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Volumn 8, Issue 1, 2013, Pages

RNAP-II Molecules Participate in the Anchoring of the ORC to rDNA Replication Origins

Author keywords

[No Author keywords available]

Indexed keywords

CELL CYCLE PROTEIN 6; MESSENGER RNA; ORIGIN RECOGNITION COMPLEX; PROTEIN ORC1P; PROTEIN ORC2P; RIBOSOME DNA; RNA POLYMERASE II; SERINE; UNCLASSIFIED DRUG;

EID: 84871904863     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0053405     Document Type: Article
Times cited : (6)

References (89)
  • 1
    • 41649108908 scopus 로고    scopus 로고
    • Gap junction channels exhibit connexin-specific permeability to cyclic nucleotides
    • Kanaporis G, Mese G, Valiuniene L, White TW, Brink PR, et al. (2008) Gap junction channels exhibit connexin-specific permeability to cyclic nucleotides. J Gen Physiol 131: 293-305.
    • (2008) J Gen Physiol , vol.131 , pp. 293-305
    • Kanaporis, G.1    Mese, G.2    Valiuniene, L.3    White, T.W.4    Brink, P.R.5
  • 3
    • 57349149434 scopus 로고    scopus 로고
    • Genome-wide studies highlight indirect links between human replication origins and gene regulation
    • Cadoret JC, Meisch F, Hassan-Zadeh V, Luyten I, Guillet C, et al. (2008) Genome-wide studies highlight indirect links between human replication origins and gene regulation. Proc Natl Acad Sci U S A 105: 15837-15842.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 15837-15842
    • Cadoret, J.C.1    Meisch, F.2    Hassan-Zadeh, V.3    Luyten, I.4    Guillet, C.5
  • 4
    • 54949085778 scopus 로고    scopus 로고
    • Global reorganization of replication domains during embryonic stem cell differentiation
    • Hiratani I, Ryba T, Itoh M, Yokochi T, Schwaiger M, et al. (2008) Global reorganization of replication domains during embryonic stem cell differentiation. PLoS Biol 6: e245.
    • (2008) PLoS Biol , vol.6
    • Hiratani, I.1    Ryba, T.2    Itoh, M.3    Yokochi, T.4    Schwaiger, M.5
  • 5
    • 34250305146 scopus 로고    scopus 로고
    • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    • Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447: 799-816.
    • (2007) Nature , vol.447 , pp. 799-816
    • Birney, E.1    Stamatoyannopoulos, J.A.2    Dutta, A.3    Guigo, R.4    Gingeras, T.R.5
  • 6
    • 0042329754 scopus 로고    scopus 로고
    • Structure, function and evolution of CpG island promoters
    • Antequera F, (2003) Structure, function and evolution of CpG island promoters. Cell Mol Life Sci 60: 1647-1658.
    • (2003) Cell Mol Life Sci , vol.60 , pp. 1647-1658
    • Antequera, F.1
  • 7
    • 33746101049 scopus 로고    scopus 로고
    • Genome-wide identification of replication origins in yeast by comparative genomics
    • Nieduszynski CA, Knox Y, Donaldson AD, (2006) Genome-wide identification of replication origins in yeast by comparative genomics. Genes Dev 20: 1874-1879.
    • (2006) Genes Dev , vol.20 , pp. 1874-1879
    • Nieduszynski, C.A.1    Knox, Y.2    Donaldson, A.D.3
  • 8
    • 0035861492 scopus 로고    scopus 로고
    • Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins
    • Wyrick JJ, Aparicio JG, Chen T, Barnett JD, Jennings EG, et al. (2001) Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins. Science 294: 2357-2360.
    • (2001) Science , vol.294 , pp. 2357-2360
    • Wyrick, J.J.1    Aparicio, J.G.2    Chen, T.3    Barnett, J.D.4    Jennings, E.G.5
  • 9
    • 0035997368 scopus 로고    scopus 로고
    • DNA replication in eukaryotic cells
    • Bell SP, Dutta A, (2002) DNA replication in eukaryotic cells. Annu Rev Biochem 71: 333-374.
    • (2002) Annu Rev Biochem , vol.71 , pp. 333-374
    • Bell, S.P.1    Dutta, A.2
  • 10
    • 81055138204 scopus 로고    scopus 로고
    • Quality control in the initiation of eukaryotic DNA replication
    • Diffley JF, (2011) Quality control in the initiation of eukaryotic DNA replication. Philos Trans R Soc Lond B Biol Sci 366: 3545-3553.
    • (2011) Philos Trans R Soc Lond B Biol Sci , vol.366 , pp. 3545-3553
    • Diffley, J.F.1
  • 11
    • 4444271170 scopus 로고    scopus 로고
    • A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes
    • Janke C, Magiera MM, Rathfelder N, Taxis C, Reber S, et al. (2004) A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes. Yeast 21: 947-962.
