Ion/ion reactions of MALDI-derived peptide ions: Increased sequence coverage via covalent and electrostatic modification upon charge inversion

Analytical Chemistry

Volumn 84, Issue 24, 2012, Pages 10679-10685

  Stutzman, John R ^a   McLuckey, Scott A ^a  

^a PURDUE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE RESIDUE; CHARGE INVERSION; COLLISION-INDUCED DISSOCIATION; COLLISIONAL ACTIVATION; COVALENT MODIFICATIONS; DIANIONS; ELECTROSTATIC COMPLEXES; ELECTROSTATIC MODIFICATION; GAS-PHASE ION/ION REACTIONS; GASPHASE; ION/ION REACTIONS; MATRIX ASSISTED LASER DESORPTION/IONIZATION; NON-COVALENT INTERACTION; PEPTIDE IONS; PRIMARY AMINES; SCHIFF-BASE; TANDEM MASS SPECTROMETRY; TRYPTIC PEPTIDES;

ARGININE; ATMOSPHERIC PRESSURE; CHEMICAL REACTIONS; ELECTROSTATICS; FUNCTIONAL GROUPS; MASS SPECTROMETRY; NEGATIVE IONS; POSITIVE IONS;

PEPTIDES;

PEPTIDE;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; GENETICS; MASS SPECTROMETRY; METHODOLOGY; MOLECULAR GENETICS; STATIC ELECTRICITY;

AMINO ACID SEQUENCE; MOLECULAR SEQUENCE DATA; PEPTIDES; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; STATIC ELECTRICITY;

EID: 84871332305     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac302374p     Document Type: Article

References (58)

