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Volumn 7, Issue 12, 2012, Pages

Evaluation of a Direct Reverse Transcription Loop-Mediated Isothermal Amplification Method without RNA Extraction for the Detection of Human Enterovirus 71 Subgenotype C4 in Nasopharyngeal Swab Specimens

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHILD; CHINA; CONTROLLED STUDY; COXSACKIE VIRUS A; COXSACKIE VIRUS A10; COXSACKIE VIRUS A14; COXSACKIE VIRUS A16; COXSACKIE VIRUS A2; COXSACKIE VIRUS A24; COXSACKIE VIRUS A4; COXSACKIE VIRUS A5; COXSACKIE VIRUS A7; COXSACKIE VIRUS A9; COXSACKIE VIRUS B; COXSACKIE VIRUS B1; COXSACKIE VIRUS B2; COXSACKIE VIRUS B3; COXSACKIE VIRUS B4; COXSACKIE VIRUS B5; CROSS REACTION; DIAGNOSTIC TEST ACCURACY STUDY; DIRECT REVERSE TRANSCRIPTION LOOP MEDIATED ISOTHERMAL AMPLIFICATION; ECHO VIRUS; ECHO VIRUS 11; ECHO VIRUS 19; ECHO VIRUS 3; ENTEROVIRUS 71; ENTEROVIRUS 71 INFECTION; ENTEROVIRUS INFECTION; GENOTYPE; HUMAN; INFANT; INTERMETHOD COMPARISON; LIMIT OF DETECTION; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGICAL PARAMETERS; NASOPHARYNGEAL SWAB; NONHUMAN; NUCLEOTIDE SEQUENCE; POINT OF CARE TESTING; QUANTITATIVE DIAGNOSIS; REVERSE TRANSCRIPTION LOOP MEDIATED ISOTHERMAL AMPLIFICATION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA EXTRACTION; SENSITIVITY AND SPECIFICITY; TISSUE CULTURE INFECTIVE DOSE; VIRUS DETECTION;

EID: 84871263284     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0052486     Document Type: Article
Times cited : (42)