    • (2004) Yeast , vol.21 , pp. 947-962
    • Janke, C.1    Magiera, M.M.2    Rathfelder, N.3    Taxis, C.4    Reber, S.5
  • 12
    • 0038302923 scopus 로고    scopus 로고
    • Replication of the chicken beta-globin locus: early-firing origins at the 5' HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications
    • Prioleau MN, Gendron MC, Hyrien O, (2003) Replication of the chicken beta-globin locus: early-firing origins at the 5' HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications. Mol Cell Biol 23: 3536-3549.
    • (2003) Mol Cell Biol , vol.23 , pp. 3536-3549
    • Prioleau, M.N.1    Gendron, M.C.2    Hyrien, O.3
  • 13
    • 43049152845 scopus 로고    scopus 로고
    • Poised RNA polymerase II gives pause for thought
    • Margaritis T, Holstege FC, (2008) Poised RNA polymerase II gives pause for thought. Cell 133: 581-584.
    • (2008) Cell , vol.133 , pp. 581-584
    • Margaritis, T.1    Holstege, F.C.2
  • 14
    • 33751090746 scopus 로고    scopus 로고
    • Phosphorylation and functions of the RNA polymerase II CTD
    • Phatnani HP, Greenleaf AL, (2006) Phosphorylation and functions of the RNA polymerase II CTD. Genes Dev 20: 2922-2936.
    • (2006) Genes Dev , vol.20 , pp. 2922-2936
    • Phatnani, H.P.1    Greenleaf, A.L.2
  • 16
    • 34347365314 scopus 로고    scopus 로고
    • Phosphorylation of the C-terminal domain of RNA polymerase II plays central roles in the integrated events of eucaryotic gene expression
    • Hirose Y, Ohkuma Y, (2007) Phosphorylation of the C-terminal domain of RNA polymerase II plays central roles in the integrated events of eucaryotic gene expression. J Biochem 141: 601-608.
    • (2007) J Biochem , vol.141 , pp. 601-608
    • Hirose, Y.1    Ohkuma, Y.2
  • 17
    • 0031451166 scopus 로고    scopus 로고
    • Genetics of transcriptional regulation in yeast: connections to the RNA polymerase II CTD
    • Carlson M, (1997) Genetics of transcriptional regulation in yeast: connections to the RNA polymerase II CTD. Annu Rev Cell Dev Biol 13: 1-23.
    • (1997) Annu Rev Cell Dev Biol , vol.13 , pp. 1-23
    • Carlson, M.1
  • 18
    • 70449106028 scopus 로고    scopus 로고
    • Modifications of RNA polymerase II are pivotal in regulating gene expression states
    • Brookes E, Pombo A, (2009) Modifications of RNA polymerase II are pivotal in regulating gene expression states. EMBO Rep 10: 1213-1219.
    • (2009) EMBO Rep , vol.10 , pp. 1213-1219
    • Brookes, E.1    Pombo, A.2
  • 19
    • 0026508417 scopus 로고
    • A yeast chromosomal origin of DNA replication defined by multiple functional elements
    • Marahrens Y, Stillman B, (1992) A yeast chromosomal origin of DNA replication defined by multiple functional elements. Science 255: 817-823.
    • (1992) Science , vol.255 , pp. 817-823
    • Marahrens, Y.1    Stillman, B.2
  • 20
    • 0035890614 scopus 로고    scopus 로고
    • RNA polymerase II and III transcription factors can stimulate DNA replication by modifying origin chromatin structures
    • Bodmer-Glavas M, Edler K, Barberis A, (2001) RNA polymerase II and III transcription factors can stimulate DNA replication by modifying origin chromatin structures. Nucleic Acids Res 29: 4570-4580.
    • (2001) Nucleic Acids Res , vol.29 , pp. 4570-4580
    • Bodmer-Glavas, M.1    Edler, K.2    Barberis, A.3
  • 21
    • 0345346378 scopus 로고    scopus 로고
    • Activation of DNA replication in yeast by recruitment of the RNA polymerase II transcription complex
    • Stagljar I, Hubscher U, Barberis A, (1999) Activation of DNA replication in yeast by recruitment of the RNA polymerase II transcription complex. Biol Chem 380: 525-530.
    • (1999) Biol Chem , vol.380 , pp. 525-530
    • Stagljar, I.1    Hubscher, U.2    Barberis, A.3
  • 22
    • 0036859962 scopus 로고    scopus 로고
    • The role of the carboxyterminal domain of RNA polymerase II in regulating origins of DNA replication in Saccharomyces cerevisiae
    • Gauthier L, Dziak R, Kramer DJ, Leishman D, Song X, et al. (2002) The role of the carboxyterminal domain of RNA polymerase II in regulating origins of DNA replication in Saccharomyces cerevisiae. Genetics 162: 1117-1129.
