Highly sensitive fluorescence assay of DNA methyltransferase activity via methylation-sensitive cleavage coupled with nicking enzyme-assisted signal amplification

Biosensors and Bioelectronics

Volumn 42, Issue 1, 2013, Pages 56-61

  Zhao, Yongxi ^a   Chen, Feng ^a   Wu, Yayan ^a   Dong, Yanhua ^a   Fan, Chunhai ^b  

^a XI'AN JIAOTONG UNIVERSITY   (China)

^b SHANGHAI INSTITUTE OF APPLIED PHYSICS   (China)

Author keywords

Fluorescence assay; Inhibitor; Methylation sensitive cleavage; Methyltransferase; Nicking enzyme assisted signal amplification

Indexed keywords

FLUORESCENCE ASSAY; INHIBITOR; METHYLATION-SENSITIVE CLEAVAGE; METHYLTRANSFERASES; SIGNAL AMPLIFICATIONS;

ALKYLATION; DAMS; DNA; FLUORESCENCE; METHYLATION; PROBES; SENSORS; SIGNAL DETECTION;

ENZYME INHIBITION;

DNA METHYLTRANSFERASE; ENDONUCLEASE; PROTEIN DPNI; SINGLE STRANDED DNA; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME ASSAY; ENZYME MODIFICATION; FLUORESCENCE ANALYSIS; LIMIT OF DETECTION; MOLECULAR RECOGNITION; PROCESS DEVELOPMENT; PROTEIN METHYLATION; SENSITIVITY ANALYSIS; SIGNAL TRANSDUCTION; STRUCTURE ANALYSIS;

BIOSENSING TECHNIQUES; DNA METHYLATION; DNA, SINGLE-STRANDED; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; FLUORESCENCE; LIMIT OF DETECTION; SITE-SPECIFIC DNA-METHYLTRANSFERASE (ADENINE-SPECIFIC);

EID: 84871660360     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2012.10.022     Document Type: Article

References (42)

