메뉴 건너뛰기




Volumn 73, Issue 1, 2013, Pages 256-264

Genome-wide association study reveals novel genetic determinants of DNA repair capacity in lung cancer

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 84871965695     PISSN: 00085472     EISSN: 15387445     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-12-1915     Document Type: Article
Times cited : (43)

References (49)
  • 2
    • 0035866383 scopus 로고    scopus 로고
    • Sensitivity to DNA damage induced by benzo(a)pyrene diol epoxide and risk of lung cancer: A case-control analysis
    • Li D, Firozi PF, Wang LE, Bosken CH, Spitz MR, Hong WK, et al. Sensitivity to DNA damage induced by benzo(a)pyrene diol epoxide and risk of lung cancer: a case-control analysis. Cancer Res 2001;61:1445-50.
    • (2001) Cancer Res , vol.61 , pp. 1445-1450
    • Li, D.1    Firozi, P.F.2    Wang, L.E.3    Bosken, C.H.4    Spitz, M.R.5    Hong, W.K.6
  • 3
    • 0021934273 scopus 로고
    • Interactions of benzo(a)pyrene diol-epoxides with linear and supercoiled DNA
    • MacLeod MC, Tang MS. Interactions of benzo(a)pyrene diol-epoxides with linear and supercoiled DNA. Cancer Res 1985;45:51-6.
    • (1985) Cancer Res , vol.45 , pp. 51-56
    • MacLeod, M.C.1    Tang, M.S.2
  • 4
    • 0019074870 scopus 로고
    • Benzo[alpha]pyrene metabolism, activation and carcinogenesis: Role and regulation of mixed-function oxidases and related enzymes
    • Gelboin HV. Benzo[alpha]pyrene metabolism, activation and carcinogenesis: role and regulation of mixed-function oxidases and related enzymes. Physiol Rev 1980;60:1107-66.
    • (1980) Physiol Rev , vol.60 , pp. 1107-1166
    • Gelboin, H.V.1
  • 5
    • 0020523616 scopus 로고
    • Fifty years of benzo(a)pyrene
    • Phillips DH. Fifty years of benzo(a)pyrene. Nature 1983;303:468-72.
    • (1983) Nature , vol.303 , pp. 468-472
    • Phillips, D.H.1
  • 6
    • 0026768376 scopus 로고
    • Differences and similarities in the repair of two benzo[a]pyrene diol epoxide isomers induced DNA adducts by uvrA, uvrB, and uvrC gene products
    • Mosc
    • Tang MS, Pierce JR, Doisy RP, Nazimiec ME, MacLeod MC. Differences and similarities in the repair of two benzo[a]pyrene diol epoxide isomers induced DNA adducts by uvrA, uvrB, and uvrC gene products. Biochemistry (Mosc) 1992;31:8429-36.
    • (1992) Biochemistry , vol.31 , pp. 8429-8436
    • Tang, M.S.1    Pierce, J.R.2    Doisy, R.P.3    Nazimiec, M.E.4    MacLeod, M.C.5
  • 7
    • 0029618266 scopus 로고
    • DNA repair in humans
    • Sancar A. DNA repair in humans. Annu Rev Genet 1995;29:69-105.
    • (1995) Annu Rev Genet , vol.29 , pp. 69-105
    • Sancar, A.1
  • 8
    • 0031903666 scopus 로고    scopus 로고
    • Repair of DNA lesions induced by polycyclic aromatic hydrocarbons in human cell-free extracts: Involvement of two excision repair mechanisms in vitro
    • Braithwaite E, Wu X, Wang Z. Repair of DNA lesions induced by polycyclic aromatic hydrocarbons in human cell-free extracts: involvement of two excision repair mechanisms in vitro. Carcinogenesis 1998;19:1239-46.
    • (1998) Carcinogenesis , vol.19 , pp. 1239-1246
    • Braithwaite, E.1    Wu, X.2    Wang, Z.3
  • 10
    • 45849150693 scopus 로고    scopus 로고
    • The risk of death by age, sex, and smoking status in the United States: Putting health risks in context
    • Woloshin S, Schwartz LM, Welch HG. The risk of death by age, sex, and smoking status in the United States: putting health risks in context. J Natl Cancer Inst 2008;100:845-53.
