메뉴 건너뛰기




Volumn 10, Issue 78, 2013, Pages

DNA-based species detection capabilities using laser transmission spectroscopy

Author keywords

Ballast; DNA detection; Dreissena; Invasive species; Laser transmission spectroscopy; Polymerase chain reaction

Indexed keywords

BALLAST (RAILROAD TRACK); BIOCONTROL; DNA; LASERS; NANOPARTICLES; OLIGONUCLEOTIDES; POLYMERASE CHAIN REACTION; POLYSTYRENES; PROBES;

EID: 84871287057     PISSN: 17425689     EISSN: 17425662     Source Type: Journal    
DOI: 10.1098/rsif.2012.0637     Document Type: Article
Times cited : (19)

References (36)
  • 1
    • 34047257544 scopus 로고    scopus 로고
    • The magnitude and consequences of bioinvasions in marine ecosystems: Implications for conservation biology
    • eds EA Norse, LB Crowder Washington, DC: Island Press
    • Carlton JT, Ruiz GM. 2005 The magnitude and consequences of bioinvasions in marine ecosystems: implications for conservation biology. In Marine conservation biology: the science of maintaining the sea's biodiversity (eds EA Norse, LB Crowder), pp. 123-148. Washington, DC: Island Press.
    • (2005) Marine Conservation Biology: The Science of Maintaining the Sea's Biodiversity , pp. 123-148
    • Carlton, J.T.1    Ruiz, G.M.2
  • 3
    • 74549217801 scopus 로고    scopus 로고
    • Alien species in fresh waters: Ecological effects, interactions with other stressors, and prospects for the future
    • doi:10.1111/j.1365-2427.2009.02380.x
    • Strayer DLL. 2010 Alien species in fresh waters: ecological effects, interactions with other stressors, and prospects for the future. Freshw. Biol. 55, 152-174. (doi:10.1111/j.1365-2427.2009.02380.x)
    • (2010) Freshw. Biol. , vol.55 , pp. 152-174
    • Strayer, D.L.L.1
  • 4
    • 33947491277 scopus 로고    scopus 로고
    • Are modern biological invasions an unprecedented form of global change
    • doi:10.1111/j.1523-1739.2006.00615.x
    • Ricciardi A. 2007 Are modern biological invasions an unprecedented form of global change. Conserv. Biol. 21, 329-336. (doi:10.1111/j.1523-1739.2006. 00615.x)
    • (2007) Conserv. Biol. , vol.21 , pp. 329-336
    • Ricciardi, A.1
  • 5
    • 72549102939 scopus 로고    scopus 로고
    • Advances in ecological and economical analysis of invasive species: Dreisssenid mussels as a case study
    • (eds RP Keller, DM Lodge, JF Shogren, MA Lewis), New York, NY: Oxford University Press
    • Bossenbroek J, Finnoff D, Shogren JF. 2009 Advances in ecological and economical analysis of invasive species: dreisssenid mussels as a case study. In Bioeconomics of invasive species: integrating ecology, economics, and management (eds RP Keller, DM Lodge, JF Shogren, MA Lewis), pp. 244-265. New York, NY: Oxford University Press.
    • (2009) Bioeconomics of Invasive Species: Integrating Ecology, Economics, and Management , pp. 244-265
    • Bossenbroek, J.1    Finnoff, D.2    Shogren, J.F.3
  • 6
    • 68949085326 scopus 로고    scopus 로고
    • Invasive species, ecosystem services and human well-being
    • doi:10.1016/j.tree.2009.03.016
    • Pejchar L, Mooney HA. 2009 Invasive species, ecosystem services and human well-being. Trends Ecol. Evol. 24, 497-504. (doi:10.1016/j.tree.2009.03.016)
    • (2009) Trends Ecol. Evol. , vol.24 , pp. 497-504
    • Pejchar, L.1    Mooney, H.A.2
