-
1
-
-
34250733462
-
Sponge-associated microorganisms: Evolution, ecology, and biotechnological potential
-
Taylor MW, Radax R, Steger D, Wagner M, (2007) Sponge-associated microorganisms: Evolution, ecology, and biotechnological potential. Microbiol Mol Biol R 71: 295-347.
-
(2007)
Microbiol Mol Biol R
, vol.71
, pp. 295-347
-
-
Taylor, M.W.1
Radax, R.2
Steger, D.3
Wagner, M.4
-
2
-
-
84865168402
-
Genomic insights into the marine sponge microbiome
-
Henstchel U, Piel J, Degnan SM, Taylor MW, (2012) Genomic insights into the marine sponge microbiome. Nat Rev Microbiol 10: 641-654.
-
(2012)
Nat Rev Microbiol
, vol.10
, pp. 641-654
-
-
Henstchel, U.1
Piel, J.2
Degnan, S.M.3
Taylor, M.W.4
-
3
-
-
0000393614
-
Electron-microscope study of association between some sponges and bacteria
-
Vacelet J, Donadey C, (1977) Electron-microscope study of association between some sponges and bacteria. J Exp Mar Biol Ecol 30: 301-314.
-
(1977)
J Exp Mar Biol Ecol
, vol.30
, pp. 301-314
-
-
Vacelet, J.1
Donadey, C.2
-
4
-
-
0032837179
-
Microbial diversity in the marine sponge Aplysina cavernicola (formerly Verongia cavernicola) analyzed by fluorescence in situ hybridization (FISH)
-
Friedrich AB, Merkert H, Fendert T, Hacker J, Proksch P, et al. (1999) Microbial diversity in the marine sponge Aplysina cavernicola (formerly Verongia cavernicola) analyzed by fluorescence in situ hybridization (FISH). Mar Biol 134: 461-470.
-
(1999)
Mar Biol
, vol.134
, pp. 461-470
-
-
Friedrich, A.B.1
Merkert, H.2
Fendert, T.3
Hacker, J.4
Proksch, P.5
-
6
-
-
66249094562
-
Diversity of bacteria in the marine sponge Aplysina fulva in Brazilian coastal waters
-
Hardoim CCP, Costa R, Araujo FV, Hajdu E, Peixoto R, et al. (2009) Diversity of bacteria in the marine sponge Aplysina fulva in Brazilian coastal waters. Appl Environ Microb 75: 3331-3343.
-
(2009)
Appl Environ Microb
, vol.75
, pp. 3331-3343
-
-
Hardoim, C.C.P.1
Costa, R.2
Araujo, F.V.3
Hajdu, E.4
Peixoto, R.5
-
8
-
-
77955263252
-
Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts
-
Webster NS, Taylor MW, Behnam F, Lücker S, Rattei T, et al. (2010) Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts. Environ Microbiol 12: 2070-2082.
-
(2010)
Environ Microbiol
, vol.12
, pp. 2070-2082
-
-
Webster, N.S.1
Taylor, M.W.2
Behnam, F.3
Lücker, S.4
Rattei, T.5
-
9
-
-
79953028506
-
Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea
-
Lee OO, Wang Y, Yang JK, Lafi FF, Al-Suwailem A, et al. (2011) Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea. ISME J 5: 650-664.
-
(2011)
ISME J
, vol.5
, pp. 650-664
-
-
Lee, O.O.1
Wang, Y.2
Yang, J.K.3
Lafi, F.F.4
Al-Suwailem, A.5
-
10
-
-
33745026252
-
Comparative morphology of five species of symbiotic and non-symbiotic coccoid Cyanobacteria
-
Usher K, Kuo J, Fromont J, Toze S, Sutton D, (2006) Comparative morphology of five species of symbiotic and non-symbiotic coccoid Cyanobacteria. Eur J Phycol 41: 179-188.
-
(2006)
Eur J Phycol
, vol.41
, pp. 179-188
-
-
Usher, K.1
Kuo, J.2
Fromont, J.3
Toze, S.4
Sutton, D.5
-
11
-
-
34247494635
-
Vertical transmission of a phylogenetically complex microbial consortium in the viviparous sponge Ircinia felix
-
Schmitt S, Weisz J, Lindquist N, Hentschel U, (2007) Vertical transmission of a phylogenetically complex microbial consortium in the viviparous sponge Ircinia felix. Appl Environ Microb 73: 2067-2078.
-
(2007)
Appl Environ Microb
, vol.73
, pp. 2067-2078
-
-
Schmitt, S.1
Weisz, J.2
Lindquist, N.3
Hentschel, U.4
-
12
-
-
34547118551
-
Linking abundance and diversity of sponge-associated microbial communities to metabolic differences in host sponges
-
Weisz J, Hentschel U, Lindquist N, Martens C, (2007) Linking abundance and diversity of sponge-associated microbial communities to metabolic differences in host sponges. Mar Biol 152: 475-483.