    • (2002) Genetics , vol.162 , pp. 1117-1129
    • Gauthier, L.1    Dziak, R.2    Kramer, D.J.3    Leishman, D.4    Song, X.5
  • 24
    • 0023903722 scopus 로고
    • Replication program of active and inactive multigene families in mammalian cells
    • Hatton KS, Dhar V, Brown EH, Iqbal MA, Stuart S, et al. (1988) Replication program of active and inactive multigene families in mammalian cells. Mol Cell Biol 8: 2149-2158.
    • (1988) Mol Cell Biol , vol.8 , pp. 2149-2158
    • Hatton, K.S.1    Dhar, V.2    Brown, E.H.3    Iqbal, M.A.4    Stuart, S.5
  • 25
    • 0032784059 scopus 로고    scopus 로고
    • Activation of silent replication origins at autonomously replicating sequence elements near the HML locus in budding yeast
    • Vujcic M, Miller CA, Kowalski D, (1999) Activation of silent replication origins at autonomously replicating sequence elements near the HML locus in budding yeast. Mol Cell Biol 19: 6098-6109.
    • (1999) Mol Cell Biol , vol.19 , pp. 6098-6109
    • Vujcic, M.1    Miller, C.A.2    Kowalski, D.3
  • 26
    • 30444436433 scopus 로고    scopus 로고
    • Transcription factors and DNA replication origin selection
    • Kohzaki H, Murakami Y, (2005) Transcription factors and DNA replication origin selection. Bioessays 27: 1107-1116.
    • (2005) Bioessays , vol.27 , pp. 1107-1116
    • Kohzaki, H.1    Murakami, Y.2
  • 28
    • 84856103786 scopus 로고    scopus 로고
    • Knott SR, Peace JM, Ostrow AZ, Gan Y, Rex AE,et al. Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae
    • Knott SR, Peace JM, Ostrow AZ, Gan Y, Rex AE,et al. Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae. Cell 148: 99-111.
    • Cell , vol.148 , pp. 99-111
  • 29
    • 3142768347 scopus 로고    scopus 로고
    • Chromatin regulates origin activity in Drosophila follicle cells
    • Aggarwal BD, Calvi BR, (2004) Chromatin regulates origin activity in Drosophila follicle cells. Nature 430: 372-376.
    • (2004) Nature , vol.430 , pp. 372-376
    • Aggarwal, B.D.1    Calvi, B.R.2
  • 30
    • 37249069368 scopus 로고    scopus 로고
    • Conservation of epigenetic regulation, ORC binding and developmental timing of DNA replication origins in the genus Drosophila
    • Calvi BR, Byrnes BA, Kolpakas AJ, (2007) Conservation of epigenetic regulation, ORC binding and developmental timing of DNA replication origins in the genus Drosophila. Genetics 177: 1291-1301.
    • (2007) Genetics , vol.177 , pp. 1291-1301
    • Calvi, B.R.1    Byrnes, B.A.2    Kolpakas, A.J.3
  • 31
    • 22144465137 scopus 로고    scopus 로고
    • Promiscuous initiation on mammalian chromosomal DNA templates and its possible suppression by transcription
    • Lin HB, Dijkwel PA, Hamlin JL, (2005) Promiscuous initiation on mammalian chromosomal DNA templates and its possible suppression by transcription. Exp Cell Res 308: 53-64.
    • (2005) Exp Cell Res , vol.308 , pp. 53-64
    • Lin, H.B.1    Dijkwel, P.A.2    Hamlin, J.L.3
  • 32
    • 16244384503 scopus 로고    scopus 로고
    • A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation
    • Kizer KO, Phatnani HP, Shibata Y, Hall H, Greenleaf AL, et al. (2005) A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation. Mol Cell Biol 25: 3305-3316.
    • (2005) Mol Cell Biol , vol.25 , pp. 3305-3316
    • Kizer, K.O.1    Phatnani, H.P.2    Shibata, Y.3    Hall, H.4    Greenleaf, A.L.5
  • 33
    • 0344022572 scopus 로고    scopus 로고
    • Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
    • Ng HH, Robert F, Young RA, Struhl K, (2003) Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity. Mol Cell 11: 709-719.
    • (2003) Mol Cell , vol.11 , pp. 709-719
    • Ng, H.H.1    Robert, F.2    Young, R.A.3    Struhl, K.4
  • 34
    • 67849102169 scopus 로고    scopus 로고
    • The interactions of the largest subunit of RNA polymerase II with other cellular proteins: a bioinformatic approach
    • Shukla A, Natarajan A, Bhaumik S, El-Shemy HA, Lightfoot D, (2009) The interactions of the largest subunit of RNA polymerase II with other cellular proteins: a bioinformatic approach. Curr Issues Mol Biol 11Suppl 1: i65-71.
    • (2009) Curr Issues Mol Biol , vol.11
    • Shukla, A.1    Natarajan, A.2    Bhaumik, S.3    El-Shemy, H.A.4    Lightfoot, D.5
  • 35
    • 0023806623 scopus 로고
    • Organization of replication of ribosomal DNA in Saccharomyces cerevisiae
    • Linskens MH, Huberman JA, (1988) Organization of replication of ribosomal DNA in Saccharomyces cerevisiae. Mol Cell Biol 8: 4927-4935.