  • 7
    • 80053275663 scopus 로고    scopus 로고
    • From molecules to management: Adopting DNA-based methods for monitoring biological invasions in aquatic environments
    • doi:10.1016/j.envres.2011.02.001
    • Darling JA, Mahon AR. 2011 From molecules to management: adopting DNA-based methods for monitoring biological invasions in aquatic environments. Environ. Res. 111, 978-988. (doi:10.1016/j.envres.2011.02.001)
    • (2011) Environ. Res. , vol.111 , pp. 978-988
    • Darling, J.A.1    Mahon, A.R.2
  • 8
    • 14644414830 scopus 로고    scopus 로고
    • Update on the environmental and economic costs associated with alien-invasive species in the United States
    • doi:10.1016/j.ecolecon.2004.10.002
    • Pimentel D, Zuniga R, Morrison D. 2005 Update on the environmental and economic costs associated with alien-invasive species in the United States. Ecol. Econ. 52, 273-288. (doi:10.1016/j.ecolecon.2004.10.002)
    • (2005) Ecol. Econ. , vol.52 , pp. 273-288
    • Pimentel, D.1    Zuniga, R.2    Morrison, D.3
  • 9
    • 0037038989 scopus 로고    scopus 로고
    • An ounce of prevention or a pound of cure: Bioeconomic risk analysis of invasive species
    • doi:10.1098/rspb.2002.2179
    • Leung B, Lodge DM, Finnoff D, Shogren JF, Lewis MA, Lamberti G. 2002 An ounce of prevention or a pound of cure: bioeconomic risk analysis of invasive species. Proc. R. Soc. Lond. B 269, 2407-2413. (doi:10.1098/rspb.2002.2179)
    • (2002) Proc. R. Soc. Lond. B , vol.269 , pp. 2407-2413
    • Leung, B.1    Lodge, D.M.2    Finnoff, D.3    Shogren, J.F.4    Lewis, M.A.5    Lamberti, G.6
  • 10
    • 0027331894 scopus 로고
    • Colonization, ecology, and population-structure of the Quagga mussel (Bivalvia, Dreissenidae) in the Lower Great-Lakes
    • doi:10.1139/f93-255
    • Mills EL, Dermott RM, Roseman E, Dustin D, Mellina E, Conn DB, Spidle A. 1993 Colonization, ecology, and population-structure of the Quagga mussel (Bivalvia, Dreissenidae) in the Lower Great-Lakes. Can. J. Fish. Aquat. Sci. 50, 2305-2314. (doi:10.1139/f93-255)
    • (1993) Can. J. Fish. Aquat. Sci. , vol.50 , pp. 2305-2314
    • Mills, E.L.1    Dermott, R.M.2    Roseman, E.3    Dustin, D.4    Mellina, E.5    Conn, D.B.6    Spidle, A.7
  • 11
    • 33745699240 scopus 로고    scopus 로고
    • Patterns of invasion in the Laurentian Great Lakes in relation to changes in vector activity
    • doi:10.1111/j.1366-9516.2006.00262.x
    • Ricciardi A. 2006 Patterns of invasion in the Laurentian Great Lakes in relation to changes in vector activity. Divers. Distrib. 12, 425-433. (doi:10.1111/j.1366-9516.2006.00262.x)
    • (2006) Divers. Distrib. , vol.12 , pp. 425-433
    • Ricciardi, A.1
  • 12
    • 0002307144 scopus 로고    scopus 로고
    • Economic impact of zebra mussels: Results of the 1995 national zebra mussel information clearinghouse study
    • O'Neill Jr C. 1997 Economic impact of zebra mussels: results of the 1995 national zebra mussel information clearinghouse study. Great Lakes Res. Rev. 3, 35-42.
    • (1997) Great Lakes Res. Rev. , vol.3 , pp. 35-42
    • O'Neill Jr., C.1
  • 13
    • 27744519822 scopus 로고    scopus 로고
    • California's reaction to Caulerpa taxifolia: A model for invasive species rapid response
    • doi:10.1007/s10530-004-3123-z