-
(2007)
Mar Biol
, vol.152
, pp. 475-483
-
-
Weisz, J.1
Hentschel, U.2
Lindquist, N.3
Martens, C.4
-
13
-
-
52949128704
-
Diversity and expression of nitrogen fixation genes in bacterial symbionts of marine sponges
-
Mohamed NM, Colman AS, Tal Y, Hill RT, (2008) Diversity and expression of nitrogen fixation genes in bacterial symbionts of marine sponges. Environ Microbiol 10: 2910-2921.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2910-2921
-
-
Mohamed, N.M.1
Colman, A.S.2
Tal, Y.3
Hill, R.T.4
-
14
-
-
38149058844
-
Diversity and quorum-sensing signal production of Proteobacteria associated with marine sponges
-
Mohamed N, Cicirelli E, Kan J, Chen F, Fuqua C, et al. (2008) Diversity and quorum-sensing signal production of Proteobacteria associated with marine sponges. Environ Microbiol 10: 75-86.
-
(2008)
Environ Microbiol
, vol.10
, pp. 75-86
-
-
Mohamed, N.1
Cicirelli, E.2
Kan, J.3
Chen, F.4
Fuqua, C.5
-
15
-
-
46949090173
-
Monitoring bacterial diversity of the marine sponge Ircinia strobilina upon transfer into aquaculture
-
Mohamed N, Rao V, Hamann M, Kelly M, Hill R, (2008) Monitoring bacterial diversity of the marine sponge Ircinia strobilina upon transfer into aquaculture. Appl Environ Microb 74: 4133-4143.
-
(2008)
Appl Environ Microb
, vol.74
, pp. 4133-4143
-
-
Mohamed, N.1
Rao, V.2
Hamann, M.3
Kelly, M.4
Hill, R.5
-
16
-
-
73449144736
-
Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges
-
Mohamed NM, Saito K, Tal Y, Hill RT, (2010) Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges. ISME J 4: 38-48.
-
(2010)
ISME J
, vol.4
, pp. 38-48
-
-
Mohamed, N.M.1
Saito, K.2
Tal, Y.3
Hill, R.T.4
-
17
-
-
79956292100
-
Phylogenetic diversity and community structure of sponge-associated bacteria from mangroves of the Caribbean Sea
-
Yang JK, Sun J, Lee OO, Wong YH, Qian PY, (2011) Phylogenetic diversity and community structure of sponge-associated bacteria from mangroves of the Caribbean Sea. Aquat Microb Ecol 62: 231-240.
-
(2011)
Aquat Microb Ecol
, vol.62
, pp. 231-240
-
-
Yang, J.K.1
Sun, J.2
Lee, O.O.3
Wong, Y.H.4
Qian, P.Y.5
-
18
-
-
84856035239
-
A specific mix of generalists: bacterial symbionts in Mediterranean Ircinia spp
-
Erwin PM, López-Legentil S, Gonzalez-Pech R, Turon X, (2012) A specific mix of generalists: bacterial symbionts in Mediterranean Ircinia spp. FEMS Microbiol Ecol 79: 619-637.
-
(2012)
FEMS Microbiol Ecol
, vol.79
, pp. 619-637
-
-
Erwin, P.M.1
López-Legentil, S.2
Gonzalez-Pech, R.3
Turon, X.4
-
19
-
-
3042706094
-
Psymberin, a potent sponge-derived cytotoxin from Psammocinia distantly related to the pederin family
-
Cichewicz R, Valeriote F, Crews P, (2004) Psymberin, a potent sponge-derived cytotoxin from Psammocinia distantly related to the pederin family. Org Lett 6: 1951-1954.
-
(2004)
Org Lett
, vol.6
, pp. 1951-1954
-
-
Cichewicz, R.1
Valeriote, F.2
Crews, P.3
-
20
-
-
33646348701
-
Irciniasulfonic acid B, a novel taurine conjugated fatty acid derivative from a Japanese marine sponge, Ircinia sp
-
Emura C, Higuchi R, Miyamoto T, (2006) Irciniasulfonic acid B, a novel taurine conjugated fatty acid derivative from a Japanese marine sponge, Ircinia sp. Tetrahedron 62: 5682-5685.
-
(2006)
Tetrahedron
, vol.62
, pp. 5682-5685
-
-
Emura, C.1
Higuchi, R.2
Miyamoto, T.3
-
21
-
-
33746498355
-
Heterocyclic terpenes: linear furano- and pyrroloterpenoids
-
Liu Y, Zhang S, Abreu P, (2006) Heterocyclic terpenes: linear furano- and pyrroloterpenoids. Nat Prod Rep 23: 630-651.
-
(2006)
Nat Prod Rep
, vol.23
, pp. 630-651
-
-
Liu, Y.1
Zhang, S.2
Abreu, P.3
-
22
-
-
40649083229
-
A series of new 5,6-epoxysterols from a Chinese sponge Ircinia aruensis
-
Xu S, Liao X, Du B, Zhou X, Huang Q, et al. (2008) A series of new 5,6-epoxysterols from a Chinese sponge Ircinia aruensis. Steroids 73: 568-573.
-
(2008)
Steroids
, vol.73
, pp. 568-573
-
-
Xu, S.1
Liao, X.2
Du, B.3
Zhou, X.4
Huang, Q.5
-
23
-
-
69149089387
-
Hexa-, hepta- and nonaprenylhydroquinones isolated from marine sponges Sarcotragus muscarum and Ircinia fasciculata inhibit NF-kappa B signalling in H4IIE cells
-
Wätjen W, Putz A, Chovolou Y, Kampkötter A, Totzke F, et al. (2009) Hexa-, hepta- and nonaprenylhydroquinones isolated from marine sponges Sarcotragus muscarum and Ircinia fasciculata inhibit NF-kappa B signalling in H4IIE cells. J Pharm Pharmacol 61: 919-924.
