메뉴 건너뛰기




Volumn 30, Issue 2, 2013, Pages 173-185

Geomicrobial Kinetics: Extrapolating Laboratory Studies to Natural Environments

Author keywords

geomicrobial kinetics; growth yield; half saturation constant; rate constant; specific maintenance rate; sulfate reduction; thermodynamic control

Indexed keywords

GEOMICROBIOLOGY; METABOLISM; MICROORGANISM; OXIDATION; PHYSIOLOGY; THERMODYNAMICS;

EID: 84871320667     PISSN: 01490451     EISSN: 15210529     Source Type: Journal    
DOI: 10.1080/01490451.2011.653084     Document Type: Article
Times cited : (34)

References (93)
  • 1
    • 0017807167 scopus 로고
    • Analysis of double-substrate limited growth
    • Bader, FG. 1978. Analysis of double-substrate limited growth. Biotechnol Bioeng, 20: 183-202.
    • (1978) Biotechnol Bioeng , vol.20 , pp. 183-202
    • Bader, F.G.1
  • 3
    • 54949153764 scopus 로고    scopus 로고
    • Origin of microbiological zoning in groundwater flows
    • Bethke, C M, Ding, D, Jin, Q and Sanford, R A. 2008. Origin of microbiological zoning in groundwater flows. Geology, 36: 739-742.
    • (2008) Geology , vol.36 , pp. 739-742
    • Bethke, C.M.1    Ding, D.2    Jin, Q.3    Sanford, R.A.4
  • 4
    • 0021283205 scopus 로고
    • The dependence of bacterial sulfate reduction on sulfate concentration in marine sediments
    • Boudrea, B P and Westrich, J T. 1984. The dependence of bacterial sulfate reduction on sulfate concentration in marine sediments. Geochim Cosmochim Acta, 48: 2503-2516.
    • (1984) Geochim Cosmochim Acta , vol.48 , pp. 2503-2516
    • Boudrea, B.P.1    Westrich, J.T.2
  • 5
    • 0021880980 scopus 로고
    • Bacterial biovolume and biomass estimations
    • Bratbak, G. 1985. Bacterial biovolume and biomass estimations. Appl Environ Microbiol, 49: 1488-1493.
    • (1985) Appl Environ Microbiol , vol.49 , pp. 1488-1493
    • Bratbak, G.1
  • 6
    • 0021128938 scopus 로고
    • Bacterial dry matter content and biomass estimations
    • Bratbak, G and Dundas, I. 1984. Bacterial dry matter content and biomass estimations. Appl Environ Microbiol, 48: 755-757.
    • (1984) Appl Environ Microbiol , vol.48 , pp. 755-757
    • Bratbak, G.1    Dundas, I.2
  • 7
    • 0034700295 scopus 로고    scopus 로고
    • Geochemical modeling of iron, sulfur, oxygen and carbon in a coastal plain aquifer
    • Brown, C J, Schoonen, M AA and Candela, J L. 2000. Geochemical modeling of iron, sulfur, oxygen and carbon in a coastal plain aquifer. J Hydrol, 237: 147-168.
    • (2000) J Hydrol , vol.237 , pp. 147-168
    • Brown, C.J.1    Schoonen, M.A.A.2    Candela, J.L.3
  • 9
    • 0027496404 scopus 로고
    • Nutrient-limited microbial growth kinetics: overview and recent advances
    • Button, DK. 1993. Nutrient-limited microbial growth kinetics: overview and recent advances. Anton Leeuwen, 63: 225-235.
    • (1993) Anton Leeuwen , vol.63 , pp. 225-235
    • Button, D.K.1
  • 10
    • 4644281377 scopus 로고    scopus 로고
    • Experimental and theoretical bases of specific affinity, a cytoarchitecture-based formulation of nutrient collection proposed to supercede the Michaelis-Menten paradigm of microbial kinetics
    • Button, D K, Robertson, B, Gustafson, E and Zhao, X. 2004. Experimental and theoretical bases of specific affinity, a cytoarchitecture-based formulation of nutrient collection proposed to supercede the Michaelis-Menten paradigm of microbial kinetics. Appl Environ Microbiol, 70: 5511-5521.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 5511-5521
    • Button, D.K.1    Robertson, B.2    Gustafson, E.3    Zhao, X.4
  • 12
    • 0025311782 scopus 로고
    • Rates of microbial metabolism in deep coastal plain aquifers
    • Chapelle, F H and Lovley, D R. 1990. Rates of microbial metabolism in deep coastal plain aquifers. Appl Environ Microbiol, 56: 1865-1874.
    • (1990) Appl Environ Microbiol , vol.56 , pp. 1865-1874
    • Chapelle, F.H.1    Lovley, D.R.2
  • 13
    • 0026006215 scopus 로고
    • Prokaryotic osmoregulation: Genetics and physiology
    • Csonka, L N and Hanson, A D. 1991. Prokaryotic osmoregulation: Genetics and physiology. Ann Rev Microbiol, 45: 569-606.