    • (1988) Mol Cell Biol , vol.8 , pp. 4927-4935
    • Linskens, M.H.1    Huberman, J.A.2
  • 36
    • 0024291357 scopus 로고
    • A replication fork barrier at the 3' end of yeast ribosomal RNA genes
    • Brewer BJ, Fangman WL, (1988) A replication fork barrier at the 3' end of yeast ribosomal RNA genes. Cell 55: 637-643.
    • (1988) Cell , vol.55 , pp. 637-643
    • Brewer, B.J.1    Fangman, W.L.2
  • 37
    • 37149034478 scopus 로고    scopus 로고
    • Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
    • Houseley J, Kotovic K, El Hage A, Tollervey D, (2007) Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control. Embo J 26: 4996-5006.
    • (2007) Embo J , vol.26 , pp. 4996-5006
    • Houseley, J.1    Kotovic, K.2    El Hage, A.3    Tollervey, D.4
  • 38
    • 78349251644 scopus 로고    scopus 로고
    • Cis-interactions between non-coding ribosomal spacers dependent on RNAP-II separate RNAP-I and RNAP-III transcription domains
    • Mayan M, Aragon L, (2010) Cis-interactions between non-coding ribosomal spacers dependent on RNAP-II separate RNAP-I and RNAP-III transcription domains. Cell Cycle 9: 4328-4337.
    • (2010) Cell Cycle , vol.9 , pp. 4328-4337
    • Mayan, M.1    Aragon, L.2
  • 39
    • 0043172404 scopus 로고    scopus 로고
    • Silencing in yeast rDNA chromatin: reciprocal relationship in gene expression between RNA polymerase I and II
    • Cioci F, Vu L, Eliason K, Oakes M, Siddiqi IN, et al. (2003) Silencing in yeast rDNA chromatin: reciprocal relationship in gene expression between RNA polymerase I and II. Mol Cell 12: 135-145.
    • (2003) Mol Cell , vol.12 , pp. 135-145
    • Cioci, F.1    Vu, L.2    Eliason, K.3    Oakes, M.4    Siddiqi, I.N.5
  • 40
    • 9344225704 scopus 로고    scopus 로고
    • In vivo degradation of RNA polymerase II largest subunit triggered by alpha-amanitin
    • Nguyen VT, Giannoni F, Dubois MF, Seo SJ, Vigneron M, et al. (1996) In vivo degradation of RNA polymerase II largest subunit triggered by alpha-amanitin. Nucleic Acids Res 24: 2924-2929.
    • (1996) Nucleic Acids Res , vol.24 , pp. 2924-2929
    • Nguyen, V.T.1    Giannoni, F.2    Dubois, M.F.3    Seo, S.J.4    Vigneron, M.5
  • 41
    • 3042595545 scopus 로고    scopus 로고
    • Alpha-amanitin blocks translocation by human RNA polymerase II
    • Gong XQ, Nedialkov YA, Burton ZF, (2004) Alpha-amanitin blocks translocation by human RNA polymerase II. J Biol Chem 279: 27422-27427.
    • (2004) J Biol Chem , vol.279 , pp. 27422-27427
    • Gong, X.Q.1    Nedialkov, Y.A.2    Burton, Z.F.3
  • 42
    • 0028978695 scopus 로고
    • Action of alpha-amanitin during pyrophosphorolysis and elongation by RNA polymerase II
    • Chafin DR, Guo H, Price DH, (1995) Action of alpha-amanitin during pyrophosphorolysis and elongation by RNA polymerase II. J Biol Chem 270: 19114-19119.
    • (1995) J Biol Chem , vol.270 , pp. 19114-19119
    • Chafin, D.R.1    Guo, H.2    Price, D.H.3
  • 43
    • 0037022279 scopus 로고    scopus 로고
    • Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution
    • Bushnell DA, Cramer P, Kornberg RD, (2002) Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution. Proc Natl Acad Sci U S A 99: 1218-1222.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 1218-1222
    • Bushnell, D.A.1    Cramer, P.2    Kornberg, R.D.3
  • 44
    • 77957692913 scopus 로고    scopus 로고
    • Drug-induced permeabilization of S. cerevisiae
    • Unit 13 12B
    • Mayan MD (2010) Drug-induced permeabilization of S. cerevisiae. Curr Protoc Mol Biol Chapter 13: Unit 13 12B.
    • (2010) Curr Protoc Mol Biol Chapter , vol.13
    • Mayan, M.D.1
  • 46
    • 33750219783 scopus 로고    scopus 로고
    • CTD kinase I is required for the integrity of the rDNA tandem array
    • Grenetier S, Bouchoux C, Goguel V, (2006) CTD kinase I is required for the integrity of the rDNA tandem array. Nucleic Acids Res 34: 4996-5006.