-
(2009)
J Pharm Pharmacol
, vol.61
, pp. 919-924
-
-
Wätjen, W.1
Putz, A.2
Chovolou, Y.3
Kampkötter, A.4
Totzke, F.5
-
24
-
-
76149101983
-
Inhibitory activity of marine sponge-derived natural products against parasitic Protozoa
-
Orhan I, Sener B, Kaiser M, Brun R, Tasdemir D, (2010) Inhibitory activity of marine sponge-derived natural products against parasitic Protozoa. Mar Drugs 8: 47-58.
-
(2010)
Mar Drugs
, vol.8
, pp. 47-58
-
-
Orhan, I.1
Sener, B.2
Kaiser, M.3
Brun, R.4
Tasdemir, D.5
-
25
-
-
0041565163
-
Marine bacteria associated with sponge as source of cyclic peptides
-
De Rosa S, Mitova M, Tommonaro G, (2003) Marine bacteria associated with sponge as source of cyclic peptides. Biomol Eng 20: 311-316.
-
(2003)
Biomol Eng
, vol.20
, pp. 311-316
-
-
De Rosa, S.1
Mitova, M.2
Tommonaro, G.3
-
26
-
-
0141958920
-
A novel cyclopeptide from a bacterium associated with the marine sponge Ircinia muscarum
-
Mitova M, Tommonaro G, De Rosa S, (2003) A novel cyclopeptide from a bacterium associated with the marine sponge Ircinia muscarum. Z Naturforschung C 58c: 740-745.
-
(2003)
Z Naturforschung C
, vol.58 c
, pp. 740-745
-
-
Mitova, M.1
Tommonaro, G.2
De Rosa, S.3
-
27
-
-
67650281479
-
Polyketide assembly lines of uncultivated sponge symbionts from structure-based gene targeting
-
Fisch K, Gurgui C, Heycke N, van der Sar S, Anderson S, et al. (2009) Polyketide assembly lines of uncultivated sponge symbionts from structure-based gene targeting. Nat Chem Biol 5: 494-501.
-
(2009)
Nat Chem Biol
, vol.5
, pp. 494-501
-
-
Fisch, K.1
Gurgui, C.2
Heycke, N.3
van der Sar, S.4
Anderson, S.5
-
28
-
-
84857121586
-
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges
-
Schmitt S, Tsai P, Bell J, Fromont J, Ilan M, et al. (2011) Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges. ISME J 6: 564-576.
-
(2011)
ISME J
, vol.6
, pp. 564-576
-
-
Schmitt, S.1
Tsai, P.2
Bell, J.3
Fromont, J.4
Ilan, M.5
-
29
-
-
77956396111
-
Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site-and species-specificity of common bacterial associates
-
doi:10.1371/journal.pone.0010401
-
Kvennefors ECE, Sampayo E, Ridgway T, Barnes AC, Hoegh-Guldberg O, (2010) Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site-and species-specificity of common bacterial associates. PLoS ONE 5: e10401 doi:10.1371/journal.pone.0010401.
-
(2010)
PLoS ONE
, vol.5
-
-
Kvennefors, E.C.E.1
Sampayo, E.2
Ridgway, T.3
Barnes, A.C.4
Hoegh-Guldberg, O.5
-
30
-
-
77950904616
-
Forensic identification using skin bacterial communities
-
Fierer N, Lauber CL, Zhou N, McDonald D, Costello EK, et al. (2010) Forensic identification using skin bacterial communities. P Natl Acad Sci USA 107: 6477-6481.
-
(2010)
P Natl Acad Sci USA
, vol.107
, pp. 6477-6481
-
-
Fierer, N.1
Lauber, C.L.2
Zhou, N.3
McDonald, D.4
Costello, E.K.5
-
31
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
Arumugam M, Raes J, Pelletier E, Le Paslier D, Yamada T, et al. (2011) Enterotypes of the human gut microbiome. Nature 473: 174-180.
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
Raes, J.2
Pelletier, E.3
Le Paslier, D.4
Yamada, T.5
-
32
-
-
36049009735
-
Marine Actinobacteria: new opportunities for natural product search and discovery
-
Bull AT, Stach JEM, (2007) Marine Actinobacteria: new opportunities for natural product search and discovery. Trends Microbiol 15: 491-499.
-
(2007)
Trends Microbiol
, vol.15
, pp. 491-499
-
-
Bull, A.T.1
Stach, J.E.M.2
-
33
-
-
84856583756
-
Marine sponges and their microbial symbionts: love and other relationships
-
Webster NS, Taylor MW, (2012) Marine sponges and their microbial symbionts: love and other relationships. Environ Microbiol 14: 335-346.
-
(2012)
Environ Microbiol
, vol.14
, pp. 335-346
-
-
Webster, N.S.1
Taylor, M.W.2
-
34
-
-
84856569941
-
Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms
-
Simister RL, Deines P, Botté ES, Webster NS, Taylor MW, (2012) Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms. Environ Microbiol 14: 514-524.