    • (1991) Ann Rev Microbiol , vol.45 , pp. 569-606
    • Csonka, L.N.1    Hanson, A.D.2
  • 14
    • 0032426261 scopus 로고    scopus 로고
    • Bacterial growth efficiency in natural aquatic systems
    • del Giorgio, P A and Cole, J J. 1998. Bacterial growth efficiency in natural aquatic systems. Ann Rev Ecol System, 29: 503-541.
    • (1998) Ann Rev Ecol System , vol.29 , pp. 503-541
    • del Giorgio, P.A.1    Cole, J.J.2
  • 15
    • 0004228681 scopus 로고
    • The LLNL thermodynamical database, Livermore, CA: Lawrence Livermore National Laboratory Report UCRL-21658
    • Delany, J M and Lundeen, S R. 1990. "The LLNL thermodynamical database, Livermore, CA: Lawrence Livermore National Laboratory Report UCRL-21658". 150
    • (1990) , pp. 150
    • Delany, J.M.1    Lundeen, S.R.2
  • 16
    • 0026323102 scopus 로고
    • On multiple-nutrient-limited growth of microorganisms, with special reference to dual limitation by carbon and nitrogen substrates
    • Egli, T. 1991. On multiple-nutrient-limited growth of microorganisms, with special reference to dual limitation by carbon and nitrogen substrates. Anton van Leeuwen, 60: 225-234.
    • (1991) Anton van Leeuwen , vol.60 , pp. 225-234
    • Egli, T.1
  • 17
    • 0030200309 scopus 로고    scopus 로고
    • Adaptation to life at micromolar nutrient levels: The regulation of Escherichia coli glucose transport by endoinduction and cAMP
    • Ferenci, T. 1996. Adaptation to life at micromolar nutrient levels: The regulation of Escherichia coli glucose transport by endoinduction and cAMP. FEMS Microbiol Rev, 18: 301-317.
    • (1996) FEMS Microbiol Rev , vol.18 , pp. 301-317
    • Ferenci, T.1
  • 18
    • 0030030007 scopus 로고    scopus 로고
    • Variability in kinetic parameter estimates: A review of possible causes and a proposed terminology
    • Grady, C PL, Smets, B F and Barbeau, D S. 1996. Variability in kinetic parameter estimates: A review of possible causes and a proposed terminology. Water Res, 30: 742-748.
    • (1996) Water Res , vol.30 , pp. 742-748
    • Grady, C.P.L.1    Smets, B.F.2    Barbeau, D.S.3
  • 19
    • 0001609914 scopus 로고
    • Thermodynamics of hydrothermal systems at elevated temperatures and pressures
    • Helgeson, HC. 1969. Thermodynamics of hydrothermal systems at elevated temperatures and pressures. Amer J Sci, 267: 729-804.
    • (1969) Amer J Sci , vol.267 , pp. 729-804
    • Helgeson, H.C.1
  • 20
    • 0035030255 scopus 로고    scopus 로고
    • Sulphate reduction and sulphur cycling in lake sediments: A review
    • Holmer, M and Storkholm, P. 2001. Sulphate reduction and sulphur cycling in lake sediments: A review. Freshwater Biol, 46: 431-451.
    • (2001) Freshwater Biol , vol.46 , pp. 431-451
    • Holmer, M.1    Storkholm, P.2
  • 21
    • 0000513138 scopus 로고
    • Assimilation of dairy wastes by activate sludge. II. The equation of synthesis and rate of oxygen utilization
    • Hoover, S R and Porges, N. 1952. Assimilation of dairy wastes by activate sludge. II. The equation of synthesis and rate of oxygen utilization. Sewage Indust Wastes, 24: 306-312.
    • (1952) Sewage Indust Wastes , vol.24 , pp. 306-312
    • Hoover, S.R.1    Porges, N.2
  • 23
    • 0002384797 scopus 로고
    • Effect of temperature, pH, water activity, and pressure on growth
    • In: Neidhardt F C, Ingraham J L, Low K B, Magasanik B, Schaechter M, Umbarger H E, editors Washington, DC, Washington, DC,: American Society for Microbiology
    • Ingraham, JL. 1987. "Effect of temperature, pH, water activity, and pressure on growth". In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology, Edited by: Neidhardt, F C, Ingraham, J L, Low, K B, Magasanik, B, Schaechter, M and Umbarger, H E. 1543-1554. Washington, DC: American Society for Microbiology.
    • (1987) Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology , pp. 1543-1554
    • Ingraham, J.L.1
  • 24
    • 0021347895 scopus 로고
    • Kinetics of sulfate and acetate uptake by Desulfobacter postgatei
    • Ingvorsen, K, Zehnder, A JB and Jorgensen, B B. 1984. Kinetics of sulfate and acetate uptake by Desulfobacter postgatei. Appl Environ Microbiol, 47: 403-408.