1. Allen, G. Sequencing of Proteins and Peptides; Elsevier/North-Holland: New York, 1981.
2. Karas, M.; Bachman, D.; Bahr, U.; Hillenkamp, F. Int. J. Mass Spectrom. Ion Processes 1987, 78, 53-68
3. Tanaka, K.; Ido, Y.; Akita, S.; Yoshida, Y.; Yoshida, T. Rapid Commun. Mass Spectrom. 1988, 2, 151-153
4. Yamashita, M.; Fenn, J. B. J. Phys. Chem. 1984, 88, 4451-4459
5. Bieman, K.; Martin, S. A. Mass Spectrom. Rev. 1987, 6, 1-75
6. Aebersold, R.; Mann, M. Nature 2003, 422, 198-207
7. Hunt, D. F.; Yates, J.; Shabanowitz, J.; Winston, S.; Hauer, C. R. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 6233-6237
8. Dongre, A. R.; Jones, J. L.; Somogyi, A.; Wysocki, V. H. J. Am. Chem. Soc. 1996, 118, 8365-8374
9. Electrospray and MALDI Mass Spectrometry: Fundamentals, Instrumentation, Practicalities, and Biological Applications; Cole, R. M., Ed.; John Wiley and Sons: Hoboken, NJ, 2010.
10. Medzihradszky, K. F.; Campbell, J. M.; Baldwin, M. A.; Falick, A. M.; Juhasz, P.; Vestal, M. L.; Burlingame, A. L. Anal. Chem. 2000, 72, 552-558
11. Shevchenko, A.; Loboda, A.; Shevchenko, A.; Ens, W.; Standing, K. G. Anal. Chem. 2000, 72, 2132-2141
12. Schwartz, J. C.; Bier, M. E. Rapid Commun. Mass Spectrom. 1993, 7, 27-32
13. Chambers, D. M.; Goeringer, D. E.; McLuckey, S. A.; Glish, G. L. Anal. Chem. 1993, 65, 14-20
14. Jonscher, K.; Currie, G.; McCormack, A. L.; Yates, J. R. Rapid Commun. Mass Spectrom. 1993, 7, 20-26
15. Qin, J.; Steenvoorden, R. J. J. M.; Chait, B. T. Anal. Chem. 1996, 68, 1784-1791
16. Laiko, V. V.; Moyer, S. C.; Cotter, R. J. Anal. Chem. 2000, 72, 5239-5243
17. Qin, J.; Chait, B. T. Anal. Chem. 1996, 86, 2108-2112
18. Kaufmann, R.; Spengler, B.; Lutzenkichen, F. Rapid Commun. Mass Spectrom. 1993, 7, 902-910
19. Qin, J.; Fenyo, D.; Zhao, Y.; Hall, W. W.; Chao, D. M.; Wilson, C. J.; Young, R. A.; Chait, B. T. Anal. Chem. 1997, 69, 3995-4001
20. Biemann, K. In Methods in Enzymology; McCloskey, J. A., Ed.; Academic Press: San Diego, CA, 1990; p 445.
21. Biemann, K. Biomed. Environ. Mass Spectrom. 1988, 16, 99-111
22. Keough, T.; Lacey, M. P.; Strife, R. J. Rapid Commun. Mass Spectrom. 2001, 15, 2227-2239
23. Huang, Z.; Wu, J.; Roth, K. D. W.; Yang, Y.; Gage, D. A.; Watson, J. T. Anal. Chem. 1997, 69, 137-144
24. Bartlet-Jones, M.; Jeffery, W. A.; Hanesen, H. F.; Pappin, D. J. C.; Cottrell, J. Rapid Commun. Mass Spectrom. 1994, 8, 737-742
25. Keough, T.; Youngquist, R.; Lacey, M. P. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 7131-7136
26. Keough, T.; Youngquist, R.; Lacey, M. P. Anal. Chem. 2003, 75, 156A-165A
27. McLuckey, S. A.; Huang, T.-Y. Anal. Chem. 2009, 81, 8669-8676
28. McLuckey, S. A. Eur. J. Mass Spectrom. 2010, 16, 429-436
29. McLuckey, S. A.; Mentinova, M. J. Am. Soc. Mass Spectrom. 2011, 22, 3-12
30. Stephenson, J. L., Jr.; McLuckey, S. A. J. Am. Chem. Soc. 1996, 118, 7390-7397
31. Stephenson, J. L., Jr.; McLuckey, S. A. Anal. Chem. 1996, 68, 4026-4032
32. He, M.; McLuckey, S. A. J. Am. Chem. Soc. 2003, 125, 7756-7757
33. He, M.; McLuckey, S. A. Anal. Chem. 2004, 76, 4189-4192
34. He, M.; Emory, J. F.; McLuckey, S. A. Anal. Chem. 2005, 77, 3173-3182
35. Syka, J. E. P.; Coon, J. J.; Schroeder, M. J.; Shabanowitz, J.; Hunt, D. F. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9528-9533
36. Coon, J. J.; Shabanowitz, J.; Hunt, D. F.; Syka, J. E. P. J. Am. Soc. Mass Spectrom. 2005, 16, 880-882
37. Newton, K. A.; Amunugama, R.; McLuckey, S. A. J. Phys. Chem. A 2005, 109, 3608-3616
38. Stutzman, J. R.; Luongo, C. A.; McLuckey, S. A. J. Mass Spectrom. 2012, 47, 669-675
39. Han, H.; McLuckey, S. A. J. Am. Chem. Soc. 2009, 131, 12884-12885
40. Mentinova, M.; McLuckey, S. A. J. Am. Chem. Soc. 2010, 132, 18248-18257
41. McGee, W. M.; Mentinova, M.; McLuckey, S. A. J. Am. Chem. Soc. 2012, 134, 11412-11414
42. Laiko, V. V.; Baldwin, M. A.; Burlingame, A. L. Anal. Chem. 2000, 72, 652-657
43. Schneider, B. B.; Covey, T. R. J. Am. Soc. Mass Spectrom. 2007, 18, 991-996
44. Hassell, K. M.; Stutzman, J. R.; McLuckey, S. A. Anal. Chem. 2010, 82, 1594-1597
45. Stutzman, J. R.; Hassel, K. M.; McLuckey, S. A. Int. J. Mass Spectrom. 2012, 312, 195-200
46. Han, H.; Xia, Y.; McLuckey, S. A. J. Proteome Res. 2007, 6, 3062-3069
47. Xia, Y.; Wu, J.; Londry, F. A.; Hager, J. W.; McLuckey, S. A. J. Am. Soc. Mass Spectrom. 2005, 16, 71-81
48. Schneider, B. B.; Covey, T. R. Multiple Sample Sources for Use with Mass Spectrometers, and Apparatus, Devices, and Methods Therefor. U.S. Patent 7,679,053 B2, March 16, 2010.
49. Liang, X.; Xia, Y.; McLuckey, S. A. Anal. Chem. 2006, 78, 3208-3212
50. Liang, X.; Han, H.; Xia, Y.; McLuckey, S. A. J. Am. Soc. Mass Spectrom. 2007, 18, 369-376
51. Londry, F. A.; Hager, J. W. J. Am. Soc. Mass Spectrom. 2003, 14, 1130-1147
52. Gu, C.; Tsaprailis, G.; Breci, L.; Wysocki, V. Anal. Chem. 2000, 72, 5804-5813
53. Harrison, A. G.; Young, A. B. J. Mass Spectrom. 2000, 40, 1176-1183
54. Roepstorff, P.; Fohlman, J. Biomed. Mass Spectrom. 1984, 11, 601-602
55. Gross, M. L. Int. J. Mass Spectrom. 1992, 118/119, 137-165
56. Cheng, C.; Gross., M. L. Mass Spectrom. Rev. 2000, 19, 398-420
57. Yalcin, T.; Khouw, C.; Csizmadia, I. G.; Peterson, M. R.; Harrison, A. G. J. Am. Soc. Mass Spectrom. 1995, 6, 1165-1174
58. Yalcin, T.; Csizmadia, I. G.; Peterson, M. R.; Harrison, A. G. J. Am. Soc. Mass Spectrom. 1996, 7, 233-242