-
(2012)
Environ Microbiol
, vol.14
, pp. 514-524
-
-
Simister, R.L.1
Deines, P.2
Botté, E.S.3
Webster, N.S.4
Taylor, M.W.5
-
35
-
-
34047181806
-
Family Irciniidae Gray, 1867
-
Hooper JNA, van Soest RWM, editors, Kluwer Academic/Plenum Publishers, New York, NY
-
Cook SC, Bergquist PR (2002) Family Irciniidae Gray, 1867, In: Hooper JNA, van Soest RWM, editors. System Porifera: a guide to the classification of sponges. Kluwer Academic/Plenum Publishers, New York, NY. 1022-1027.
-
(2002)
System Porifera: A guide to the classification of sponges
, pp. 1022-1027
-
-
Cook, S.C.1
Bergquist, P.R.2
-
36
-
-
0036940576
-
Unravelling host and symbiont phylogenies of halichondrid sponges (Demospongiae, Porifera) using a mitochondrial marker
-
Erpenbeck D, Breeuwer J, van der Velde H, van Soest R, (2002) Unravelling host and symbiont phylogenies of halichondrid sponges (Demospongiae, Porifera) using a mitochondrial marker. Mar Biol 141: 377-386.
-
(2002)
Mar Biol
, vol.141
, pp. 377-386
-
-
Erpenbeck, D.1
Breeuwer, J.2
van der Velde, H.3
van Soest, R.4
-
37
-
-
36749029344
-
DNA taxonomy of sponges - progress and perspectives
-
Wörheide G, Erpenbeck D, (2007) DNA taxonomy of sponges- progress and perspectives. J Mar Biol Assoc UK 87: 1629-1633.
-
(2007)
J Mar Biol Assoc UK
, vol.87
, pp. 1629-1633
-
-
Wörheide, G.1
Erpenbeck, D.2
-
38
-
-
36749083411
-
Towards a DNA taxonomy of Caribbean demosponges: a gene tree reconstructed from partial mitochondrial CO1 gene sequences supports previous rDNA phylogenies and provides a new perspective on the systematics of Demospongiae
-
Erpenbeck D, Duran S, Rutzler K, Paul V, Hooper JNA, et al. (2007) Towards a DNA taxonomy of Caribbean demosponges: a gene tree reconstructed from partial mitochondrial CO1 gene sequences supports previous rDNA phylogenies and provides a new perspective on the systematics of Demospongiae. J Mar Biol Assoc UK 87: 1563-1570.
-
(2007)
J Mar Biol Assoc UK
, vol.87
, pp. 1563-1570
-
-
Erpenbeck, D.1
Duran, S.2
Rutzler, K.3
Paul, V.4
Hooper, J.N.A.5
-
39
-
-
71049186053
-
Morphological description and DNA barcodes of shallow-water Tetractinellida (Porifera: Demospongiae) from Bocas del Toro, Panamá, with description of a new species
-
Cardenas P, Menegola C, Rapp HT, Diaz MC (2009) Morphological description and DNA barcodes of shallow-water Tetractinellida (Porifera: Demospongiae) from Bocas del Toro, Panamá, with description of a new species. Zootaxa: 1-39.
-
(2009)
Zootaxa
, pp. 1-39
-
-
Cardenas, P.1
Menegola, C.2
Rapp, H.T.3
Diaz, M.C.4
-
40
-
-
77956305333
-
CO I barcoding reveals new clades and radiation patterns of Indo-Pacific sponges of the Family Irciniidae (Demospongiae: Dictyoceratida)
-
doi:10.1371/journal.pone.0009950
-
Pöppe J, Sutcliffe P, Hooper JNA, Wörheide G, Erpenbeck D, (2010) CO I barcoding reveals new clades and radiation patterns of Indo-Pacific sponges of the Family Irciniidae (Demospongiae: Dictyoceratida). PLoS ONE 5: e9950 doi:10.1371/journal.pone.0009950.
-
(2010)
PLoS ONE
, vol.5
-
-
Pöppe, J.1
Sutcliffe, P.2
Hooper, J.N.A.3
Wörheide, G.4
Erpenbeck, D.5
-
41
-
-
77958088494
-
Phylogeography, genetic diversity and structure of the poecilosclerid sponge Phorbas fictitius at oceanic islands
-
Xavier JR, Van Soest RWM, Breeuwer JAJ, Martins AMF, Menken SBJ, (2010) Phylogeography, genetic diversity and structure of the poecilosclerid sponge Phorbas fictitius at oceanic islands. Contrib Zool 79: 119-129.
-
(2010)
Contrib Zool
, vol.79
, pp. 119-129
-
-
Xavier, J.R.1
Van Soest, R.W.M.2
Breeuwer, J.A.J.3
Martins, A.M.F.4
Menken, S.B.J.5
-
42
-
-
0038454745
-
Host specificity of the symbiotic cyanobacterium Oscillatoria spongeliae in marine sponges, Dysidea spp
-
Thacker R, Starnes S, (2003) Host specificity of the symbiotic cyanobacterium Oscillatoria spongeliae in marine sponges, Dysidea spp. Mar Biol 142: 643-648.