    • (1984) Appl Environ Microbiol , vol.47 , pp. 403-408
    • Ingvorsen, K.1    Zehnder, A.J.B.2    Jorgensen, B.B.3
  • 25
    • 84944811943 scopus 로고
    • Growth of marine bacteria at limiting concentrations of organic carbon in seawater
    • Jannasch, HW. 1967. Growth of marine bacteria at limiting concentrations of organic carbon in seawater. Limnol Oceanogr, 12: 264-271.
    • (1967) Limnol Oceanogr , vol.12 , pp. 264-271
    • Jannasch, H.W.1
  • 26
    • 0036789483 scopus 로고    scopus 로고
    • Kinetics of electron transfer through the respiratory chain
    • Jin, Q and Bethke, C M. 2002. Kinetics of electron transfer through the respiratory chain. Biophys J, 83: 1797-1808.
    • (2002) Biophys J , vol.83 , pp. 1797-1808
    • Jin, Q.1    Bethke, C.M.2
  • 27
    • 0037394934 scopus 로고    scopus 로고
    • A new rate law describing microbial respiration
    • Jin, Q and Bethke, C M. 2003. A new rate law describing microbial respiration. Appl Environ Microbiol, 69: 2340-2348.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2340-2348
    • Jin, Q.1    Bethke, C.M.2
  • 28
    • 14844312123 scopus 로고    scopus 로고
    • Predicting the rate of microbial respiration in geochemical environments
    • Jin, Q and Bethke, C M. 2005. Predicting the rate of microbial respiration in geochemical environments. Geochim Cosmochim Acta, 69: 1133-1143.
    • (2005) Geochim Cosmochim Acta , vol.69 , pp. 1133-1143
    • Jin, Q.1    Bethke, C.M.2
  • 29
    • 34547771739 scopus 로고    scopus 로고
    • The thermodynamics and kinetics of microbial metabolism
    • Jin, Q and Bethke, C M. 2007. The thermodynamics and kinetics of microbial metabolism. Amer J Sci, 307: 643-677.
    • (2007) Amer J Sci , vol.307 , pp. 643-677
    • Jin, Q.1    Bethke, C.M.2
  • 30
    • 84871326330 scopus 로고    scopus 로고
    • Cellular energy conservation and the rate of microbial sulfate reduction
    • Jin, Q and Bethke, C M. 2009. Cellular energy conservation and the rate of microbial sulfate reduction. Geology, 36: 739-742.
    • (2009) Geology , vol.36 , pp. 739-742
    • Jin, Q.1    Bethke, C.M.2
  • 31
    • 80052860571 scopus 로고    scopus 로고
    • Microbial physiology-based model of ethanol metabolism in subsurface sediments
    • Jin, Q and Roden, E E. 2011. Microbial physiology-based model of ethanol metabolism in subsurface sediments. J Contam Hydrol, 125: 1-12.
    • (2011) J Contam Hydrol , vol.125 , pp. 1-12
    • Jin, Q.1    Roden, E.E.2
  • 32
    • 0031719418 scopus 로고    scopus 로고
    • Uptake and synthesis of compatible solutes as microbial stress responses to high-osmolality environments
    • Kempf, B and Bremer, E. 1998. Uptake and synthesis of compatible solutes as microbial stress responses to high-osmolality environments. Arch Microbiol, 170: 319-330.
    • (1998) Arch Microbiol , vol.170 , pp. 319-330
    • Kempf, B.1    Bremer, E.2
  • 33
    • 0031719199 scopus 로고    scopus 로고
    • Growth kinetics of suspended microbial cells: from single-substrate-controlled growth to mixed-substrate kinetics
    • Kovárová-Kovar, K and Egli, T. 1998. Growth kinetics of suspended microbial cells: from single-substrate-controlled growth to mixed-substrate kinetics. Microbiol Mol Biol Rev, 62: 646-666.
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 646-666
    • Kovárová-Kovar, K.1    Egli, T.2
  • 34
    • 0026762542 scopus 로고
    • Protonmotive force in freshwater sulfate-reducing bacteria, and its role in sulfate accumulation in Desulfobulus propionicus
    • Kreke, B and Cypionka, H. 1992. Protonmotive force in freshwater sulfate-reducing bacteria, and its role in sulfate accumulation in Desulfobulus propionicus. Arch Microbiol, 158: 183-187.
    • (1992) Arch Microbiol , vol.158 , pp. 183-187
    • Kreke, B.1    Cypionka, H.2
  • 35
    • 0021554562 scopus 로고
    • 2 balance and methane production in the sediments of Lake Washington
    • 2 balance and methane production in the sediments of Lake Washington. Limnol Oceanogr, 29: 1218-1230.