    • (2008) J Natl Cancer Inst , vol.100 , pp. 845-853
    • Woloshin, S.1    Schwartz, L.M.2    Welch, H.G.3
  • 11
    • 0026240006 scopus 로고
    • Relevance of metabolic polymorphisms to human carcinogenesis: Evaluation of epidemiologic evidence
    • Caporaso N, Landi MT, Vineis P. Relevance of metabolic polymorphisms to human carcinogenesis: evaluation of epidemiologic evidence. Pharmacogenetics 1991;1:4-19.
    • (1991) Pharmacogenetics , vol.1 , pp. 4-19
    • Caporaso, N.1    Landi, M.T.2    Vineis, P.3
  • 13
    • 0030668586 scopus 로고    scopus 로고
    • The role of DNA repair capacity in susceptibility to lung cancer: A review
    • Wei Q, Spitz MR. The role of DNA repair capacity in susceptibility to lung cancer: a review. Cancer Metastasis Rev 1997;16:295-307.
    • (1997) Cancer Metastasis Rev , vol.16 , pp. 295-307
    • Wei, Q.1    Spitz, M.R.2
  • 14
    • 14144254346 scopus 로고    scopus 로고
    • Individual susceptibility to occupational carcinogens: The evidence from biomonitoring and molecular epidemiology studies
    • Pavanello S, Clonfero E. [Individual susceptibility to occupational carcinogens: the evidence from biomonitoring and molecular epidemiology studies]. G Ital Med Lav Ergon 2004;26:311-21.
    • (2004) G Ital Med Lav Ergon , vol.26 , pp. 311-321
    • Pavanello, S.1    Clonfero, E.2
  • 16
    • 0034332586 scopus 로고    scopus 로고
    • Repair of tobacco carcinogen-induced DNA adducts and lung cancer risk: A molecular epidemiologic study
    • Wei Q, Cheng L, Amos CI, Wang LE, Guo Z, Hong WK, et al. Repair of tobacco carcinogen-induced DNA adducts and lung cancer risk: a molecular epidemiologic study. J Natl Cancer Inst 2000;92:1764-72.
    • (2000) J Natl Cancer Inst , vol.92 , pp. 1764-1772
    • Wei, Q.1    Cheng, L.2    Amos, C.I.3    Wang, L.E.4    Guo, Z.5    Hong, W.K.6
  • 17
    • 0029832418 scopus 로고    scopus 로고
    • Reduced DNA repair capacity in lung cancer patients
    • Wei Q, Cheng L, Hong WK, Spitz MR. Reduced DNA repair capacity in lung cancer patients. Cancer Res 1996;56:4103-7.
    • (1996) Cancer Res , vol.56 , pp. 4103-4107
    • Wei, Q.1    Cheng, L.2    Hong, W.K.3    Spitz, M.R.4
  • 18
    • 0037202596 scopus 로고    scopus 로고
    • Rapid assessment of repair of ultraviolet DNA damage with a modified host-cell reactivation assay using a luciferase reporter gene and correlation with polymorphisms of DNA repair genes in normal human lymphocytes
    • Qiao Y, Spitz MR, Guo Z, Hadeyati M, Grossman L, Kraemer KH, et al. Rapid assessment of repair of ultraviolet DNA damage with a modified host-cell reactivation assay using a luciferase reporter gene and correlation with polymorphisms of DNA repair genes in normal human lymphocytes. Mutat Res 2002;509:165-74.
    • (2002) Mutat Res , vol.509 , pp. 165-174
    • Qiao, Y.1    Spitz, M.R.2    Guo, Z.3    Hadeyati, M.4    Grossman, L.5    Kraemer, K.H.6
  • 19
    • 0036122950 scopus 로고    scopus 로고
    • Modulation of repair of ultraviolet damage in the host-cell reactivation assay by polymorphic XPC and XPD/ERCC2 genotypes
    • Qiao Y, Spitz MR, Shen H, Guo Z, Shete S, Hedayati M, et al. Modulation of repair of ultraviolet damage in the host-cell reactivation assay by polymorphic XPC and XPD/ERCC2 genotypes. Carcinogenesis 2002;23:295-9.