-
(2003)
Mar Biol
, vol.142
, pp. 643-648
-
-
Thacker, R.1
Starnes, S.2
-
43
-
-
82955194453
-
Sponge-associated bacteria are strictly maintained in two closely related but geographically distant sponge hosts
-
Montalvo NF, Hill RT, (2011) Sponge-associated bacteria are strictly maintained in two closely related but geographically distant sponge hosts. Appl Environ Microb 77: 7207-7216.
-
(2011)
Appl Environ Microb
, vol.77
, pp. 7207-7216
-
-
Montalvo, N.F.1
Hill, R.T.2
-
44
-
-
0025199036
-
Phenotypic study of bacteria associated with the caribbean sclerosponge, Ceratoporella nicholsoni
-
Santavy DL, Willenz P, Colwell RR, (1990) Phenotypic study of bacteria associated with the caribbean sclerosponge, Ceratoporella nicholsoni. Appl Environ Microb 56: 1750-1762.
-
(1990)
Appl Environ Microb
, vol.56
, pp. 1750-1762
-
-
Santavy, D.L.1
Willenz, P.2
Colwell, R.R.3
-
45
-
-
0035956590
-
Temporal variation of the microbial community associated with the mediterranean sponge Aplysina aerophoba
-
Friedrich AB, Fischer I, Proksch P, Hacker J, Hentschel U, (2001) Temporal variation of the microbial community associated with the mediterranean sponge Aplysina aerophoba. FEMS Microbiol Ecol 38: 105-113.
-
(2001)
FEMS Microbiol Ecol
, vol.38
, pp. 105-113
-
-
Friedrich, A.B.1
Fischer, I.2
Proksch, P.3
Hacker, J.4
Hentschel, U.5
-
46
-
-
0035051257
-
The culturable microbial community of the Great Barrier Reef sponge Rhopaloeides odorabile is dominated by an alpha-Proteobacterium
-
Webster NS, Hill RT, (2001) The culturable microbial community of the Great Barrier Reef sponge Rhopaloeides odorabile is dominated by an alpha-Proteobacterium. Mar Biol 138: 843-851.
-
(2001)
Mar Biol
, vol.138
, pp. 843-851
-
-
Webster, N.S.1
Hill, R.T.2
-
47
-
-
34249962598
-
Response of sponges with autotrophic endosymbionts during the coral-bleaching episode in Puerto Rico
-
Vicente VP, (1990) Response of sponges with autotrophic endosymbionts during the coral-bleaching episode in Puerto Rico. Coral Reefs 8: 199-202.
-
(1990)
Coral Reefs
, vol.8
, pp. 199-202
-
-
Vicente, V.P.1
-
48
-
-
39249083059
-
Do associated microbial abundances impact marine demosponge pumping rates and tissue densities?
-
Weisz JB, Lindquist N, Martens CS, (2008) Do associated microbial abundances impact marine demosponge pumping rates and tissue densities? Oecologia 155: 367-376.
-
(2008)
Oecologia
, vol.155
, pp. 367-376
-
-
Weisz, J.B.1
Lindquist, N.2
Martens, C.S.3
-
49
-
-
1142306012
-
Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity
-
Taylor MW, Schupp PJ, Dahllof I, Kjelleberg S, Steinberg PD, (2004) Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity. Environ Microbiol 6: 121-130.
-
(2004)
Environ Microbiol
, vol.6
, pp. 121-130
-
-
Taylor, M.W.1
Schupp, P.J.2
Dahllof, I.3
Kjelleberg, S.4
Steinberg, P.D.5
-
50
-
-
14344265856
-
Biogeography of bacteria associated with the marine sponge Cymbastela concentrica
-
Taylor MW, Schupp PJ, de Nys R, Kjelleberg S, Steinberg PD, (2005) Biogeography of bacteria associated with the marine sponge Cymbastela concentrica. Environ Microbiol 7: 419-433.
-
(2005)
Environ Microbiol
, vol.7
, pp. 419-433
-
-
Taylor, M.W.1
Schupp, P.J.2
de Nys, R.3
Kjelleberg, S.4
Steinberg, P.D.5
-
51
-
-
84862998261
-
Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts
-
Fan L, Reynolds D, Liu M, Stark M, Kjelleberg S, et al. (2012) Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts. P Natl Acad Sci USA 109: E1878-E1887.
-
(2012)
P Natl Acad Sci USA
, vol.109
-
-
Fan, L.1
Reynolds, D.2
Liu, M.3
Stark, M.4
Kjelleberg, S.5
-
52
-
-
0030893495
-
Proposal for a new hierarchic classification system, Actinobacteria classis nov
-
Stackebrandt E, Rainey FA, Ward-Rainey NL, (1997) Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int J Syst Bacteriol 47: 479-491.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 479-491
-
-
Stackebrandt, E.1
Rainey, F.A.2
Ward-Rainey, N.L.3
-
53
-
-
70349414422
-
Evidence for vertical transmission of bacterial symbionts from adult to embryo in the Caribbean sponge Svenzea zeai
-
Lee OO, Chui PY, Wong YH, Pawlik JR, Qian PY, (2009) Evidence for vertical transmission of bacterial symbionts from adult to embryo in the Caribbean sponge Svenzea zeai. Appl Environ Microb 75: 6147-6156.
