Ebert, M.S. et al. (2010) Emerging roles for natural microRNA sponges. Curr. Biol., 20, R858-R861.
    • (2010) Curr. Biol. , vol.20
    • Ebert, M.S.1
  • 39
    • 80054700249 scopus 로고    scopus 로고
    • Development of microRNA-145 for therapeutic application in breast cancer
    • Kim, S.J. et al. (2011) Development of microRNA-145 for therapeutic application in breast cancer. J. Control. Release, 155, 427-434.
    • (2011) J. Control. Release , vol.155 , pp. 427-434
    • Kim, S.J.1
  • 40
    • 75149124701 scopus 로고    scopus 로고
    • MicroRNA-145 suppresses cell invasion and metastasis by directly targeting mucin 1
    • Sachdeva, M. et al. (2010) MicroRNA-145 suppresses cell invasion and metastasis by directly targeting mucin 1. Cancer Res., 70, 378-387.
    • (2010) Cancer Res , vol.70 , pp. 378-387
    • Sachdeva, M.1
  • 41
    • 23844555119 scopus 로고    scopus 로고
    • MicroRNA gene expression deregulation in human breast cancer
    • Iorio, M.V. et al. (2005) MicroRNA gene expression deregulation in human breast cancer. Cancer Res., 65, 7065-7070.
    • (2005) Cancer Res , vol.65 , pp. 7065-7070
    • Iorio, M.V.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.