    • (2002) Carcinogenesis , vol.23 , pp. 295-299
    • Qiao, Y.1    Spitz, M.R.2    Shen, H.3    Guo, Z.4    Shete, S.5    Hedayati, M.6
  • 21
    • 42649091460 scopus 로고    scopus 로고
    • Genome-wide association scan of tag SNPs identifies a susceptibility locus for lung cancer at 15q25.1
    • Amos CI, Wu X, Broderick P, Gorlov IP, Gu J, Eisen T, et al. Genome-wide association scan of tag SNPs identifies a susceptibility locus for lung cancer at 15q25.1. Nat Genet 2008;40:616-22.
    • (2008) Nat Genet , vol.40 , pp. 616-622
    • Amos, C.I.1    Wu, X.2    Broderick, P.3    Gorlov, I.P.4    Gu, J.5    Eisen, T.6
  • 22
    • 0029833739 scopus 로고    scopus 로고
    • Fluorescence in situ hybridization method for measuring transfection efficiency
    • Cheng L, Bucana CD, Wei Q. Fluorescence in situ hybridization method for measuring transfection efficiency. Biotechniques 1996;21:486-91.
    • (1996) Biotechniques , vol.21 , pp. 486-491
    • Cheng, L.1    Bucana, C.D.2    Wei, Q.3
  • 24
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • Barrett JC, Fry B, Maller J, Daly MJ. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005;21:263-5.
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 26
    • 78650155713 scopus 로고    scopus 로고
    • SNPexp - A web tool for calculating and visualizing correlation between HapMap genotypes and gene expression levels
    • Holm K, Melum E, Franke A, Karlsen TH. SNPexp - A web tool for calculating and visualizing correlation between HapMap genotypes and gene expression levels. BMC Bioinformatics 2010;11:600.
    • (2010) BMC Bioinformatics , vol.11 , pp. 600
    • Holm, K.1    Melum, E.2    Franke, A.3    Karlsen, T.H.4
  • 28
    • 0035495386 scopus 로고    scopus 로고
    • How nucleotide excision repair protects against cancer
    • Friedberg EC. How nucleotide excision repair protects against cancer. Nat Rev Cancer 2001;1:22-33.
    • (2001) Nat Rev Cancer , vol.1 , pp. 22-33
    • Friedberg, E.C.1
  • 29
    • 0032519766 scopus 로고    scopus 로고
    • Nonconservative amino acid substitution variants exist at polymorphic frequency in DNA repair genes in healthy humans
    • Shen MR, Jones IM, Mohrenweiser H. Nonconservative amino acid substitution variants exist at polymorphic frequency in DNA repair genes in healthy humans. Cancer Res 1998;58:604-8.
    • (1998) Cancer Res , vol.58 , pp. 604-608
    • Shen, M.R.1    Jones, I.M.2    Mohrenweiser, H.3
  • 30
    • 77956265066 scopus 로고    scopus 로고
    • ERCC2/XPD Lys751Gln and Asp312Asn gene polymorphism and lung cancer risk: A meta-analysis involving 22 case-control studies
    • Zhan P, Wang Q, Wei SZ, Wang J, Qian Q, Yu LK, et al. ERCC2/XPD Lys751Gln and Asp312Asn gene polymorphism and lung cancer risk: a meta-analysis involving 22 case-control studies. J Thorac Oncol 2010;5:1337-45.
    • (2010) J Thorac Oncol , vol.5 , pp. 1337-1345
    • Zhan, P.1    Wang, Q.2    Wei, S.Z.3    Wang, J.4    Qian, Q.5    Yu, L.K.6
  • 31
    • 78651088836 scopus 로고    scopus 로고
    • ERCC2/XPD polymorphisms and lung cancer risk
    • Christiani DC. ERCC2/XPD polymorphisms and lung cancer risk. J Thorac Oncol 2011;6:233.
    • (2011) J Thorac Oncol , vol.6 , pp. 233
    • Christiani, D.C.1
  • 34
    • 0026779540 scopus 로고
    • Oxidative stress and heat shock induce a human gene encoding a protein-tyrosinephosphatase
    • Keyse SM, Emslie EA. Oxidative stress and heat shock induce a human gene encoding a protein-tyrosinephosphatase. Nature 1992;359:644-7.