-
(2009)
Appl Environ Microb
, vol.75
, pp. 6147-6156
-
-
Lee, O.O.1
Chui, P.Y.2
Wong, Y.H.3
Pawlik, J.R.4
Qian, P.Y.5
-
54
-
-
57449117293
-
Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts
-
Schmitt S, Angermeier H, Schiller R, Lindquist N, Hentschel U, (2008) Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts. Appl Environ Microb 74: 7694-7708.
-
(2008)
Appl Environ Microb
, vol.74
, pp. 7694-7708
-
-
Schmitt, S.1
Angermeier, H.2
Schiller, R.3
Lindquist, N.4
Hentschel, U.5
-
55
-
-
0029988467
-
Acidimicrobium ferrooxidans gen nov, sp nov: Mixed-culture ferrous iron oxidation with Sulfobacillus species
-
Clark DA, Norris PR, (1996) Acidimicrobium ferrooxidans gen nov, sp nov: Mixed-culture ferrous iron oxidation with Sulfobacillus species. Microbiol UK 142: 785-790.
-
(1996)
Microbiol UK
, vol.142
, pp. 785-790
-
-
Clark, D.A.1
Norris, P.R.2
-
56
-
-
77957777354
-
Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T))
-
Clum A, Nolan M, Lang E, Del Rio TG, Tice H, et al. (2009) Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)). Stand Genomic Sci 1: 38-45.
-
(2009)
Stand Genomic Sci
, vol.1
, pp. 38-45
-
-
Clum, A.1
Nolan, M.2
Lang, E.3
Del Rio, T.G.4
Tice, H.5
-
57
-
-
72449203107
-
Ferrous iron and pyrite oxidation by "Acidithiomicrobium" species
-
Davis-Belmar CS, Norris PR, (2009) Ferrous iron and pyrite oxidation by "Acidithiomicrobium" species. Adv Mater Res 71-73: 271-274.
-
(2009)
Adv Mater Res
, vol.71-73
, pp. 271-274
-
-
Davis-Belmar, C.S.1
Norris, P.R.2
-
58
-
-
67649808144
-
Ferrimicrobium acidiphilum gen. nov., sp. nov. and Ferrithrix thermotolerans gen. nov., sp. nov.: heterotrophic, iron-oxidizing, extremely acidophilic Actinobacteria
-
Johnson DB, Bacelar-Nicolau P, Okibe N, Thomas A, Hallberg KB, (2009) Ferrimicrobium acidiphilum gen. nov., sp. nov. and Ferrithrix thermotolerans gen. nov., sp. nov.: heterotrophic, iron-oxidizing, extremely acidophilic Actinobacteria. Int J Syst Evol Micr 59: 1082-1089.
-
(2009)
Int J Syst Evol Micr
, vol.59
, pp. 1082-1089
-
-
Johnson, D.B.1
Bacelar-Nicolau, P.2
Okibe, N.3
Thomas, A.4
Hallberg, K.B.5
-
59
-
-
36849002602
-
Order I. Chromatiales ord. nov
-
Brenner DJ, Krieg NR, Staley NR, Garrity GM, editors, 2nd edn, (The Proteobacteria), part B (The Gammaproteobacteria). New York: Springer
-
Imhoff JF (2005) Order I. Chromatiales ord. nov. In: Brenner DJ, Krieg NR, Staley NR, Garrity GM, editors. Bergeýs Manual of Systematic Bacteriology, 2nd edn, vol. 2 (The Proteobacteria), part B (The Gammaproteobacteria). New York: Springer. 1-3.
-
(2005)
Bergeýs Manual of Systematic Bacteriology
, vol.2
, pp. 1-3
-
-
Imhoff, J.F.1
-
60
-
-
0000563302
-
Nitrogen-fixing, photosynthetic, anaerobic bacteria associated with pelagic copepods
-
Proctor LM, (1997) Nitrogen-fixing, photosynthetic, anaerobic bacteria associated with pelagic copepods. Aquat Microb Ecol 12: 105-113.
-
(1997)
Aquat Microb Ecol
, vol.12
, pp. 105-113
-
-
Proctor, L.M.1
-
61
-
-
81155125194
-
Chloroflexi bacteria are more diverse, abundant, and similar in high than in low microbial abundance sponges
-
Schmitt S, Deines P, Behnam F, Wagner M, Taylor MW, (2011) Chloroflexi bacteria are more diverse, abundant, and similar in high than in low microbial abundance sponges. FEMS Microbiol Ecol 78: 497-510.
-
(2011)
FEMS Microbiol Ecol
, vol.78
, pp. 497-510
-
-
Schmitt, S.1
Deines, P.2
Behnam, F.3
Wagner, M.4
Taylor, M.W.5
-
62
-
-
77951499290
-
Comparison of the anaerobic microbiota of deep-water Geodia spp. and sandy sediments in the Straits of Florida
-
Bruck WM, Bruck TB, Self WT, Reed JK, Nitecki SS, et al. (2010) Comparison of the anaerobic microbiota of deep-water Geodia spp. and sandy sediments in the Straits of Florida. ISME J 4: 686-699.
-
(2010)
ISME J
, vol.4
, pp. 686-699
-
-
Bruck, W.M.1
Bruck, T.B.2
Self, W.T.3
Reed, J.K.4
Nitecki, S.S.5
-
63
-
-
78649723307
-
PKS and NRPS gene clusters from microbial symbiont cells of marine sponges by whole genome amplification
-
Siegl A, Hentschel U, (2010) PKS and NRPS gene clusters from microbial symbiont cells of marine sponges by whole genome amplification. Environ Microbiol Rep 2: 507-513.
