Structure and ecological roles of a novel exopolysaccharide from the Arctic sea ice bacterium Pseudoalteromonas sp. strain SM20310

Applied and Environmental Microbiology

Volumn 79, Issue 1, 2013, Pages 224-230

  Liu, Sheng Bo ^a   Chen, Xiu Lan ^a   He, Hai Lun ^a   Zhang, Xi Ying ^a   Xie, Bin Bin ^a   Yu, Yong ^b   Chen, Bo ^b   Zhou, Bai Chen ^a   Zhang, Yu Zho ^a  

^a SHANDONG UNIVERSITY   (China)

^b POLAR RESEARCH INSTITUTE OF CHINA   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARCTIC SEA ICE; CRYOPROTECTION; EPS PRODUCTION; EXOPOLYSACCHARIDES; FREEZE-THAW CYCLES; HIGH SALINITY; LOW TEMPERATURES; MARINE BACTERIUM; PSEUDOALTEROMONAS; REPEATING UNIT; STRUCTURAL CHARACTERISTICS;

BACTERIA; ECOLOGY; ESCHERICHIA COLI; FREEZING; METABOLITES; SALINITY MEASUREMENT;

SEA ICE;

BACTERIAL POLYSACCHARIDE;

ADAPTATION; BACTERIUM; CRYOPRESERVATION; FREEZE-THAW CYCLE; POLYSACCHARIDE; SALINITY TOLERANCE; SEA ICE; SEA SURFACE SALINITY; SEA SURFACE TEMPERATURE; SECRETION; SURVIVAL;

ARCTIC; ARTICLE; CARBOHYDRATE ANALYSIS; CHEMISTRY; DNA SEQUENCE; DRUG EFFECT; ICE COVER; ISOLATION AND PURIFICATION; METABOLISM; MICROBIAL VIABILITY; MICROBIOLOGY; MOLECULAR GENETICS; MOLECULAR WEIGHT; NUCLEOTIDE SEQUENCE; OSMOTIC PRESSURE; PSEUDOALTEROMONAS; SALINITY;

ARCTIC REGIONS; CARBOHYDRATE SEQUENCE; ICE COVER; MICROBIAL VIABILITY; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; OSMOTIC PRESSURE; POLYSACCHARIDES, BACTERIAL; PSEUDOALTEROMONAS; SALINITY; SEQUENCE ANALYSIS, DNA;

ARCTIC OCEAN;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS SP.;

EID: 84871908011     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01801-12     Document Type: Article

References (29)