    • (1984) Limnol Oceanogr , vol.29 , pp. 1218-1230
    • Kuivila, K.M.1    Murray, J.W.2
  • 36
    • 0024526211 scopus 로고
    • Methane production, sulfate reduction and competition for substrates in the sediments of Lake Washington
    • Kuivila, K M, Murray, J W, Devol, A H and Novelli, P C. 1989. Methane production, sulfate reduction and competition for substrates in the sediments of Lake Washington. Geochim Cosmochim Acta, 53: 409-416.
    • (1989) Geochim Cosmochim Acta , vol.53 , pp. 409-416
    • Kuivila, K.M.1    Murray, J.W.2    Devol, A.H.3    Novelli, P.C.4
  • 37
    • 0021520773 scopus 로고
    • Double-substrate-limited growth of Escherichia coli
    • Lee, A L, Ataai, M M and Shuler, M L. 1984. Double-substrate-limited growth of Escherichia coli. Biotechnol Bioeng, 26: 1398-1401.
    • (1984) Biotechnol Bioeng , vol.26 , pp. 1398-1401
    • Lee, A.L.1    Ataai, M.M.2    Shuler, M.L.3
  • 38
    • 0030427557 scopus 로고    scopus 로고
    • Sulfate reduction in profundal sediments in Lake Kizaki
    • Li, J-H, Takii, S, Kotakemori, R and Hayashi, H. 1996. Sulfate reduction in profundal sediments in Lake Kizaki. Japan. Hydrobiol, 333: 201-208.
    • (1996) Japan. Hydrobiol , vol.333 , pp. 201-208
    • Li, J.-H.1    Takii, S.2    Kotakemori, R.3    Hayashi, H.4
  • 39
    • 0020660776 scopus 로고
    • Sulfate reducers can outcompete methanogens at freshwater sulfate concentrations
    • Lovley, D R and Klug, M J. 1983. Sulfate reducers can outcompete methanogens at freshwater sulfate concentrations. Appl Environ Microbiol, 45: 187-192.
    • (1983) Appl Environ Microbiol , vol.45 , pp. 187-192
    • Lovley, D.R.1    Klug, M.J.2
  • 40
    • 0022439592 scopus 로고
    • Model for the distribution of sulfate reduction and methanogenesis in freshwater sediments
    • Lovley, D R and Klug, M J. 1986. Model for the distribution of sulfate reduction and methanogenesis in freshwater sediments. Geochim Cosmochim Acta, 50: 11-18.
    • (1986) Geochim Cosmochim Acta , vol.50 , pp. 11-18
    • Lovley, D.R.1    Klug, M.J.2
  • 42
    • 0026005223 scopus 로고
    • Microbial production of organic acids in aquitard sediments and its role in aquifer geochemistry
    • McMahon, P B and Chapelle, F H. 1991. Microbial production of organic acids in aquitard sediments and its role in aquifer geochemistry. Nature, 349: 233-235.
    • (1991) Nature , vol.349 , pp. 233-235
    • McMahon, P.B.1    Chapelle, F.H.2
  • 44
    • 0001639179 scopus 로고
    • The growth of bacterial cultures
    • Monod, J. 1949. The growth of bacterial cultures. Ann Rev Microbiol, 3: 371-394.
    • (1949) Ann Rev Microbiol , vol.3 , pp. 371-394
    • Monod, J.1
  • 46
    • 0032460992 scopus 로고    scopus 로고
    • Estimation of microbial respiration rates in groundwater by geochemical modeling constrained with stable isotopes
    • Murphy, E M and Schramke, J A. 1998. Estimation of microbial respiration rates in groundwater by geochemical modeling constrained with stable isotopes. Geochim Cosmochim Acta, 62: 3395-3406.
    • (1998) Geochim Cosmochim Acta , vol.62 , pp. 3395-3406
    • Murphy, E.M.1    Schramke, J.A.2
  • 47
    • 0031439437 scopus 로고    scopus 로고
    • Sediment bacteria: Who's there, what are they doing, and what's new?
    • Nealson, KH. 1997. Sediment bacteria: Who's there, what are they doing, and what's new?. Ann Rev Earth Planet Sci, 25: 403-434.
    • (1997) Ann Rev Earth Planet Sci , vol.25 , pp. 403-434
    • Nealson, K.H.1
  • 48
    • 0002120173 scopus 로고
    • The input and mineralization of organic carbon in anaerobic aquatic sediments
    • Nedwell, DB. 1984. The input and mineralization of organic carbon in anaerobic aquatic sediments. Adv Microb Ecol, 7: 93-131.
    • (1984) Adv Microb Ecol , vol.7 , pp. 93-131
    • Nedwell, D.B.1
  • 49
    • 0037052456 scopus 로고    scopus 로고
    • Geomicrobiology: How molecular-scale interactions underpin biogeochemical systems
    • Newman, D K and Banfield, J F. 2002. Geomicrobiology: How molecular-scale interactions underpin biogeochemical systems. Science, 296: 1071-1077.