    • Anderson LWJ. 2005 California's reaction to Caulerpa taxifolia: a model for invasive species rapid response. Biol. Invasions 7, 1003-1016. (doi:10.1007/s10530-004-3123-z)
    • (2005) Biol. Invasions , vol.7 , pp. 1003-1016
    • Anderson, L.W.J.1
  • 14
    • 70349112305 scopus 로고    scopus 로고
    • Eradication of colonizing populations of zebra mussels (Dreissena polymorpha) by early detection and SCUBA removal: Lake George, NY
    • doi:10.1002/aqc.1052
    • Wimbush J, Frischer M, Zarzynski J. 2009 Eradication of colonizing populations of zebra mussels (Dreissena polymorpha) by early detection and SCUBA removal: Lake George, NY. Aquatic Conserv. Mar. Freshw. Ecosyst. 19, 703-713. (doi:10.1002/aqc.1052)
    • (2009) Aquatic Conserv. Mar. Freshw. Ecosyst. , vol.19 , pp. 703-713
    • Wimbush, J.1    Frischer, M.2    Zarzynski, J.3
  • 15
    • 34548681208 scopus 로고    scopus 로고
    • DNA-based methods for monitoring invasive species: A review and prospectus
    • doi:10.1007/s10530-006-9079-4
    • Darling JA, Blum MJ. 2007 DNA-based methods for monitoring invasive species: a review and prospectus. Biol. Invasions 9, 751-765. (doi:10.1007/s10530-006-9079-4)
    • (2007) Biol. Invasions , vol.9 , pp. 751-765
    • Darling, J.A.1    Blum, M.J.2
  • 16
    • 79951983346 scopus 로고    scopus 로고
    • 'Sight-unseen' detection of rare aquatic species using environmental DNA
    • doi:10.1111/j.1755-263X.2010.00158.x
    • Jerde CL, Mahon AR, Chadderton WL, Lodge DM. 2011 'Sight-unseen' detection of rare aquatic species using environmental DNA. Conserv. Lett. 4, 150-157. (doi:10.1111/j.1755-263X.2010.00158.x)
    • (2011) Conserv. Lett. , vol.4 , pp. 150-157
    • Jerde, C.L.1    Mahon, A.R.2    Chadderton, W.L.3    Lodge, D.M.4
  • 17
    • 20644463204 scopus 로고    scopus 로고
    • Food and forensic molecular identification: Update and challenges
    • doi:10.1016/j.tibtech.2005.05.006
    • Teletchea F, Maudet C, Hänni C. 2005 Food and forensic molecular identification: update and challenges. Trends Biotechnol. 23, 359-366. (doi:10.1016/j.tibtech.2005.05.006)
    • (2005) Trends Biotechnol. , vol.23 , pp. 359-366
    • Teletchea, F.1    Maudet, C.2    Hänni, C.3
  • 18
    • 84864319256 scopus 로고    scopus 로고
    • Surveillance of fish species composition using environmental DNA
    • doi:10.1007/s10201-011-0362-4
    • Minamoto T, Yamanaka H, Takahara T, Honjo MN, Kawabata Z. 2011 Surveillance of fish species composition using environmental DNA. Limnology 13, 193-197. (doi:10.1007/s10201-011-0362-4)
    • (2011) Limnology , vol.13 , pp. 193-197
    • Minamoto, T.1    Yamanaka, H.2    Takahara, T.3    Honjo, M.N.4    Kawabata, Z.5
  • 19
    • 79960795565 scopus 로고    scopus 로고
    • Molecular detection of vertebrates in stream water: A demonstration using rocky mountain tailed frogs and Idaho giant salamanders
    • doi:10.1371/journal.pone.0022746.t002
    • Goldberg CS, Pilliod DS, Arkle RS, Waits LP. 2011 Molecular detection of vertebrates in stream water: a demonstration using rocky mountain tailed frogs and Idaho giant salamanders. PLoS ONE 6, e22746. (doi:10.1371/journal.pone. 0022746.t002)
    • (2011) PLoS ONE , vol.6
    • Goldberg, C.S.1    Pilliod, D.S.2    Arkle, R.S.3    Waits, L.P.4
  • 21
    • 84861537650 scopus 로고    scopus 로고