    • (2006) Nucleic Acids Res , vol.34 , pp. 4996-5006
    • Grenetier, S.1    Bouchoux, C.2    Goguel, V.3
  • 47
    • 0028900584 scopus 로고
    • Transcription-dependent redistribution of the large subunit of RNA polymerase II to discrete nuclear domains
    • Bregman DB, Du L, van der Zee S, Warren SL, (1995) Transcription-dependent redistribution of the large subunit of RNA polymerase II to discrete nuclear domains. J Cell Biol 129: 287-298.
    • (1995) J Cell Biol , vol.129 , pp. 287-298
    • Bregman, D.B.1    Du, L.2    van der Zee, S.3    Warren, S.L.4
  • 49
    • 33646725833 scopus 로고    scopus 로고
    • Splicing speckles are not reservoirs of RNA polymerase II, but contain an inactive form, phosphorylated on serine2 residues of the C-terminal domain
    • Xie SQ, Martin S, Guillot PV, Bentley DL, Pombo A, (2006) Splicing speckles are not reservoirs of RNA polymerase II, but contain an inactive form, phosphorylated on serine2 residues of the C-terminal domain. Mol Biol Cell 17: 1723-1733.
    • (2006) Mol Biol Cell , vol.17 , pp. 1723-1733
    • Xie, S.Q.1    Martin, S.2    Guillot, P.V.3    Bentley, D.L.4    Pombo, A.5
  • 50
    • 0036791653 scopus 로고    scopus 로고
    • Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus
    • Pasero P, Bensimon A, Schwob E, (2002) Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus. Genes Dev 16: 2479-2484.
    • (2002) Genes Dev , vol.16 , pp. 2479-2484
    • Pasero, P.1    Bensimon, A.2    Schwob, E.3
  • 51
    • 33748304113 scopus 로고    scopus 로고
    • Sir2 represses endogenous polymerase II transcription units in the ribosomal DNA nontranscribed spacer
    • Li C, Mueller JE, Bryk M, (2006) Sir2 represses endogenous polymerase II transcription units in the ribosomal DNA nontranscribed spacer. Mol Biol Cell 17: 3848-3859.
    • (2006) Mol Biol Cell , vol.17 , pp. 3848-3859
    • Li, C.1    Mueller, J.E.2    Bryk, M.3
  • 53
    • 0142123203 scopus 로고    scopus 로고
    • Transcription factor and polymerase recruitment, modification, and movement on dhsp70 in vivo in the minutes following heat shock
    • Boehm AK, Saunders A, Werner J, Lis JT, (2003) Transcription factor and polymerase recruitment, modification, and movement on dhsp70 in vivo in the minutes following heat shock. Mol Cell Biol 23: 7628-7637.
    • (2003) Mol Cell Biol , vol.23 , pp. 7628-7637
    • Boehm, A.K.1    Saunders, A.2    Werner, J.3    Lis, J.T.4
  • 54
    • 33845482077 scopus 로고    scopus 로고
    • DNA polymerase epsilon associates with the elongating form of RNA polymerase II and nascent transcripts
    • Rytkonen AK, Hillukkala T, Vaara M, Sokka M, Jokela M, et al. (2006) DNA polymerase epsilon associates with the elongating form of RNA polymerase II and nascent transcripts. FEBS J 273: 5535-5549.
    • (2006) FEBS J , vol.273 , pp. 5535-5549
    • Rytkonen, A.K.1    Hillukkala, T.2    Vaara, M.3    Sokka, M.4    Jokela, M.5
  • 57
    • 15844390393 scopus 로고    scopus 로고
    • A human RNA polymerase II complex associated with SRB and DNA-repair proteins
    • Maldonado E, Shiekhattar R, Sheldon M, Cho H, Drapkin R, et al. (1996) A human RNA polymerase II complex associated with SRB and DNA-repair proteins. Nature 381: 86-89.
    • (1996) Nature , vol.381 , pp. 86-89
    • Maldonado, E.1    Shiekhattar, R.2    Sheldon, M.3    Cho, H.4    Drapkin, R.5
  • 58
    • 17044399754 scopus 로고    scopus 로고
    • Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit
    • Radonjic M, Andrau JC, Lijnzaad P, Kemmeren P, Kockelkorn TT, et al. (2005) Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit. Mol Cell 18: 171-183.
    • (2005) Mol Cell , vol.18 , pp. 171-183
    • Radonjic, M.1    Andrau, J.C.2    Lijnzaad, P.3    Kemmeren, P.4    Kockelkorn, T.T.5
  • 59
    • 23844519339 scopus 로고    scopus 로고
    • A high-resolution map of active promoters in the human genome
    • Kim TH, Barrera LO, Zheng M, Qu C, Singer MA, et al. (2005) A high-resolution map of active promoters in the human genome. Nature 436: 876-880.