    • (2002) Science , vol.296 , pp. 1071-1077
    • Newman, D.K.1    Banfield, J.F.2
  • 51
    • 0029125546 scopus 로고
    • Desulforhabdus amnigenus gen. nov. sp. nov., a sulfate reducer isolated from anaerobic granular sludge
    • Oude Elferink, SJWH, Maas, R N, Harmsen, H JM and Stams, A JM. 1995. Desulforhabdus amnigenus gen. nov. sp. nov., a sulfate reducer isolated from anaerobic granular sludge. Arch Microbiol, 164: 119-124.
    • (1995) Arch Microbiol , vol.164 , pp. 119-124
    • Oude Elferink, S.J.W.H.1    Maas, R.N.2    Harmsen, H.J.M.3    Stams, A.J.M.4
  • 53
    • 0032947993 scopus 로고    scopus 로고
    • Desulfobacca acetoxidans gen. nov. sp. nov., a novel acetate-degrading sulfate reducer isolated from sulfidogenic granular sludge
    • Oude Elferink, SJWH, Vliet, A-vWM, Bogte, J J and Stams, A JM. 1999. Desulfobacca acetoxidans gen. nov. sp. nov., a novel acetate-degrading sulfate reducer isolated from sulfidogenic granular sludge. Inter J Syst Bacteriol, 49: 345-350.
    • (1999) Inter J Syst Bacteriol , vol.49 , pp. 345-350
    • Oude Elferink, S.J.W.H.1    Vliet, A.-V.W.M.2    Bogte, J.J.3    Stams, A.J.M.4
  • 54
    • 70349463649 scopus 로고    scopus 로고
    • Principles of enrichment, isolation, cultivation and preservation of prokaryotes
    • In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, editors
    • Overmann, J. 2006. "Principles of enrichment, isolation, cultivation and preservation of prokaryotes". In The Prokaryotes. Singapore: Springer Edited by: Dworkin, M, Falkow, S, Rosenberg, E, Schleifer, K-H and Stackebrandt, E. 80-136.
    • (2006) The Prokaryotes. Singapore: Springer , pp. 80-136
    • Overmann, J.1
  • 55
    • 32944481453 scopus 로고    scopus 로고
    • Kinetics of microbial sulfate reduction in estuarine sediments
    • Pallud, C and Van Cappellen, P. 2006. Kinetics of microbial sulfate reduction in estuarine sediments. Geochim Cosmochim Acta, 70: 1148-1162.
    • (2006) Geochim Cosmochim Acta , vol.70 , pp. 1148-1162
    • Pallud, C.1    van Cappellen, P.2
  • 56
    • 43049089438 scopus 로고
    • The maintenance energy of bacteria in growing cultures. Proc Roy Soc London
    • Pirt, SJ. 1965. The maintenance energy of bacteria in growing cultures. Proc Roy Soc London. Ser B Biol Sci, 163: 224-231.
    • (1965) Ser B Biol Sci , vol.163 , pp. 224-231
    • Pirt, S.J.1
  • 57
    • 1842585021 scopus 로고    scopus 로고
    • Temperature dependence of metabolic rates for microbial growth, maintenance, and survival
    • Price, P B and Sowers, T. 2004. Temperature dependence of metabolic rates for microbial growth, maintenance, and survival. Proc Natl Acad Sci, 101: 4631-4636.
    • (2004) Proc Natl Acad Sci , vol.101 , pp. 4631-4636
    • Price, P.B.1    Sowers, T.2
  • 58
    • 34248204828 scopus 로고    scopus 로고
    • Dissimilatory sulfate- and sulfur-reducing prokaryotes
    • In: Dworkin M, Falkow S, Rosenberg E, Schleifer K.-H, Stackebrandt E, editors New York, New York,: Springer-Verlag
    • Rabus, R, Hansen, T and Widdel, F. 2006. "Dissimilatory sulfate- and sulfur-reducing prokaryotes". In Prokaryotes, Volume 2, Edited by: Dworkin, M, Falkow, S, Rosenberg, E, Schleifer, K.-H and Stackebrandt, E. 659-768. New York: Springer-Verlag.
