-
2
-
-
84859751408
-
Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato
-
Audran-Delalande C, Bassa C, Mila I, Regad F, Zouine M, Bouzayen M (2012) Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. Plant Cell Physiol 53(4): 659-672.
-
(2012)
Plant Cell Physiol
, vol.53
, Issue.4
, pp. 659-672
-
-
Audran-Delalande, C.1
Bassa, C.2
Mila, I.3
Regad, F.4
Zouine, M.5
Bouzayen, M.6
-
3
-
-
68449094445
-
Forward and reverse genetics to identify genes involved in the age-related resistance response in Arabidopsis thaliana
-
Carviel JL, Al-Daoud F, Neumann M, Mohammad A, Provart NJ, Moeder W, Yoshioka K, Cameron RK (2009) Forward and reverse genetics to identify genes involved in the age-related resistance response in Arabidopsis thaliana. Mol Plant Pathol 10(5): 621-634.
-
(2009)
Mol Plant Pathol
, vol.10
, Issue.5
, pp. 621-634
-
-
Carviel, J.L.1
Al-Daoud, F.2
Neumann, M.3
Mohammad, A.4
Provart, N.J.5
Moeder, W.6
Yoshioka, K.7
Cameron, R.K.8
-
4
-
-
67650869962
-
Epigenetic interaction of OsHDAC1 with the OsNAC6 gene promoter regulates rice root growth
-
Chung PJ, Kim JK (2009) Epigenetic interaction of OsHDAC1 with the OsNAC6 gene promoter regulates rice root growth. Plant Signal Behav 4(7): 675-677.
-
(2009)
Plant Signal Behav
, vol.4
, Issue.7
, pp. 675-677
-
-
Chung, P.J.1
Kim, J.K.2
-
5
-
-
84861109134
-
PLEXdb: gene expression resources for plants and plant pathogens
-
Database issue
-
Dash S, van Hemert J, Hong L, Wise RP, Dickerson JA (2011) PLEXdb: gene expression resources for plants and plant pathogens. Nucleic Acids Res 40(Database issue): D1194-D1201.
-
(2011)
Nucleic Acids Res
, vol.40
-
-
Dash, S.1
van Hemert, J.2
Hong, L.3
Wise, R.P.4
Dickerson, J.A.5
-
6
-
-
33646837363
-
Characterization of a grapevine R2R3-MYB transcription factor that regulates the phenylpropanoid pathway
-
Deluc L, Barrieu F, Marchive C, Lauvergeat V, Decendit A, Richard T, Carde JP, Merillon JM, Hamdi S (2006) Characterization of a grapevine R2R3-MYB transcription factor that regulates the phenylpropanoid pathway. Plant Physiol 140(2): 499-511.
-
(2006)
Plant Physiol
, vol.140
, Issue.2
, pp. 499-511
-
-
Deluc, L.1
Barrieu, F.2
Marchive, C.3
Lauvergeat, V.4
Decendit, A.5
Richard, T.6
Carde, J.P.7
Merillon, J.M.8
Hamdi, S.9
-
7
-
-
0036720107
-
Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily
-
Duval M, Hsieh TF, Kim SY, Thomas TL (2002) Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily. Plant Mol Biol 50(2): 237-248.
-
(2002)
Plant Mol Biol
, vol.50
, Issue.2
, pp. 237-248
-
-
Duval, M.1
Hsieh, T.F.2
Kim, S.Y.3
Thomas, T.L.4
-
8
-
-
67650915748
-
Gene duplication and evolutionary novelty in plants
-
Flagel LE, Wendel JF (2009) Gene duplication and evolutionary novelty in plants. New Phytol 183(3): 557-564.
-
(2009)
New Phytol
, vol.183
, Issue.3
, pp. 557-564
-
-
Flagel, L.E.1
Wendel, J.F.2
-
9
-
-
33646231520
-
AtNAP, a NAC family transcription factor, has an important role in leaf senescence
-
Guo Y, Gan S (2006) AtNAP, a NAC family transcription factor, has an important role in leaf senescence. Plant J 46(4): 601-612.
-
(2006)
Plant J
, vol.46
, Issue.4
, pp. 601-612
-
-
Guo, Y.1
Gan, S.2
-
10
-
-
54449091448
-
GSDS: a gene structure display server
-
Guo AY, Zhu QH, Chen X, Luo JC (2007) [GSDS: a gene structure display server]. Yi Chuan 29(8): 1023-1026.
-
(2007)
Yi Chuan
, vol.29
, Issue.8
, pp. 1023-1026
-
-
Guo, A.Y.1
Zhu, Q.H.2
Chen, X.3
Luo, J.C.4
-
11
-
-
45449087921
-
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
-
Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J (2007) qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol 8: R19.