    • (2005) Nature , vol.436 , pp. 876-880
    • Kim, T.H.1    Barrera, L.O.2    Zheng, M.3    Qu, C.4    Singer, M.A.5
  • 60
    • 33845212649 scopus 로고    scopus 로고
    • Binding of AlF-C, an Orc1-binding transcriptional regulator, enhances replicator activity of the rat aldolase B origin
    • Minami H, Takahashi J, Suto A, Saitoh Y, Tsutsumi K, (2006) Binding of AlF-C, an Orc1-binding transcriptional regulator, enhances replicator activity of the rat aldolase B origin. Mol Cell Biol 26: 8770-8780.
    • (2006) Mol Cell Biol , vol.26 , pp. 8770-8780
    • Minami, H.1    Takahashi, J.2    Suto, A.3    Saitoh, Y.4    Tsutsumi, K.5
  • 61
    • 0035092886 scopus 로고    scopus 로고
    • DNA replication control through interaction of E2F-RB and the origin recognition complex
    • Bosco G, Du W, Orr-Weaver TL, (2001) DNA replication control through interaction of E2F-RB and the origin recognition complex. Nat Cell Biol 3: 289-295.
    • (2001) Nat Cell Biol , vol.3 , pp. 289-295
    • Bosco, G.1    Du, W.2    Orr-Weaver, T.L.3
  • 62
    • 0347457073 scopus 로고    scopus 로고
    • Role for a Drosophila Myb-containing protein complex in site-specific DNA replication
    • Beall EL, Manak JR, Zhou S, Bell M, Lipsick JS, et al. (2002) Role for a Drosophila Myb-containing protein complex in site-specific DNA replication. Nature 420: 833-837.
    • (2002) Nature , vol.420 , pp. 833-837
    • Beall, E.L.1    Manak, J.R.2    Zhou, S.3    Bell, M.4    Lipsick, J.S.5
  • 63
    • 0027744166 scopus 로고
    • Yeast origin recognition complex functions in transcription silencing and DNA replication
    • Bell SP, Kobayashi R, Stillman B, (1993) Yeast origin recognition complex functions in transcription silencing and DNA replication. Science 262: 1844-1849.
    • (1993) Science , vol.262 , pp. 1844-1849
    • Bell, S.P.1    Kobayashi, R.2    Stillman, B.3
  • 64
    • 0027787870 scopus 로고
    • Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae
    • Foss M, McNally FJ, Laurenson P, Rine J, (1993) Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae. Science 262: 1838-1844.
    • (1993) Science , vol.262 , pp. 1838-1844
    • Foss, M.1    McNally, F.J.2    Laurenson, P.3    Rine, J.4
  • 65
    • 0027515259 scopus 로고
    • Yeast origin recognition complex is involved in DNA replication and transcriptional silencing
    • Micklem G, Rowley A, Harwood J, Nasmyth K, Diffley JF, (1993) Yeast origin recognition complex is involved in DNA replication and transcriptional silencing. Nature 366: 87-89.
    • (1993) Nature , vol.366 , pp. 87-89
    • Micklem, G.1    Rowley, A.2    Harwood, J.3    Nasmyth, K.4    Diffley, J.F.5
  • 66
    • 0029922959 scopus 로고    scopus 로고
    • Role of interactions between the origin recognition complex and SIR1 in transcriptional silencing
    • Triolo T, Sternglanz R, (1996) Role of interactions between the origin recognition complex and SIR1 in transcriptional silencing. Nature 381: 251-253.
    • (1996) Nature , vol.381 , pp. 251-253
    • Triolo, T.1    Sternglanz, R.2
  • 67
    • 0030722744 scopus 로고    scopus 로고
    • Association of the origin recognition complex with heterochromatin and HP1 in higher eukaryotes
    • Pak DT, Pflumm M, Chesnokov I, Huang DW, Kellum R, et al. (1997) Association of the origin recognition complex with heterochromatin and HP1 in higher eukaryotes. Cell 91: 311-323.
    • (1997) Cell , vol.91 , pp. 311-323
    • Pak, D.T.1    Pflumm, M.2    Chesnokov, I.3    Huang, D.W.4    Kellum, R.5
  • 68
    • 0023644253 scopus 로고
    • Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements
    • Shore D, Nasmyth K, (1987) Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements. Cell 51: 721-732.
    • (1987) Cell , vol.51 , pp. 721-732
    • Shore, D.1    Nasmyth, K.2
  • 69
    • 0023797283 scopus 로고
    • Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae
    • Buchman AR, Kimmerly WJ, Rine J, Kornberg RD, (1988) Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae. Mol Cell Biol 8: 210-225.