    • (2006) Prokaryotes, Volume 2 , pp. 659-768
    • Rabus, R.1    Hansen, T.2    Widdel, F.3
  • 59
    • 0033043681 scopus 로고    scopus 로고
    • Temperature dependence of inorganic nitrogen uptake: reduced affinity for nitrate at suboptimal temperatures in both algae and bacteria
    • Reay, D S, Nedwell, D B, Priddle, J and Ellis-Evans, J C. 1999. Temperature dependence of inorganic nitrogen uptake: reduced affinity for nitrate at suboptimal temperatures in both algae and bacteria. Appl Environ Microbiol, 65: 2577-2584.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2577-2584
    • Reay, D.S.1    Nedwell, D.B.2    Priddle, J.3    Ellis-Evans, J.C.4
  • 60
    • 0020646690 scopus 로고
    • Rates of biogeochemical processes in anoxic sediments
    • Reeburgh, WS. 1983. Rates of biogeochemical processes in anoxic sediments. Ann Rev Earth Planet Sci, 11: 269-298.
    • (1983) Ann Rev Earth Planet Sci , vol.11 , pp. 269-298
    • Reeburgh, W.S.1
  • 62
    • 79953232381 scopus 로고    scopus 로고
    • Thermodynamics of microbial growth coupled to metabolism of glucose, ethanol, short-chain organic acids, and hydrogen
    • Roden, E E and Jin, Q. 2011. Thermodynamics of microbial growth coupled to metabolism of glucose, ethanol, short-chain organic acids, and hydrogen. Appl Environ Microbiol, 77: 1907-1909.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 1907-1909
    • Roden, E.E.1    Jin, Q.2
  • 63
    • 0027332664 scopus 로고
    • Inorganic sulfur turnover in oligohaline estuarine sediments
    • Roden, E E and Tuttle, J. 1993. Inorganic sulfur turnover in oligohaline estuarine sediments. Biogeochemistry, 22: 81-105.
    • (1993) Biogeochemistry , vol.22 , pp. 81-105
    • Roden, E.E.1    Tuttle, J.2
  • 64
    • 0042126784 scopus 로고    scopus 로고
    • Kinetics of microbially mediated reactions: dissimilatory sulfate reduction in saltmarsh sediments (Sapelo Island, Georgia, USA)
    • Roychoudhury, A N, Van Cappellen, P, Kostka, J E and Viollier, E. 2003. Kinetics of microbially mediated reactions: dissimilatory sulfate reduction in saltmarsh sediments (Sapelo Island, Georgia, USA). Estuarine Coastal Shelf Sci, 56: 1001-1010.
    • (2003) Estuarine Coastal Shelf Sci , vol.56 , pp. 1001-1010
    • Roychoudhury, A.N.1    van Cappellen, P.2    Kostka, J.E.3    Viollier, E.4
  • 65
    • 0032029942 scopus 로고    scopus 로고
    • A plug flow-through reactor for studying biogeochemical reactions in undisturbed aquatic sediments
    • Roychoudhury, A N, Viollier, E and Van Cappellen, P. 1998. A plug flow-through reactor for studying biogeochemical reactions in undisturbed aquatic sediments. Appl Geochem, 13: 269-280.
    • (1998) Appl Geochem , vol.13 , pp. 269-280
    • Roychoudhury, A.N.1    Viollier, E.2    van Cappellen, P.3
  • 66
    • 69849084132 scopus 로고    scopus 로고
    • Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation
    • Scheibe, T D, Mahadevan, R, Fang, Y, Garg, S, Long, P E and Lovley, D R. 2009. Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation. Microb Biotechnol, 2: 274-286.
    • (2009) Microb Biotechnol , vol.2 , pp. 274-286
    • Scheibe, T.D.1    Mahadevan, R.2    Fang, Y.3    Garg, S.4    Long, P.E.5    Lovley, D.R.6
  • 67
    • 0002260587 scopus 로고
    • Models for studying the population ecology of mciroorganisms in natural systems
    • In: Hurst C J, editors, New York: John Wiley and Sons
    • Schmidt, SK. 1992. "Models for studying the population ecology of mciroorganisms in natural systems". In Modeling the Metabolic and Physiologic Activities of Microorganisms. New York: John Wiley and Sons Edited by: Hurst, C J. 31-59.
    • (1992) Modeling the Metabolic and Physiologic Activities of Microorganisms , pp. 31-59
    • Schmidt, S.K.1
  • 68
    • 0034530872 scopus 로고    scopus 로고
    • Isolation and characterization of acetate-utilizing anaerobes from a freshwater sediment
    • Scholten, J and Stams, A. 2000. Isolation and characterization of acetate-utilizing anaerobes from a freshwater sediment. Microbial Ecol, 40: 292-299.
    • (2000) Microbial Ecol , vol.40 , pp. 292-299
    • Scholten, J.1    Stams, A.2
  • 69
    • 0020411363 scopus 로고
    • Kinetic mechanism for the ability of sulfate reducers to out-compete methanogens for acetate
    • Schönheit, P, Kristjansson, J K and Thauer, R K. 1982. Kinetic mechanism for the ability of sulfate reducers to out-compete methanogens for acetate. Arch Microbiol, 132: 285-288.