1. Mancuso Nichols CA, Guezennec J, Bowman JP. 2005. Bacterial exopolysaccharides from extreme marine environments with special consideration of the southern ocean, sea ice, and deep-sea hydrothermal vents: a review. Mar. Biotechnol. (NY) 7:253-271.
2. Poli A, Anzelmo G, Nicolaus B. 2010. Bacterial exopolysaccharides from extreme marine habitats: production, characterization and biological activities. Mar. Drugs 8:1779-1802.
3. Cambon-Bonavita MA, Raguenes G, Jean J, Vincent P, Guezennec J. 2002. A novel polymer produced by a bacterium isolated from a deep-sea hydrothermal vent polychaete annelid. J. Appl. Microbiol. 93:310-315.
4. Qin G, Zhu L, Chen X, Wang PG, Zhang Y. 2007. Structural characterization and ecological roles of a novel exopolysaccharide from the deepsea psychrotolerant bacterium Pseudoalteromonas sp. SM9913. Microbiology 153:1566-1572.
5. Raguenes G, Cambon-Bonavita MA, Lohier JF, Boisset C, Guezennec J. 2003. A novel, highly viscous polysaccharide excreted by an Alteromonas isolated from a deep-sea hydrothermal vent shrimp. Curr. Microbiol. 46:448-452.
6. Rougeaux H, Guezennec J, Carlson RW, Kervarec N, Pichon R, Talaga P. 1999. Structural determination of the exopolysaccharide of Pseudoalteromonasstrain HYD 721 isolated from a deep-sea hydrothermal vent. Carbohydr. Res. 315:273-285.
7. Rougeaux H, Kervarec N, Pichon R, Guezennec J. 1999. Structure of the exopolysaccharide of Vibrio diabolicus isolated from a deep-sea hydrothermal vent. Carbohydr. Res. 322:40-45.
8. Decho AW. 1990. Microbial exopolymer secretions in ocean environments: their role(s) in food webs and marine processes. Oceanogr. Mar. Biol. Annu. Rev. 28:73-153.
9. Lizotte MP. 2001. The contributions of sea ice algae to Antarctic marine primary production. Am. Zool. 41:57-73.
10. Thomas DN, Dieckmann GS. 2002. Antarctic Sea ice-a habitat for extremophiles. Science 295:641-644.
11. Krembs C, Eicken H, Junge K, Deming JW. 2002. High concentrations of exopolymeric substances in Arctic winter sea ice: implications for the polar ocean carbon cycle and cryoprotection of diatoms. Deep Sea Res.49:2163-2181.
12. Kim SJ, Yim JH. 2007. Cryoprotective properties of exopolysaccharide (P-21653) produced by the Antarctic bacterium, Pseudoalteromonas arctica KOPRI 21653. J. Microbiol. 45:510-514.
13. Junge K, Eicken H, Deming JW. 2004. Bacterial activity at-2 to-20 degrees C in Arctic wintertime sea ice. Appl. Environ. Microbiol. 70:550-557.
14. Mancuso Nichols CA, Lardiere SG, Bowman JP, Nichols PD, Gibson JAE, Guezennec J. 2005. Chemical characterization of exopolysaccharides from Antarctic marine bacteria. Microb. Ecol. 49:578-589.
15. Mancuso Nichols CA, Garon S, Bowman JP, Raguenes G, Guezennec J. 2004. Production of exopolysaccharides by Antarctic marine bacterial isolates. J. Appl. Microbiol. 96:1057-1066.
16. Yu Y, Li H, Zeng Y, Chen B. 2009. Extracellular enzymes of cold-adapted bacteria from Arctic sea ice, Canada Basin. Polar Biol. 32:1539-1547.
17. Freeman DJ, Falkiner FR, Keane CT. 1989. New method for detecting slime production by coagulase negative staphylococci. J. Clin. Pathol. 42:872-874.
18. DuBois M, Gilles KA, Hamilton JK, Rebers PA, Smith F. 1956. Colorimetric method for determination of sugars and related substances. Anal. Chem. 28:350-356.
19. Lane DJ. 1991. 16S/23S rRNA sequencing, p 115-175. In Stackebrandt E, GoodfellowM(ed), Nucleic acid techniques in bacterial systematics. John Wiley&Sons, Chichester, United Kingdom.
20. Staub AM. 1965. Removal of proteins: Sevag method. Methods Carbohydr. Chem. 5:5-6.
21. Merkle RK, Poppe I. 1994. Carbohydrate composition analysis of glycoconjugates by gas-liquid chromatography/mass spectrometry. Methods Enzymol. 230:1-15.
22. York WS, Darvill AG, McNeil M, Stevenson TT, Albersheim P. 1986. Isolation and characterization of plant cell walls and cell wall components. Methods Enzymol. 118:3-40.
23. Ciucanu I, Kerek F. 1984. A simple and rapid method for the permethylation of carbohydrates. Carbohydr. Res. 131:209-217.
24. Bowman JP, McCammon SA, Brown MV, Nichols DS, McMeekin TA. 1997. Diversity and association of psychrophilic bacteria in Antarctic sea ice. Appl. Environ. Microbiol. 63:3068-3078.
25. Brinkmeyer R, Knittel K, Jurgens J, Weyland H, Amann R, Helmke E. 2003. Diversity and structure of bacterial communities in Arctic versus Antarctic pack ice. Appl. Environ. Microbiol. 69:6610-6619.
26. Staley JT, Gosink JJ. 1999. Poles apart: biodiversity and biogeography of sea ice bacteria. Annu. Rev. Microbiol. 53:189-215.
27. Corsaro MM, Lanzetta R, Parrilli E, Parrilli M, Tutino ML, Ummarino S. 2004. Influence of growth temperature on lipid and phosphate contents of surface polysaccharides from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC 125. J. Bacteriol. 186:29-34.
28. Bozzi L, Milas M, Rinaudo M. 1996. Characterization and solution properties of a new exopolysaccharide excreted by the bacterium Alteromonas sp. strain 1644. Int. J. Biol. Macromol. 18:9-17.
29. Selbmann L, Onofri S, Fenice M, Federici F, Petruccioli M. 2002. Production and structural characterization of the exopolysaccharide of the Antarctic fungus Phoma herbarum CCFEE 5080. Res. Microbiol. 153:585-592.