-
(2010)
Environ Microbiol Rep
, vol.2
, pp. 507-513
-
-
Siegl, A.1
Hentschel, U.2
-
64
-
-
33646193540
-
Order III. Rhodobacterales ord. nov
-
Brenner DJ, Krieg NR, Staley NR, Garrity GM, editors, 2nd edn, (The Proteobacteria), part C (The Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria). New York: Springer
-
Garrity (2006) Order III. Rhodobacterales ord. nov. In: Brenner DJ, Krieg NR, Staley NR, Garrity GM, editors. Bergeýs Manual of systematic Bacteriology, 2nd edn, vol. 2 (The Proteobacteria), part C (The Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria). New York: Springer. 161-167.
-
(2006)
Bergeýs Manual of systematic Bacteriology
, vol.2
, pp. 161-167
-
-
Garrity1
-
65
-
-
0028958997
-
Isolation and characterization of Rhodovulum strictum sp. nov. and some other purple nonsulfur bacteria from colored blooms in tidal and seawater pools
-
Hiraishi A, Ueda Y, (1995) Isolation and characterization of Rhodovulum strictum sp. nov. and some other purple nonsulfur bacteria from colored blooms in tidal and seawater pools. Int J Syst Bacteriol 45: 319-326.
-
(1995)
Int J Syst Bacteriol
, vol.45
, pp. 319-326
-
-
Hiraishi, A.1
Ueda, Y.2
-
66
-
-
33847208194
-
Rhodovulum imhoffii sp. nov
-
Srinivas T, Kumar PA, Sasikala C, Ramana CV, (2007) Rhodovulum imhoffii sp. nov. Int J Syst Evol Micr 57: 228-232.
-
(2007)
Int J Syst Evol Micr
, vol.57
, pp. 228-232
-
-
Srinivas, T.1
Kumar, P.A.2
Sasikala, C.3
Ramana, C.V.4
-
67
-
-
77953197482
-
Genus XIV. Rhodovulum Hiraishi and Ueda 1994
-
Brenner DJ, Krieg NR, Staley NR, Garrity GM, editors, 2nd edn, (The Proteobacteria), part C (The Alphaproteobacteria,Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria),. New York: Springer
-
Imhoff JF (2005) Genus XIV. Rhodovulum Hiraishi and Ueda 1994. In: Brenner DJ, Krieg NR, Staley NR, Garrity GM, editors. Bergeýs Manual of systematic Bacteriology, 2nd edn, vol. 2 (The Proteobacteria), part C (The Alphaproteobacteria, Betaproteobacteria, Deltaproteobacteria and Epsilonproteobacteria),. New York: Springer. 205-209.
-
(2005)
Bergeýs Manual of systematic Bacteriology
, vol.2
, pp. 205-209
-
-
Imhoff, J.F.1
-
68
-
-
66249117184
-
Phylum Porifera: the sponges
-
In Sunauer AD, editor, Sinauer Associates, Inc.,Cambridge, MA
-
Brusca RC, Brusca GJ (2002) Phylum Porifera: the sponges,. In Sunauer AD, editor. Invertebrates. Sinauer Associates, Inc.,Cambridge, MA. 179-208.
-
(2002)
Invertebrates
, pp. 179-208
-
-
Brusca, R.C.1
Brusca, G.J.2
-
69
-
-
0036729439
-
Molecular evidence for a uniform microbial community in sponges from different oceans
-
Hentschel U, Hopke J, Horn M, Friedrich AB, Wagner M, et al. (2002) Molecular evidence for a uniform microbial community in sponges from different oceans. Appl Environ Microb 68: 4431-4440.
-
(2002)
Appl Environ Microb
, vol.68
, pp. 4431-4440
-
-
Hentschel, U.1
Hopke, J.2
Horn, M.3
Friedrich, A.B.4
Wagner, M.5
-
70
-
-
0001353963
-
Some considerations of growth of marine algae in artificial media
-
McLachlan J, (1964) Some considerations of growth of marine algae in artificial media. Can J Microbiol 10: 769-772.
-
(1964)
Can J Microbiol
, vol.10
, pp. 769-772
-
-
McLachlan, J.1
-
71
-
-
4344656120
-
Fine scale endemism on coral reefs: Archipelagic differentiation in turbinid gastropods
-
Meyer CP, Geller JB, Paulay G, (2005) Fine scale endemism on coral reefs: Archipelagic differentiation in turbinid gastropods. Evolution 59: 113-125.
-
(2005)
Evolution
, vol.59
, pp. 113-125
-
-
Meyer, C.P.1
Geller, J.B.2
Paulay, G.3
-
72
-
-
0028528103
-
DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
-
Folmer O, Black M, Hoeh W, Lutz R Vrijenhoek. R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotech 3: 294-299.