    • (1988) Mol Cell Biol , vol.8 , pp. 210-225
    • Buchman, A.R.1    Kimmerly, W.J.2    Rine, J.3    Kornberg, R.D.4
  • 70
    • 0030813559 scopus 로고    scopus 로고
    • Mitotic repression of RNA polymerase II transcription is accompanied by release of transcription elongation complexes
    • Parsons GG, Spencer CA, (1997) Mitotic repression of RNA polymerase II transcription is accompanied by release of transcription elongation complexes. Mol Cell Biol 17: 5791-5802.
    • (1997) Mol Cell Biol , vol.17 , pp. 5791-5802
    • Parsons, G.G.1    Spencer, C.A.2
  • 71
    • 0032983948 scopus 로고    scopus 로고
    • Dynamics of RNA polymerase II localization during the cell cycle
    • Dirks RW, Snaar S, (1999) Dynamics of RNA polymerase II localization during the cell cycle. Histochem Cell Biol 111: 405-410.
    • (1999) Histochem Cell Biol , vol.111 , pp. 405-410
    • Dirks, R.W.1    Snaar, S.2
  • 72
    • 0018415180 scopus 로고
    • Quantitative conservation of chromatin-bound RNA polymerases I and II in mitosis. Implications for chromosome structure
    • Matsui SI, Weinfeld H, Sandberg AA, (1979) Quantitative conservation of chromatin-bound RNA polymerases I and II in mitosis. Implications for chromosome structure. J Cell Biol 80: 451-464.
    • (1979) J Cell Biol , vol.80 , pp. 451-464
    • Matsui, S.I.1    Weinfeld, H.2    Sandberg, A.A.3
  • 73
    • 22844435099 scopus 로고    scopus 로고
    • Cell cycle dependent regulation of the origin recognition complex
    • DePamphilis ML, (2005) Cell cycle dependent regulation of the origin recognition complex. Cell Cycle 4: 70-79.
    • (2005) Cell Cycle , vol.4 , pp. 70-79
    • DePamphilis, M.L.1
  • 74
    • 84856133989 scopus 로고    scopus 로고
    • Cdc14 phosphatase promotes segregation of telomeres through repression of RNA polymerase II transcription
    • Clemente-Blanco A, Sen N, Mayan-Santos M, Sacristan MP, Graham B, et al. (2011) Cdc14 phosphatase promotes segregation of telomeres through repression of RNA polymerase II transcription. Nat Cell Biol 13: 1450-1456.
    • (2011) Nat Cell Biol , vol.13 , pp. 1450-1456
    • Clemente-Blanco, A.1    Sen, N.2    Mayan-Santos, M.3    Sacristan, M.P.4    Graham, B.5
  • 75
    • 0028971217 scopus 로고
    • Participation of the human beta-globin locus control region in initiation of DNA replication
    • Aladjem MI, Groudine M, Brody LL, Dieken ES, Fournier RE, et al. (1995) Participation of the human beta-globin locus control region in initiation of DNA replication. Science 270: 815-819.
    • (1995) Science , vol.270 , pp. 815-819
    • Aladjem, M.I.1    Groudine, M.2    Brody, L.L.3    Dieken, E.S.4    Fournier, R.E.5
  • 76
    • 0025107556 scopus 로고
    • A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus
    • Forrester WC, Epner E, Driscoll MC, Enver T, Brice M, et al. (1990) A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus. Genes Dev 4: 1637-1649.
    • (1990) Genes Dev , vol.4 , pp. 1637-1649
    • Forrester, W.C.1    Epner, E.2    Driscoll, M.C.3    Enver, T.4    Brice, M.5
  • 77
    • 0033634725 scopus 로고    scopus 로고
    • Replication of yeast rDNA initiates downstream of transcriptionally active genes
    • Muller M, Lucchini R, Sogo JM, (2000) Replication of yeast rDNA initiates downstream of transcriptionally active genes. Mol Cell 5: 767-777.
    • (2000) Mol Cell , vol.5 , pp. 767-777
    • Muller, M.1    Lucchini, R.2    Sogo, J.M.3
  • 78
    • 4143102539 scopus 로고    scopus 로고
    • rDNA enhancer affects replication initiation and mitotic recombination: Fob1 mediates nucleolytic processing independently of replication
    • Burkhalter MD, Sogo JM, (2004) rDNA enhancer affects replication initiation and mitotic recombination: Fob1 mediates nucleolytic processing independently of replication. Mol Cell 15: 409-421.
    • (2004) Mol Cell , vol.15 , pp. 409-421
    • Burkhalter, M.D.1    Sogo, J.M.2
  • 79
    • 24644499002 scopus 로고    scopus 로고
    • Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats
    • Kobayashi T, Ganley AR, (2005) Recombination regulation by transcription-induced cohesin dissociation in rDNA repeats. Science 309: 1581-1584.
    • (2005) Science , vol.309 , pp. 1581-1584
    • Kobayashi, T.1    Ganley, A.R.2
  • 80
    • 78650186593 scopus 로고    scopus 로고
    • Cohesin organizes chromatin loops at DNA replication factories
    • Guillou E, Ibarra A, Coulon V, Casado-Vela J, Rico D,et al. Cohesin organizes chromatin loops at DNA replication factories. Genes Dev 24: 2812-2822.