1. Adams R.L.P., Rinaldi A., Seivwright C. Journal of Biochemical and Biophysical Methods 1991, 22:19-22.
2. Bergerat A., Guschlbauer W., Fazakerley G.V. Proceedings of the National Academy of Sciences 1991, 88:6394-6397.
3. Boye E., Marinus M.G., Løbner-Olesen A. Journal of Acteriology 1992, 174:1682-1685.
4. Chan S.H., Stoddard B.L., Xu S. Nucleic Acids Research 2011, 39:1-18.
5. Cheng W., Yan F., Ding L., Ju H., Yin Y. Analytical Chemistry 2010, 82:3337-3342.
6. Cheng X., Roberts R.J. Nucleic Acids Research 2001, 29:3784-3795.
7. Duegera E.L., Housea J.K., Heithoffc D.M., Mahan M.J. Vaccine 2003, 21:3249-3258.
8. Erova T.E., Pillai L., Fadl A.A., Sha J., Wang S.F., Galindo C.L., Chopra A.K. Infection and Immunity 2006, 74:410-424.
9. Feng F., Tang Y.L., He F., Yu M.H., Duan X.H., Wang S., Li Y.L., Zhu D.B. Advanced Materials 2007, 19:3490-3495.
10. Garcia-Del Portillo F., Pucciarelli M.G., Casadesus J. Proceedings of the National Academy of Sciences 1999, 96:11578-11583.
11. Gerasimova Y.V., Peck S., Kolpashchikov D.M. Chemical Communications 2010, 46:8761-8763.
12. He J.-L., Wu Z.-S., Zhou H., Wang H.-Q., Jiang J.-H., Shen G.-L., Yu R.-Q. Analytical Chemistry 2010, 82:1358-1364.
13. He X., Su J., Wang Y., Wang K., Ni X., Chen Z. Biosensors and Bioelectronics 2011, 28:298-303.
14. Heithoff D.M., Sinsheimer R.L., Low D.A., Mahan M.J. Science 1999, 284:967-970.
15. Higgins L.S., Besnier C., Kong H. Nucleic Acids Research 2001, 29:2492-2501.
16. Jiang C., Yan C.Y., Huang C., Jiang J.H., Yu R.Q. Analytical Biochemistry 2012, 423:224-228.
17. Julio S.M., Heithoff D.M., Provenzano D., Klose K.E., Sinsheimer R.L., Low D.A., Mahan M.J. Infection and Immunity 2001, 69:7610-7615.
18. Kiesling T., Cox K., Davidson E.A., Dretchen K., Grater G., Hibbard S., Lasken R.S., Leshin J., Skowronski E., Danielsen M. Nucleic Acids Research 2007, 35:e117.
19. Lee J., Icoz K., Roberts A., Ellington A.D., Savran C.A. Analytical Chemistry 2009, 82:197-202.
20. Li J., Fu H.E., Wu L.J., Zheng A.X., Chen G., Yang H.H. Analytical Chemistry 2012, 84:5309-5315.
21. Li J., Yan H., Wang K., Tan W., Zhou X. Analytical Chemistry 2007, 79:1050-1056.
22. Li J.J., Chu Y., Lee B.Y.H., Xie X.S. Nucleic Acids Research 2008, 36:e36.
23. Li W., Liu Z., Lin H., Nie Z., Chen J., Xu X., Yao S. Analytical Chemistry 2010, 82:1935-1941.
24. Liu S., Wu P., Li W., Zhang H., Cai C. Chemical Communications 2011, 47:2844-2846.
25. Liu T., Zhao J., Zhang D., Li G. Analytical Chemistry 2010, 82:229-233.
26. Low D.A., Weyand N.J., Mahan M.J. Infection and Immunity 2001, 69:7197-7204.
27. Messer W., Noyer-Weidner M. Cell 1988, 54:735-737.
28. Morgan R.D., Calvet C., Demeter M., Agra R., Kong H. Biological Chemistry 2000, 381:1123-1128.
29. Ouyang X.O.X., Liu J., Li J., Yang R. Chemical Communications 2012, 48:88-90.
30. Reisenauer A., Kahng L.S., McCollum S., Shapiro L. Journal of Bacteriology 1999, 181:5135-5139.
31. Robertson K.D. Nature Review Genetics 2005, 6:597-610.
32. Song G.T., Chen C., Ren J.S., Qu X.G. ACS Nano 2009, 3:1185-1189.
33. Su J., He X., Wang Y., Wang K., Chen Z., Yan G. Biosensors and Bioelectronics 2012, 36:123-128.
34. Wang, Y.H., He, X.X., Wang, K.M., Su, J., Chen, Z.F., Yan G.P., Du, Y.D., 2012. Biosensors and Bioelectronics, 2012, org/10.1016/j.bios.2012.08.034.
35. Wu H., Liu S., Jiang J., Shen G., Yu R. Chemical Communications 2012, 48:6280-6282.
36. Xu L., Zhu Y., Ma W., Kuang H., Liu L., Wang L., Xu C. Journal of Physical Chemistry C 2011, 115:16315-16321.
37. Xu W., Xue X., Li T., Zeng H., Liu X. Angewandte Chemie International Edition 2009, 48:6849-6852.
38. Xue L., Zhou X., Xing D. Analytical Chemistry 2012, 84:3507-3513.
39. Yan L., Nakayama S., Yitbarek S., Greenfield I., Sintim H.O. Chemical Communications 2011, 47:200-202.
40. Zhao Y., Qi L., Chen F., Dong Y., Kong Y., Wu Y., Fan C. Chemical Communications 2012, 48:3354-3356.
41. Zhou Y., Huang Q., Gao J., Lu J., Shen X., Fan C. Nucleic Acids Research 2010, 38:e156.
42. Zhu X., Zhao J., Wu Y., Shen Z., Li G. Analytical Chemistry 2011, 83:4085-4089.