-
(2007)
Genome Biol
, vol.8
-
-
Hellemans, J.1
Mortier, G.2
de Paepe, A.3
Speleman, F.4
Vandesompele, J.5
-
12
-
-
79959917570
-
Comprehensive analysis of NAC domain transcription factor gene family in Populus trichocarpa
-
Hu R, Qi G, Kong Y, Kong D, Gao Q, Zhou G (2010) Comprehensive analysis of NAC domain transcription factor gene family in Populus trichocarpa. BMC Plant Biol 10: 145.
-
(2010)
BMC Plant Biol
, vol.10
, pp. 145
-
-
Hu, R.1
Qi, G.2
Kong, Y.3
Kong, D.4
Gao, Q.5
Zhou, G.6
-
13
-
-
34848886909
-
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
-
Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, Felice N, Paillard S, Juman I, Moroldo M, Scalabrin S, Canaguier A, Le Clainche I, Malacrida G, Durand E, Pesole G, Laucou V, Chatelet P, Merdinoglu D, Delledonne M, Pezzotti M, Lecharny A, Scarpelli C, Artiguenave F, Pe ME, Valle G, Morgante M, Caboche M, Adam-Blondon AF, Weissenbach J, Quetier F, Wincker P (2007) The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449(7161): 463-467.
-
(2007)
Nature
, vol.449
, Issue.7161
, pp. 463-467
-
-
Jaillon, O.1
Aury, J.M.2
Noel, B.3
Policriti, A.4
Clepet, C.5
Casagrande, A.6
Choisne, N.7
Aubourg, S.8
Vitulo, N.9
Jubin, C.10
Vezzi, A.11
Legeai, F.12
Hugueney, P.13
Dasilva, C.14
Horner, D.15
Mica, E.16
Jublot, D.17
Poulain, J.18
Bruyere, C.19
Billault, A.20
Segurens, B.21
Gouyvenoux, M.22
Ugarte, E.23
Cattonaro, F.24
Anthouard, V.25
Vico, V.26
Del Fabbro, C.27
Alaux, M.28
Di Gaspero, G.29
Dumas, V.30
Felice, N.31
Paillard, S.32
Juman, I.33
Moroldo, M.34
Scalabrin, S.35
Canaguier, A.36
Le Clainche, I.37
Malacrida, G.38
Durand, E.39
Pesole, G.40
Laucou, V.41
Chatelet, P.42
Merdinoglu, D.43
Delledonne, M.44
Pezzotti, M.45
Lecharny, A.46
Scarpelli, C.47
Artiguenave, F.48
Pe, M.E.49
Valle, G.50
Morgante, M.51
Caboche, M.52
Adam-Blondon, A.F.53
Weissenbach, J.54
Quetier, F.55
Wincker, P.56
more..
-
14
-
-
37749020923
-
Membrane-mediated salt stress signaling in flowering time control
-
Kim SG, Park CM (2007) Membrane-mediated salt stress signaling in flowering time control. Plant Signal Behav 2(6): 517-518.
-
(2007)
Plant Signal Behav
, vol.2
, Issue.6
, pp. 517-518
-
-
Kim, S.G.1
Park, C.M.2
-
15
-
-
33846673070
-
Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation
-
Kim SY, Kim SG, Kim YS, Seo PJ, Bae M, Yoon HK, Park CM (2007) Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation. Nucleic Acids Res 35(1): 203-213.
-
(2007)
Nucleic Acids Res
, vol.35
, Issue.1
, pp. 203-213
-
-
Kim, S.Y.1
Kim, S.G.2
Kim, Y.S.3
Seo, P.J.4
Bae, M.5
Yoon, H.K.6
Park, C.M.7
-
16
-
-
34250191497
-
ANAC012, a member of the plant-specific NAC transcription factor family, negatively regulates xylary fiber development in Arabidopsis thaliana
-
Ko JH, Yang SH, Park AH, Lerouxel O, Han KH (2007) ANAC012, a member of the plant-specific NAC transcription factor family, negatively regulates xylary fiber development in Arabidopsis thaliana. Plant J 50(6): 1035-1048.
-
(2007)
Plant J
, vol.50
, Issue.6
, pp. 1035-1048
-
-
Ko, J.H.1
Yang, S.H.2
Park, A.H.3
Lerouxel, O.4
Han, K.H.5
-
17
-
-
80052005755
-
Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress
-
Le DT, Nishiyama R, Watanabe Y, Mochida K, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS (2011) Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress. DNA Res 18(4): 263-276.