-
(1994)
Mol Mar Biol Biotech
, vol.3
, pp. 294-299
-
-
Folmer, O.1
Black, M.2
Hoeh, W.3
Lutz, R.V.R.4
-
73
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
-
74
-
-
0031854930
-
A sponge/dinoflagellate association in the haplosclerid sponge Haliclona sp.: cellular origin of cytotoxic alkaloids by Percoll density gradient fractionation
-
Garson MJ, Flowers AE, Webb RI, Charan RD, McCaffrey EJ, (1998) A sponge/dinoflagellate association in the haplosclerid sponge Haliclona sp.: cellular origin of cytotoxic alkaloids by Percoll density gradient fractionation. Cell Tissue Res 293: 365-373.
-
(1998)
Cell Tissue Res
, vol.293
, pp. 365-373
-
-
Garson, M.J.1
Flowers, A.E.2
Webb, R.I.3
Charan, R.D.4
McCaffrey, E.J.5
-
75
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg WG, Barns SM, Pelletier DA, Lane DJ, (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173: 697-703.
-
(1991)
J Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
Lane, D.J.4
-
76
-
-
0030739128
-
Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients
-
Heuer H, Krsek M, Baker P, Smalla K, Wellington EMH, (1997) Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients. Appl Environ Microb 63: 3233-3241.
-
(1997)
Appl Environ Microb
, vol.63
, pp. 3233-3241
-
-
Heuer, H.1
Krsek, M.2
Baker, P.3
Smalla, K.4
Wellington, E.M.H.5
-
77
-
-
33645977196
-
Effects of site and plant species on rhizosphere community structure as revealed by molecular analysis of microbial guilds
-
Costa R, Götz M, Mrotzek N, Lottmann J, Berg G, et al. (2006) Effects of site and plant species on rhizosphere community structure as revealed by molecular analysis of microbial guilds. FEMS Microbiol Ecol 56: 236-249.
-
(2006)
FEMS Microbiol Ecol
, vol.56
, pp. 236-249
-
-
Costa, R.1
Götz, M.2
Mrotzek, N.3
Lottmann, J.4
Berg, G.5
-
78
-
-
0034948012
-
Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis
-
Gomes NCM, Heuer H, Schonfeld J, Costa R, Mendonça-Hagler L, et al. (2001) Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis. Plant Soil 232: 167-180.
-
(2001)
Plant Soil
, vol.232
, pp. 167-180
-
-
Gomes, N.C.M.1
Heuer, H.2
Schonfeld, J.3
Costa, R.4
Mendonça-Hagler, L.5
-
79
-
-
35948954415
-
Computer-assisted analysis of molecular fingerprint profiles and database construction
-
GA Kowalchuk, FJ de Bruijn, IM Head, AD Akkermans, JD van Elsas editors, Kluwer Academic Publishers, Dordrecht, The Netherlands
-
Rademaker J, de Bruijn FJ (2004) Computer-assisted analysis of molecular fingerprint profiles and database construction, In: GA Kowalchuk, FJ de Bruijn, IM Head, AD Akkermans, JD van Elsas editors. Molecular Microbial Ecology Manual. Kluwer Academic Publishers, Dordrecht, The Netherlands. 1397-1446.
-
(2004)
Molecular Microbial Ecology Manual
, pp. 1397-1446
-
-
Rademaker, J.1
de Bruijn, F.J.2
-
80
-
-
33750919098
-
Cultivation-independent analysis of Pseudomonas species in soil and in the rhizosphere of field-grown Verticillium dahliae host plants
-
Costa R, Salles JF, Berg G, Smalla K, (2006) Cultivation-independent analysis of Pseudomonas species in soil and in the rhizosphere of field-grown Verticillium dahliae host plants. Environ Microbiol 8: 2136-2149.
-
(2006)
Environ Microbiol
, vol.8
, pp. 2136-2149
-
-
Costa, R.1
Salles, J.F.2
Berg, G.3
Smalla, K.4
-
81
-
-
37549027613
-
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig WG, et al. (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
Fuchs, B.M.4
Ludwig, W.G.5
-
82
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig W, Strunk O, Westram R, Richter L, Meier H, et al. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
-
83
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
-
84
-
-
84879150283
-
Diversity of the candidate phylum Poribacteria in the marine sponge Aplysina fulva
-
In press
-
Hardoim CCP, Cox CJ, Peixoto RS, Rosado AS, Costa R, et al. (2012) Diversity of the candidate phylum Poribacteria in the marine sponge Aplysina fulva. Braz J Microbiol. In press.
-
(2012)
Braz J Microbiol
-
-
Hardoim, C.C.P.1
Cox, C.J.2
Peixoto, R.S.3
Rosado, A.S.4
Costa, R.5
-
85
-
-
33645816587
-
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
-
Keane TM, Creevey CJ, Pentony MM, Naughton TJ, McInerney JO, (2006) Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol Biol 6: 29.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 29
-
-
Keane, T.M.1
Creevey, C.J.2
Pentony, M.M.3
Naughton, T.J.4
McInerney, J.O.5
-
86
-
-
0025267792
-
The general stochastic-model of nucleotide substitution
-
Rodriguez F, Oliver JL, Marin A, Medina JR, (1990) The general stochastic-model of nucleotide substitution. J Theor Biol 142: 485-501.
-
(1990)
J Theor Biol
, vol.142
, pp. 485-501
-
-
Rodriguez, F.1
Oliver, J.L.2
Marin, A.3
Medina, J.R.4
-
87
-
-
0034849408
-
MrBayes: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F, (2001) MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
88
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F, Huelsenbeck JP, (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
89
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A, (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
|