    • (1982) Arch Microbiol , vol.132 , pp. 285-288
    • Schönheit, P.1    Kristjansson, J.K.2    Thauer, R.K.3
  • 70
    • 0015093174 scopus 로고
    • Effect of nutrient concentration on the growth of Escherichia coli
    • Shehata, T E and Marr, A G. 1971. Effect of nutrient concentration on the growth of Escherichia coli. J Bacteriol, 107: 210-216.
    • (1971) J Bacteriol , vol.107 , pp. 210-216
    • Shehata, T.E.1    Marr, A.G.2
  • 71
    • 0021438315 scopus 로고
    • Models for mineralization kinetics with the variables of substrate concentration and population density
    • Simkins, S and Alexander, M. 1984. Models for mineralization kinetics with the variables of substrate concentration and population density. Appl Environ Microbiol, 47: 1299-1306.
    • (1984) Appl Environ Microbiol , vol.47 , pp. 1299-1306
    • Simkins, S.1    Alexander, M.2
  • 72
    • 0000246560 scopus 로고
    • Reduction of sulfur compounds in the sediments of a eutrophic lake basin
    • Smith, R L and Klug, M J. 1981. Reduction of sulfur compounds in the sediments of a eutrophic lake basin. Appl Environ Microbiol, 41: 1230-1237.
    • (1981) Appl Environ Microbiol , vol.41 , pp. 1230-1237
    • Smith, R.L.1    Klug, M.J.2
  • 73
    • 0025893973 scopus 로고
    • +-dependent accumulation of sulfate and thiosulfate in marine sulfate-reducing bacteria
    • +-dependent accumulation of sulfate and thiosulfate in marine sulfate-reducing bacteria. Arch Microbiol, 155: 554-558.
    • (1991) Arch Microbiol , vol.155 , pp. 554-558
    • Stahlmann, J.1    Warthmann, R.2    Cypionka, H.3
  • 74
    • 0031733765 scopus 로고    scopus 로고
    • Reactive transport modeling of natural systems
    • Steefel, C I and van Cappellen, P. 1998. Reactive transport modeling of natural systems. J Hydrol, 209: 1-7.
    • (1998) J Hydrol , vol.209 , pp. 1-7
    • Steefel, C.I.1    van Cappellen, P.2
  • 75
    • 0015910716 scopus 로고
    • A theoretical study on the amount of ATP required for synthesis of microbial cell material
    • Stouthamer, AH. 1973. A theoretical study on the amount of ATP required for synthesis of microbial cell material. Anton van Leeuwen, 39: 545-565.
    • (1973) Anton van Leeuwen , vol.39 , pp. 545-565
    • Stouthamer, A.H.1
  • 77
    • 70450216912 scopus 로고    scopus 로고
    • Evaluation of acetate thresholds under various terminal electron-accepting conditions: application to bioremediation monitoring [Master thesis]
    • College Park, MD, College Park, MD,: University of Maryland
    • Su, X. 2004. "Evaluation of acetate thresholds under various terminal electron-accepting conditions: application to bioremediation monitoring [Master thesis]". College Park, MD: University of Maryland.
    • (2004)
    • Su, X.1
  • 78
    • 3342920601 scopus 로고    scopus 로고
    • Prospects for inferring very large phylogenies by using the neighbor-joining method
    • Tamura, K, Nei, M and Kumar, S. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Natl Acad Sci USA, 101: 11030-11035.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 11030-11035
    • Tamura, K.1    Nei, M.2    Kumar, S.3
  • 79
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K, Peterson, D, Peterson, N, Stecher, G, Nei, M and Kumar, S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, doi:10.1093/molbev/msr121
    • (2011) Molecular Biology and Evolution
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 80
    • 79955442044 scopus 로고    scopus 로고
    • Concurrent low- and high-affinity sulfate reduction kinetics in marine sediment
    • Tarpgaard, I H, Røy, H and Jørgensen, B B. 2011. Concurrent low- and high-affinity sulfate reduction kinetics in marine sediment. Geochim Cosmochim Acta, 75: 2997-3010.
    • (2011) Geochim Cosmochim Acta , vol.75 , pp. 2997-3010
    • Tarpgaard, I.H.1    Røy, H.2    Jørgensen, B.B.3
  • 81
    • 34547527560 scopus 로고    scopus 로고
    • Modeling microbially induced carbon degradation in redox-stratified subsurface environments: Concepts and open questions
    • Thullner, M, Regnier, P and Van Cappellen, P. 2007. Modeling microbially induced carbon degradation in redox-stratified subsurface environments: Concepts and open questions. Geomicrobiol J, 24: 139-155.
    • (2007) Geomicrobiol J , vol.24 , pp. 139-155
    • Thullner, M.1    Regnier, P.2    van Cappellen, P.3
  • 82
    • 0028163345 scopus 로고
    • Sulfate reduction and diffusion in sediments of Little Rock Lake, Wisconsin
    • Urban, N R, Brezonik, P L, Baker, L A and Sherman, L A. 1994. Sulfate reduction and diffusion in sediments of Little Rock Lake, Wisconsin. Limnol Oceanogr, 39: 797-815.