-
(2011)
DNA Res
, vol.18
, Issue.4
, pp. 263-276
-
-
Le, D.T.1
Nishiyama, R.2
Watanabe, Y.3
Mochida, K.4
Yamaguchi-Shinozaki, K.5
Shinozaki, K.6
Tran, L.S.7
-
18
-
-
77954500670
-
Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.)
-
Matus JT, Poupin MJ, Canon P, Bordeu E, Alcalde JA, Arce-Johnson P (2010) Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.). Plant Mol Biol 72(6): 607-620.
-
(2010)
Plant Mol Biol
, vol.72
, Issue.6
, pp. 607-620
-
-
Matus, J.T.1
Poupin, M.J.2
Canon, P.3
Bordeu, E.4
Alcalde, J.A.5
Arce-Johnson, P.6
-
19
-
-
0032415864
-
Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process
-
Michelmore RW, Meyers BC (1998) Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process. Genome Res 8(11): 1113-1130.
-
(1998)
Genome Res
, vol.8
, Issue.11
, pp. 1113-1130
-
-
Michelmore, R.W.1
Meyers, B.C.2
-
20
-
-
34547736457
-
Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice
-
Nakashima K, Tran LS, van Nguyen D, Fujita M, Maruyama K, Todaka D, Ito Y, Hayashi N, Shinozaki K, Yamaguchi-Shinozaki K (2007) Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice. Plant J 51(4): 617-630.
-
(2007)
Plant J
, vol.51
, Issue.4
, pp. 617-630
-
-
Nakashima, K.1
Tran, L.S.2
van Nguyen, D.3
Fujita, M.4
Maruyama, K.5
Todaka, D.6
Ito, Y.7
Hayashi, N.8
Shinozaki, K.9
Yamaguchi-Shinozaki, K.10
-
21
-
-
77955579160
-
Genome-wide analysis of NAC transcription factor family in rice
-
Nuruzzaman M, Manimekalai R, Sharoni AM, Satoh K, Kondoh H, Ooka H, Kikuchi S (2010) Genome-wide analysis of NAC transcription factor family in rice. Gene 465(1-2): 30-44.
-
(2010)
Gene
, vol.465
, Issue.1-2
, pp. 30-44
-
-
Nuruzzaman, M.1
Manimekalai, R.2
Sharoni, A.M.3
Satoh, K.4
Kondoh, H.5
Ooka, H.6
Kikuchi, S.7
-
22
-
-
25144511410
-
OsNAC6, a member of the NAC gene family, is induced by various stresses in rice
-
Ohnishi T, Sugahara S, Yamada T, Kikuchi K, Yoshiba Y, Hirano HY, Tsutsumi N (2005) OsNAC6, a member of the NAC gene family, is induced by various stresses in rice. Genes Genet Syst 80(2): 135-139.
-
(2005)
Genes Genet Syst
, vol.80
, Issue.2
, pp. 135-139
-
-
Ohnishi, T.1
Sugahara, S.2
Yamada, T.3
Kikuchi, K.4
Yoshiba, Y.5
Hirano, H.Y.6
Tsutsumi, N.7
-
23
-
-
10744233719
-
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana
-
Ooka H, Satoh K, Doi K, Nagata T, Otomo Y, Murakami K, Matsubara K, Osato N, Kawai J, Carninci P, Hayashizaki Y, Suzuki K, Kojima K, Takahara Y, Yamamoto K, Kikuchi S (2003) Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res 10(6): 239-247.
-
(2003)
DNA Res
, vol.10
, Issue.6
, pp. 239-247
-
-
Ooka, H.1
Satoh, K.2
Doi, K.3
Nagata, T.4
Otomo, Y.5
Murakami, K.6
Matsubara, K.7
Osato, N.8
Kawai, J.9
Carninci, P.10
Hayashizaki, Y.11
Suzuki, K.12
Kojima, K.13
Takahara, Y.14
Yamamoto, K.15
Kikuchi, S.16
-
25
-
-
64549150047
-
Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data
-
Ruijter JM, Ramakers C, Hoogaars WMH, Karlen Y, Bakker O, van den Hoff MJB, Moorman AFM (2009) Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data. Nucleic Acids Res 37: e45.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Ruijter, J.M.1
Ramakers, C.2
Hoogaars, W.M.H.3
Karlen, Y.4
Bakker, O.5
van den Hoff, M.J.B.6
Moorman, A.F.M.7
-
26
-
-
0035032744
-
The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation
-
Takada S, Hibara K, Ishida T, Tasaka M (2001) The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation. Development 128(7): 1127-1135.