    • (1992) Nature , vol.359 , pp. 644-647
    • Keyse, S.M.1    Emslie, E.A.2
  • 35
    • 0027358722 scopus 로고
    • MKP-1 (3CH134), an immediate early gene product, is a dual specificity phosphatase that dephosphorylates MAP kinase in vivo
    • Sun H, Charles CH, Lau LF, Tonks NK. MKP-1 (3CH134), an immediate early gene product, is a dual specificity phosphatase that dephosphorylates MAP kinase in vivo. Cell 1993;75:487-93.
    • (1993) Cell , vol.75 , pp. 487-493
    • Sun, H.1    Charles, C.H.2    Lau, L.F.3    Tonks, N.K.4
  • 36
    • 13744250657 scopus 로고    scopus 로고
    • DNA repair capacity of lymphoblastoid cell lines from sisters discordant for breast cancer
    • Kennedy DO, Agrawal M, Shen J, Terry MB, Zhang FF, Senie RT, et al. DNA repair capacity of lymphoblastoid cell lines from sisters discordant for breast cancer. J Natl Cancer Inst 2005;97:127-32.
    • (2005) J Natl Cancer Inst , vol.97 , pp. 127-132
    • Kennedy, D.O.1    Agrawal, M.2    Shen, J.3    Terry, M.B.4    Zhang, F.F.5    Senie, R.T.6
  • 37
    • 49349096351 scopus 로고    scopus 로고
    • Double-strand breaks repair in lymphoblastoid cell lines from sisters discordant for breast cancer from the New York site of the BCFR
    • Machella N, Terry MB, Zipprich J, Gurvich I, Liao Y, Senie RT, et al. Double-strand breaks repair in lymphoblastoid cell lines from sisters discordant for breast cancer from the New York site of the BCFR. Carcinogenesis 2008;29:1367-72.
    • (2008) Carcinogenesis , vol.29 , pp. 1367-1372
    • Machella, N.1    Terry, M.B.2    Zipprich, J.3    Gurvich, I.4    Liao, Y.5    Senie, R.T.6
  • 38
    • 0029741259 scopus 로고    scopus 로고
    • In vitro induction of benzo(a)pyrene diol epoxide-DNA adducts in peripheral lymphocytes as a susceptibility marker for human lung cancer
    • Li D, Wang M, Cheng L, Spitz MR, Hittelman WN, Wei Q. In vitro induction of benzo(a)pyrene diol epoxide-DNA adducts in peripheral lymphocytes as a susceptibility marker for human lung cancer. Cancer Res 1996;56:3638-41.
    • (1996) Cancer Res , vol.56 , pp. 3638-3641
    • Li, D.1    Wang, M.2    Cheng, L.3    Spitz, M.R.4    Hittelman, W.N.5    Wei, Q.6
  • 39
    • 34548084240 scopus 로고    scopus 로고
    • DNA double-strand break repair capacity and risk of breast cancer
    • Bau DT, Mau YC, Ding SL, Wu PE, Shen CY. DNA double-strand break repair capacity and risk of breast cancer. Carcinogenesis 2007;28:1726-30.
    • (2007) Carcinogenesis , vol.28 , pp. 1726-1730
    • Bau, D.T.1    Mau, Y.C.2    Ding, S.L.3    Wu, P.E.4    Shen, C.Y.5
  • 40
    • 3142695504 scopus 로고    scopus 로고
    • Breast cancer risk and the DNA double-strand break end-joining capacity of nonhomologous end-joining genes are affected by BRCA1
    • Bau DT, Fu YP, Chen ST, Cheng TC, Yu JC, Wu PE, et al. Breast cancer risk and the DNA double-strand break end-joining capacity of nonhomologous end-joining genes are affected by BRCA1. Cancer Res 2004;64:5013-9.
    • (2004) Cancer Res , vol.64 , pp. 5013-5019
    • Bau, D.T.1    Fu, Y.P.2    Chen, S.T.3    Cheng, T.C.4    Yu, J.C.5    Wu, P.E.6
  • 42
    • 74549149963 scopus 로고    scopus 로고
    • Reduced DNA repair capacity for removing tobacco carcinogen-induced DNA adducts contributes to risk of head and neck cancer but not tumor characteristics
    • Wang LE, Hu Z, Sturgis EM, Spitz MR, Strom SS, Amos CI, et al. Reduced DNA repair capacity for removing tobacco carcinogen-induced DNA adducts contributes to risk of head and neck cancer but not tumor characteristics. Clin Cancer Res 2010;16:764-74.