    • Perspective: Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA
    • doi:10.1111/j.1365-294X.2012.05600.x
    • Lodge DM, Turner CR, Jerde CL, Barnes MA, Chadderton WL, Egan SP, Feder JL, Mahon AR, Pfrender ME. 2012 Perspective: conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA. Mol. Ecol. 23, 2555-2558. (doi:10.1111/j.1365-294X.2012.05600.x)
    • (2012) Mol. Ecol. , vol.23 , pp. 2555-2558
    • Lodge, D.M.1    Turner, C.R.2    Jerde, C.L.3    Barnes, M.A.4    Chadderton, W.L.5    Egan, S.P.6    Feder, J.L.7    Mahon, A.R.8    Pfrender, M.E.9
  • 23
    • 79951989643 scopus 로고    scopus 로고
    • Molecular detection of invasive species in heterogeneous mixtures using a microfluidic carbon nanotube platform
    • doi:10.1371/journal.pone.0017280.t002
    • Mahon AR, Barnes MA, Senapati S, Feder JL, Darling JA, Chang H-C, Lodge DM. 2011 Molecular detection of invasive species in heterogeneous mixtures using a microfluidic carbon nanotube platform. PLoS ONE 6, e17280. (doi:10.1371/journal.pone.0017280.t002)
    • (2011) PLoS ONE , vol.6
    • Mahon, A.R.1    Barnes, M.A.2    Senapati, S.3    Feder, J.L.4    Darling, J.A.5    Chang, H.-C.6    Lodge, D.M.7
  • 24
    • 68649092365 scopus 로고    scopus 로고
    • Shear and AC field enhanced carbon nanotube impedance assay for rapid, sensitive, and mismatch-discriminating DNA hybridization
    • doi:10.1021/nn9004632
    • Basuray S, Senapati S, Aijian A, Mahon AR, Chang H-C. 2009 Shear and AC field enhanced carbon nanotube impedance assay for rapid, sensitive, and mismatch-discriminating DNA hybridization. ACS Nano 3, 1823-1830. (doi:10.1021/nn9004632)
    • (2009) ACS Nano , vol.3 , pp. 1823-1830
    • Basuray, S.1    Senapati, S.2    Aijian, A.3    Mahon, A.R.4    Chang, H.-C.5
  • 25
    • 78650440897 scopus 로고    scopus 로고
    • High-precision sizing of nanoparticles by laser transmission spectroscopy
    • doi:10.1364/AO.49.006602
    • Li F, Schafer R, Hwang C-T, Tanner CE, Ruggiero ST. 2010 High-precision sizing of nanoparticles by laser transmission spectroscopy. Appl. Optics 49, 6602-6611. (doi:10.1364/AO.49.006602)
    • (2010) Appl. Optics , vol.49 , pp. 6602-6611
    • Li, F.1    Schafer, R.2    Hwang, C.-T.3    Tanner, C.E.4    Ruggiero, S.T.5
  • 27
    • 0035106406 scopus 로고    scopus 로고
    • Accurate length determination of DNA molecules visualized by atomic force microscopy: Evidence for a partial B- To A-form transition on mica
    • doi:10.1016/S0304-3991(00)00064-4
    • Rivetti C, Codeluppi S. 2001 Accurate length determination of DNA molecules visualized by atomic force microscopy: evidence for a partial B- to A-form transition on mica. Ultramicroscopy 87, 55-66. (doi:10.1016/S0304- 3991(00)00064-4)
    • (2001) Ultramicroscopy , vol.87 , pp. 55-66
    • Rivetti, C.1    Codeluppi, S.2
  • 29
    • 0028528103 scopus 로고
    • DNA primers for amplification of mitochondrial cytochrome c oxidase subunit i from diverse metazoan invertebrates
    • Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek RC. 1994 DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3, 294-299.
    • (1994) Mol. Mar. Biol. Biotechnol. , vol.3 , pp. 294-299
    • Folmer, O.1    Black, M.2    Hoeh, W.3    Lutz, R.4    Vrijenhoek, R.C.5
  • 30