-
(2001)
Development
, vol.128
, Issue.7
, pp. 1127-1135
-
-
Takada, S.1
Hibara, K.2
Ishida, T.3
Tasaka, M.4
-
27
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10): 2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, Issue.10
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
28
-
-
67449155835
-
Molecular characterization of stress-inducible GmNAC genes in soybean
-
Tran LS, Quach TN, Guttikonda SK, Aldrich DL, Kumar R, Neelakandan A, Valliyodan B, Nguyen HT (2009) Molecular characterization of stress-inducible GmNAC genes in soybean. Mol Genet Genomics 281(6): 647-664.
-
(2009)
Mol Genet Genomics
, vol.281
, Issue.6
, pp. 647-664
-
-
Tran, L.S.1
Quach, T.N.2
Guttikonda, S.K.3
Aldrich, D.L.4
Kumar, R.5
Neelakandan, A.6
Valliyodan, B.7
Nguyen, H.T.8
-
29
-
-
0038381027
-
The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis
-
Vroemen CW, Mordhorst AP, Albrecht C, Kwaaitaal MA, de Vries SC (2003) The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis. Plant Cell 15(7): 1563-1577.
-
(2003)
Plant Cell
, vol.15
, Issue.7
, pp. 1563-1577
-
-
Vroemen, C.W.1
Mordhorst, A.P.2
Albrecht, C.3
Kwaaitaal, M.A.4
de Vries, S.C.5
-
30
-
-
70249148565
-
The Arabidopsis ATAF1, a NAC transcription factor, is a negative regulator of defense responses against necrotrophic fungal and bacterial pathogens
-
Wang X, Basnayake BM, Zhang H, Li G, Li W, Virk N, Mengiste T, Song F (2009) The Arabidopsis ATAF1, a NAC transcription factor, is a negative regulator of defense responses against necrotrophic fungal and bacterial pathogens. Mol Plant Microbe Interact 22(10): 1227-1238.
-
(2009)
Mol Plant Microbe Interact
, vol.22
, Issue.10
, pp. 1227-1238
-
-
Wang, X.1
Basnayake, B.M.2
Zhang, H.3
Li, G.4
Li, W.5
Virk, N.6
Mengiste, T.7
Song, F.8
-
31
-
-
82555185713
-
Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms
-
Wang Y, Wang X, Tang H, Tan X, Ficklin SP, Feltus FA, Paterson AH (2011) Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms. PLoS ONE 6(12): e28150.
-
(2011)
PLoS ONE
, vol.6
, Issue.12
-
-
Wang, Y.1
Wang, X.2
Tang, H.3
Tan, X.4
Ficklin, S.P.5
Feltus, F.A.6
Paterson, A.H.7
-
32
-
-
84860137835
-
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
-
Wang Y, Tang H, Debarry JD, Tan X, Li J, Wang X, Lee TH, Jin H, Marler B, Guo H, Kissinger JC, Paterson AH (2012) MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity. Nucleic Acids Res.
-
(2012)
Nucleic Acids Res.
-
-
Wang, Y.1
Tang, H.2
Debarry, J.D.3
Tan, X.4
Li, J.5
Wang, X.6
Lee, T.H.7
Jin, H.8
Marler, B.9
Guo, H.10
Kissinger, J.C.11
Paterson, A.H.12
-
33
-
-
38649119496
-
XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem
-
Zhao C, Avci U, Grant EH, Haigler CH, Beers EP (2008) XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem. Plant J 53(3): 425-436.
-
(2008)
Plant J
, vol.53
, Issue.3
, pp. 425-436
-
-
Zhao, C.1
Avci, U.2
Grant, E.H.3
Haigler, C.H.4
Beers, E.P.5
-
34
-
-
84861670540
-
Phylogenetic analyses unravel the evolutionary history of Nac proteins in plants
-
Zhu T, Nevo E, Sun D, Peng J (2012a) Phylogenetic analyses unravel the evolutionary history of Nac proteins in plants. Evolution 66(6): 1833-1848.
-
(2012)
Evolution
, vol.66
, Issue.6
, pp. 1833-1848
-
-
Zhu, T.1
Nevo, E.2
Sun, D.3
Peng, J.4
-
35
-
-
84862794898
-
Isolation and functional characterization of a transcription factor VpNAC1 from Chinese wild Vitis pseudoreticulata
-
Zhu Z, Shi J, He M, Cao J, Wang Y (2012b) Isolation and functional characterization of a transcription factor VpNAC1 from Chinese wild Vitis pseudoreticulata. Biotechnol Lett 34(7): 1335-1342.
-
(2012)
Biotechnol Lett
, vol.34
, Issue.7
, pp. 1335-1342
-
-
Zhu, Z.1
Shi, J.2
He, M.3
Cao, J.4
Wang, Y.5
|