    • Genes Dev , vol.24 , pp. 2812-2822
    • Guillou, E.1    Ibarra, A.2    Coulon, V.3    Casado-Vela, J.4    Rico, D.5
  • 81
    • 0022619292 scopus 로고
    • Electron microscopic study of Saccharomyces cerevisiae rDNA chromatin replication
    • Saffer LD, Miller OL Jr, (1986) Electron microscopic study of Saccharomyces cerevisiae rDNA chromatin replication. Mol Cell Biol 6: 1148-1157.
    • (1986) Mol Cell Biol , vol.6 , pp. 1148-1157
    • Saffer, L.D.1    Miller Jr., O.L.2
  • 82
    • 0023646792 scopus 로고
    • The localization of replication origins on ARS plasmids in S. cerevisiae
    • Brewer BJ, Fangman WL, (1987) The localization of replication origins on ARS plasmids in S. cerevisiae. Cell 51: 463-471.
    • (1987) Cell , vol.51 , pp. 463-471
    • Brewer, B.J.1    Fangman, W.L.2
  • 83
    • 33847661809 scopus 로고    scopus 로고
    • Protocol for the fast chromatin immunoprecipitation (ChIP) method
    • Nelson JD, Denisenko O, Bomsztyk K, (2006) Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protoc 1: 179-185.
    • (2006) Nat Protoc , vol.1 , pp. 179-185
    • Nelson, J.D.1    Denisenko, O.2    Bomsztyk, K.3
  • 84
    • 0042822279 scopus 로고    scopus 로고
    • Association of the RENT complex with nontranscribed and coding regions of rDNA and a regional requirement for the replication fork block protein Fob1 in rDNA silencing
    • Huang J, Moazed D, (2003) Association of the RENT complex with nontranscribed and coding regions of rDNA and a regional requirement for the replication fork block protein Fob1 in rDNA silencing. Genes Dev 17: 2162-2176.
    • (2003) Genes Dev , vol.17 , pp. 2162-2176
    • Huang, J.1    Moazed, D.2
  • 85
    • 0019312433 scopus 로고
    • Lens metabolic cooperation: a study of mouse lens transport and permeability visualized with freeze-substitution autoradiography and electron microscopy
    • Goodenough DA, Dick JS 2nd, Lyons JE (1980) Lens metabolic cooperation: a study of mouse lens transport and permeability visualized with freeze-substitution autoradiography and electron microscopy. J Cell Biol 86: 576-589.
    • (1980) J Cell Biol , vol.86 , pp. 576-589
    • Goodenough, D.A.1    Dick 2nd, J.S.2    Lyons, J.E.3
  • 86
    • 67749088129 scopus 로고    scopus 로고
    • Gap junction turnover is achieved by the internalization of small endocytic double-membrane vesicles
    • Falk MM, Baker SM, Gumpert AM, Segretain D, Buckheit RW 3rd (2009) Gap junction turnover is achieved by the internalization of small endocytic double-membrane vesicles. Mol Biol Cell 20: 3342-3352.
    • (2009) Mol Biol Cell , vol.20 , pp. 3342-3352
    • Falk, M.M.1    Baker, S.M.2    Gumpert, A.M.3    Segretain, D.4    Buckheit 3rd, R.W.5
  • 87
    • 0041660903 scopus 로고    scopus 로고
    • The essential transcription factor Reb1p interacts with the CLB2 UAS outside of the G2/M control region
    • Van Slyke C, Grayhack EJ, (2003) The essential transcription factor Reb1p interacts with the CLB2 UAS outside of the G2/M control region. Nucleic Acids Res 31: 4597-4607.
    • (2003) Nucleic Acids Res , vol.31 , pp. 4597-4607
    • Van Slyke, C.1    Grayhack, E.J.2
  • 88
    • 0024679301 scopus 로고
    • KEX2 mutations suppress RNA polymerase II mutants and alter the temperature range of yeast cell growth
    • Martin C, Young RA, (1989) KEX2 mutations suppress RNA polymerase II mutants and alter the temperature range of yeast cell growth. Mol Cell Biol 9: 2341-2349.
    • (1989) Mol Cell Biol , vol.9 , pp. 2341-2349
    • Martin, C.1    Young, R.A.2
  • 89
    • 23844492486 scopus 로고    scopus 로고
    • Identifying gene-independent noncoding functional elements in the yeast ribosomal DNA by phylogenetic footprinting
    • Ganley AR, Hayashi K, Horiuchi T, Kobayashi T, (2005) Identifying gene-independent noncoding functional elements in the yeast ribosomal DNA by phylogenetic footprinting. Proc Natl Acad Sci U S A 102: 11787-11792.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 11787-11792
    • Ganley, A.R.1    Hayashi, K.2    Horiuchi, T.3    Kobayashi, T.4


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