    • (1994) Limnol Oceanogr , vol.39 , pp. 797-815
    • Urban, N.R.1    Brezonik, P.L.2    Baker, L.A.3    Sherman, L.A.4
  • 83
    • 0037396770 scopus 로고    scopus 로고
    • Modeling microbial consortiums as distributed metabolic networks
    • Vallino, JJ. 2003. Modeling microbial consortiums as distributed metabolic networks. Biol Bull, 204: 174-179.
    • (2003) Biol Bull , vol.204 , pp. 174-179
    • Vallino, J.J.1
  • 84
    • 34248582999 scopus 로고    scopus 로고
    • Microbial maintenance: A critical review on its quantification
    • van Bodegom, P. 2007. Microbial maintenance: A critical review on its quantification. Microb Ecol, 53: 513-523.
    • (2007) Microb Ecol , vol.53 , pp. 513-523
    • van Bodegom, P.1
  • 85
    • 0032463021 scopus 로고    scopus 로고
    • Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration
    • Wagner, M, Roger, A J, Flax, J L, Brusseau, G A and Stahl, D A. 1998. Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration. J Bacteriol, 180: 2975-2982.
    • (1998) J Bacteriol , vol.180 , pp. 2975-2982
    • Wagner, M.1    Roger, A.J.2    Flax, J.L.3    Brusseau, G.A.4    Stahl, D.A.5
  • 86
    • 0022601019 scopus 로고
    • The pressure relationships of halophilic and non-halophilic prokaryotic cells determined by using gas vesicles as pressure probes
    • Walsby, AE. 1986. The pressure relationships of halophilic and non-halophilic prokaryotic cells determined by using gas vesicles as pressure probes. FEMS Microbiol Lett, 39: 45-49.
    • (1986) FEMS Microbiol Lett , vol.39 , pp. 45-49
    • Walsby, A.E.1
  • 87
    • 0001439525 scopus 로고
    • New types of acetate-oxidizing, sulfate-reducing Desulfobacter species, D. hydrogenophilus sp. nov., D. latus sp. nov., and D. curvatus sp. nov
    • Widdel, F. 1987. New types of acetate-oxidizing, sulfate-reducing Desulfobacter species, D. hydrogenophilus sp. nov., D. latus sp. nov., and D. curvatus sp. nov. Arch Microbiol, 148: 286-291.
    • (1987) Arch Microbiol , vol.148 , pp. 286-291
    • Widdel, F.1
  • 89
  • 90
    • 0017576568 scopus 로고
    • A new anaerobic, sporing, acetate-oxidizing, sulfate-reducing bacterium, Desulfotomaculum (emend.) acetoxidans
    • Widdel, F and Pfennig, N. 1977. A new anaerobic, sporing, acetate-oxidizing, sulfate-reducing bacterium, Desulfotomaculum (emend.) acetoxidans. Arch Microbiol, 112: 119-122.
    • (1977) Arch Microbiol , vol.112 , pp. 119-122
    • Widdel, F.1    Pfennig, N.2
  • 91
    • 0019591623 scopus 로고
    • Studies on dissimilatory sulfate-reducing bacteria that decompose fatty acids: I. Isolation of new sulfate-reducing bacteria enriched with acetate from saline environments. Description of Desulfobacter postgatei fen. nov., sp. nov
    • Widdel, F and Pfennig, N. 1981. Studies on dissimilatory sulfate-reducing bacteria that decompose fatty acids: I. Isolation of new sulfate-reducing bacteria enriched with acetate from saline environments. Description of Desulfobacter postgatei fen. nov., sp. nov. Arch Microbiol, 129: 395-400.
    • (1981) Arch Microbiol , vol.129 , pp. 395-400
    • Widdel, F.1    Pfennig, N.2
  • 92
    • 84983828491 scopus 로고
    • The validity of the application of simple kinetic analysis to heterogeneous microbial populations
    • Williams, PJL. 1973. The validity of the application of simple kinetic analysis to heterogeneous microbial populations. Limnol Oceanogr, 18: 159-165.
    • (1973) Limnol Oceanogr , vol.18 , pp. 159-165
    • Williams, P.J.L.1
  • 93
    • 0009028490 scopus 로고    scopus 로고
    • Modeling and measuring biogeochemical reactions: system consistency, data needs, and rate formulations
    • Yeh, G-T, Burgos, W D and Zachara, J M. 2001. Modeling and measuring biogeochemical reactions: system consistency, data needs, and rate formulations. Adv Environ Res, 5: 219-237.
    • (2001) Adv Environ Res , vol.5 , pp. 219-237
    • Yeh, G.-T.1    Burgos, W.D.2    Zachara, J.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.