    • (2010) Clin Cancer Res , vol.16 , pp. 764-774
    • Wang, L.E.1    Hu, Z.2    Sturgis, E.M.3    Spitz, M.R.4    Strom, S.S.5    Amos, C.I.6
  • 43
    • 34547781791 scopus 로고    scopus 로고
    • A modified host-cell reactivation assay to measure repair of alkylating DNA damage for assessing risk of lung adenocarcinoma
    • Wang L, Wei Q, Shi Q, Guo Z, Qiao Y, Spitz MR. A modified host-cell reactivation assay to measure repair of alkylating DNA damage for assessing risk of lung adenocarcinoma. Carcinogenesis 2007;28:1430-6.
    • (2007) Carcinogenesis , vol.28 , pp. 1430-1436
    • Wang, L.1    Wei, Q.2    Shi, Q.3    Guo, Z.4    Qiao, Y.5    Spitz, M.R.6
  • 44
    • 35948952401 scopus 로고    scopus 로고
    • Repair capacity for UV light induced DNA damage associated with risk of nonmelanoma skin cancer and tumor progression
    • Wang LE, Li C, Strom SS, Goldberg LH, Brewster A, Guo Z, et al. Repair capacity for UV light induced DNA damage associated with risk of nonmelanoma skin cancer and tumor progression. Clin Cancer Res 2007;13:6532-9.
    • (2007) Clin Cancer Res , vol.13 , pp. 6532-6539
    • Wang, L.E.1    Li, C.2    Strom, S.S.3    Goldberg, L.H.4    Brewster, A.5    Guo, Z.6
  • 45
    • 4544388821 scopus 로고    scopus 로고
    • Reduced DNA repair of benzo[a]pyrene diol epoxide-induced adducts and common XPD polymorphisms in breast cancer patients
    • Shi Q, Wang LE, Bondy ML, Brewster A, Singletary SE, Wei Q. Reduced DNA repair of benzo[a]pyrene diol epoxide-induced adducts and common XPD polymorphisms in breast cancer patients. Carcinogenesis 2004;25:1695-700.
    • (2004) Carcinogenesis , vol.25 , pp. 1695-1700
    • Shi, Q.1    Wang, L.E.2    Bondy, M.L.3    Brewster, A.4    Singletary, S.E.5    Wei, Q.6
  • 46
    • 0035866403 scopus 로고    scopus 로고
    • Modulation of nucleotide excision repair capacity by XPD polymorphisms in lung cancer patients
    • Spitz MR, Wu X, Wang Y, Wang LE, Shete S, Amos CI, et al. Modulation of nucleotide excision repair capacity by XPD polymorphisms in lung cancer patients. Cancer Res 2001;61:1354-7.
    • (2001) Cancer Res , vol.61 , pp. 1354-1357
    • Spitz, M.R.1    Wu, X.2    Wang, Y.3    Wang, L.E.4    Shete, S.5    Amos, C.I.6
  • 48
    • 78751697971 scopus 로고    scopus 로고
    • A genetic variant near the PMAIP1/Noxa gene is associated with increased bleomycin sensitivity
    • Gu J, Ye Y, Spitz MR, Lin J, Kiemeney LA, Xing J, et al. A genetic variant near the PMAIP1/Noxa gene is associated with increased bleomycin sensitivity. Hum Mol Genet 2011;20:820-6.
    • (2011) Hum Mol Genet , vol.20 , pp. 820-826
    • Gu, J.1    Ye, Y.2    Spitz, M.R.3    Lin, J.4    Kiemeney, L.A.5    Xing, J.6
  • 49
    • 84864294222 scopus 로고    scopus 로고
    • The prostate cancer risk locus at 10q11 is associated with DNA repair capacity
    • Amst
    • Rinckleb AE, Surowy HM, Luedeke M, Varga D, Schrader M, Hoegel J, et al. The prostate cancer risk locus at 10q11 is associated with DNA repair capacity. DNA Repair (Amst) 2012;11:693-701.
    • (2012) DNA Repair , vol.11 , pp. 693-701
    • Rinckleb, A.E.1    Surowy, H.M.2    Luedeke, M.3    Varga, D.4    Schrader, M.5    Hoegel, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.