    • 24344494328 scopus 로고    scopus 로고
    • Post-exchange zooplankton in ballast water of ships entering the San Francisco Estuary
    • doi:10.1093/plankt/fbi044
    • Choi KH, Kimmerer W, Smith G, Ruiz GM, Lion K. 2005 Post-exchange zooplankton in ballast water of ships entering the San Francisco Estuary. J. Plankton Res. 27, 707-714. (doi:10.1093/plankt/fbi044)
    • (2005) J. Plankton Res. , vol.27 , pp. 707-714
    • Choi, K.H.1    Kimmerer, W.2    Smith, G.3    Ruiz, G.M.4    Lion, K.5
  • 31
    • 68349098411 scopus 로고    scopus 로고
    • Molecular identification methods of fish species: Reassessment and possible applications
    • doi:10.1007/s11160-009-9107-4
    • Teletchea F. 2009 Molecular identification methods of fish species: reassessment and possible applications. Rev. Fish Biol. Fisheries 19, 265-293. (doi:10.1007/s11160-009-9107-4)
    • (2009) Rev. Fish Biol. Fisheries , vol.19 , pp. 265-293
    • Teletchea, F.1
  • 32
    • 31144456439 scopus 로고    scopus 로고
    • Invertebrates associated with residual ballast water and sediments of cargo-carrying ships entering the Great Lakes
    • doi:10.1139/F05-160
    • Duggan I, van Overdijk C, Bailey S, Jenkins P, Limen H, MacIsaac HJ. 2005 Invertebrates associated with residual ballast water and sediments of cargo-carrying ships entering the Great Lakes. Can. J. Fish. Aquat. Sci. 62, 2463-2474. (doi:10.1139/F05-160)
    • (2005) Can. J. Fish. Aquat. Sci. , vol.62 , pp. 2463-2474
    • Duggan, I.1    Van Overdijk, C.2    Bailey, S.3    Jenkins, P.4    Limen, H.5    MacIsaac, H.J.6
  • 33
    • 1642386713 scopus 로고    scopus 로고
    • Global hot spots of biological invasions: Evaluating options for ballast-water management
    • doi:10.1098/rspb.2003.2629
    • Drake JM, Lodge DM. 2004 Global hot spots of biological invasions: evaluating options for ballast-water management. Proc. R. Soc. Lond. B 271, 575-580. (doi:10.1098/rspb.2003.2629)
    • (2004) Proc. R. Soc. Lond. B , vol.271 , pp. 575-580
    • Drake, J.M.1    Lodge, D.M.2
  • 34
    • 40849146404 scopus 로고    scopus 로고
    • Hull fouling is a risk factor for intercontinental species exchange in aquatic ecosystems
    • Drake J, Lodge D. 2007 Hull fouling is a risk factor for intercontinental species exchange in aquatic ecosystems. AI 2, 121-131.
    • (2007) AI , vol.2 , pp. 121-131
    • Drake, J.1    Lodge, D.2
  • 35
    • 34347264117 scopus 로고    scopus 로고
    • Rate of species introductions in the Great Lakes via ships' ballast water and sediments
    • doi:10.1139/f07-029
    • Drake JM, Lodge DM. 2007 Rate of species introductions in the Great Lakes via ships' ballast water and sediments. Can. J. Fish. Aquat. Sci. 64, 530-538. (doi:10.1139/f07-029)
    • (2007) Can. J. Fish. Aquat. Sci. , vol.64 , pp. 530-538
    • Drake, J.M.1    Lodge, D.M.2
  • 36
    • 84858863229 scopus 로고    scopus 로고
    • US Environmental Protection Agency. EPA Science Advisory Board Technical Report no. EPA-SAB-11-009. Washington, DC: EPA
    • US Environmental Protection Agency. 2011 Efficacy of ballast water treatment systems. EPA Science Advisory Board Technical Report no. EPA-SAB-11-009. Washington, DC: EPA.
    • (2011) Efficacy of Ballast Water Treatment Systems


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.