References (27)
  • 1
    • 44149119062 scopus 로고    scopus 로고
    • Rapid detection of enterovirus 71 by real-time TaqMan RT-PCR
    • Tan EL, Yong LL, Quak SH, Yeo WC, Chow VT, et al. (2008) Rapid detection of enterovirus 71 by real-time TaqMan RT-PCR. J Clin Virol 42: 203-206.
    • (2008) J Clin Virol , vol.42 , pp. 203-206
    • Tan, E.L.1    Yong, L.L.2    Quak, S.H.3    Yeo, W.C.4    Chow, V.T.5
  • 2
    • 58149390189 scopus 로고    scopus 로고
    • Detection and quantification of enterovirus 71 genome from cerebrospinal fluid of an encephalitis patient by PCR applications
    • Fujimoto T, Yoshida S, Munemura T, Taniguchi K, Shinohara M, et al. (2008) Detection and quantification of enterovirus 71 genome from cerebrospinal fluid of an encephalitis patient by PCR applications. Jpn J Infect Dis 61: 497-499.
    • (2008) Jpn J Infect Dis , vol.61 , pp. 497-499
    • Fujimoto, T.1    Yoshida, S.2    Munemura, T.3    Taniguchi, K.4    Shinohara, M.5
  • 3
    • 58149289698 scopus 로고    scopus 로고
    • Simultaneous detection of human enterovirus 71 and coxsackievirus A16 in clinical specimens by multiplex real-time PCR with an internal amplification control
    • Xiao XL, He YQ, Yu YG, Yang H, Chen G, et al. (2009) Simultaneous detection of human enterovirus 71 and coxsackievirus A16 in clinical specimens by multiplex real-time PCR with an internal amplification control. Arch Virol 154: 121-125.
    • (2009) Arch Virol , vol.154 , pp. 121-125
    • Xiao, X.L.1    He, Y.Q.2    Yu, Y.G.3    Yang, H.4    Chen, G.5
  • 5
    • 77953027749 scopus 로고    scopus 로고
    • Optimisation of reverse transcriptase loop-mediated isothermal amplification assay for rapid detection of Macrobrachium rosenbergii noda virus and extra small virus in Macrobrachium rosenbergii
    • Haridas DV, Pillai D, Manojkumar B, Nair CM, Sherief PM, (2010) Optimisation of reverse transcriptase loop-mediated isothermal amplification assay for rapid detection of Macrobrachium rosenbergii noda virus and extra small virus in Macrobrachium rosenbergii. J Virol Methods 167: 61-67.
    • (2010) J Virol Methods , vol.167 , pp. 61-67
    • Haridas, D.V.1    Pillai, D.2    Manojkumar, B.3    Nair, C.M.4    Sherief, P.M.5
  • 6
    • 77956187814 scopus 로고    scopus 로고
    • Rapid detection of squash leaf curl virus by loop-mediated isothermal amplification
    • Kuan CP, Wu MT, Lu YL, Huang HC, (2010) Rapid detection of squash leaf curl virus by loop-mediated isothermal amplification. J Virol Methods 169: 61-65.
    • (2010) J Virol Methods , vol.169 , pp. 61-65
    • Kuan, C.P.1    Wu, M.T.2    Lu, Y.L.3    Huang, H.C.4
  • 7
    • 80053473354 scopus 로고    scopus 로고
    • Visual detection of high-risk human papillomavirus genotypes 16, 18, 45, 52, and 58 by loop-mediated isothermal amplification with hydroxynaphthol blue dye
    • Luo L, Nie K, Yang MJ, Wang M, Li J, et al. (2011) Visual detection of high-risk human papillomavirus genotypes 16, 18, 45, 52, and 58 by loop-mediated isothermal amplification with hydroxynaphthol blue dye. J Clin Microbiol 49: 3545-3550.
    • (2011) J Clin Microbiol , vol.49 , pp. 3545-3550
    • Luo, L.1    Nie, K.2    Yang, M.J.3    Wang, M.4    Li, J.5
  • 8
    • 77953537088 scopus 로고    scopus 로고
    • Visual detection of pandemic influenza A H1N1 Virus 2009 by reverse-transcription loop-mediated isothermal amplification with hydroxynaphthol blue dye
    • Ma XJ, Shu YL, Nie K, Qin M, Wang DY, et al. (2010) Visual detection of pandemic influenza A H1N1 Virus 2009 by reverse-transcription loop-mediated isothermal amplification with hydroxynaphthol blue dye. J Virol Methods 167: 214-217.
    • (2010) J Virol Methods , vol.167 , pp. 214-217
    • Ma, X.J.1    Shu, Y.L.2    Nie, K.3    Qin, M.4    Wang, D.Y.5
  • 9
    • 20444506796 scopus 로고    scopus 로고
    • Rapid detection and differentiation of dengue virus serotypes by a real-time reverse transcription-loop-mediated isothermal amplification assay
    • Parida M, Horioke K, Ishida H, Dash PK, Saxena P, et al. (2005) Rapid detection and differentiation of dengue virus serotypes by a real-time reverse transcription-loop-mediated isothermal amplification assay. J Clin Microbiol 43: 2895-2903.
    • (2005) J Clin Microbiol , vol.43 , pp. 2895-2903
    • Parida, M.1    Horioke, K.2    Ishida, H.3    Dash, P.K.4    Saxena, P.5
  • 10
    • 77955094744 scopus 로고    scopus 로고
    • A method for simultaneous detection and identification of Brazilian dog- and vampire bat-related rabies virus by reverse transcription loop-mediated isothermal amplification assay
    • Saitou Y, Kobayashi Y, Hirano S, Mochizuki N, Itou T, et al. (2010) A method for simultaneous detection and identification of Brazilian dog- and vampire bat-related rabies virus by reverse transcription loop-mediated isothermal amplification assay. J Virol Methods 168: 13-17.
    • (2010) J Virol Methods , vol.168 , pp. 13-17
    • Saitou, Y.1    Kobayashi, Y.2    Hirano, S.3    Mochizuki, N.4    Itou, T.5
  • 11
    • 79959341889 scopus 로고    scopus 로고
    • Visual detection of human enterovirus 71 subgenotype C4 and Coxsackievirus A16 by reverse transcription loop-mediated isothermal amplification with the hydroxynaphthol blue dye
    • Nie K, Zhang Y, Luo L, Yang MJ, Hu XM, et al. (2011) Visual detection of human enterovirus 71 subgenotype C4 and Coxsackievirus A16 by reverse transcription loop-mediated isothermal amplification with the hydroxynaphthol blue dye. J Virol Methods 175: 283-286.
    • (2011) J Virol Methods , vol.175 , pp. 283-286
    • Nie, K.1    Zhang, Y.2    Luo, L.3    Yang, M.J.4    Hu, X.M.5
  • 12
    • 79952322755 scopus 로고    scopus 로고
    • Development and evaluation of a reverse transcription-loop-mediated isothermal amplification assay for rapid detection of enterovirus 71
    • Jiang T, Liu J, Deng YQ, Xu LJ, Li XF, et al. (2011) Development and evaluation of a reverse transcription-loop-mediated isothermal amplification assay for rapid detection of enterovirus 71. J Clin Microbiol 49: 870-874.
    • (2011) J Clin Microbiol , vol.49 , pp. 870-874
    • Jiang, T.1    Liu, J.2    Deng, Y.Q.3    Xu, L.J.4    Li, X.F.5
  • 13
    • 79960560201 scopus 로고    scopus 로고
    • Development and evaluation of reverse transcription-loop-mediated isothermal amplification assay for rapid detection of enterovirus 71
    • Shi W, Li K, Ji Y, Jiang Q, Shi M, et al. (2011) Development and evaluation of reverse transcription-loop-mediated isothermal amplification assay for rapid detection of enterovirus 71. BMC Infect Dis 11: 197.
    • (2011) BMC Infect Dis , vol.11 , pp. 197
    • Shi, W.1    Li, K.2    Ji, Y.3    Jiang, Q.4    Shi, M.5
  • 14
    • 80053920148 scopus 로고    scopus 로고
    • Simple and rapid detection of human enterovirus 71 by reverse-transcription and loop-mediated isothermal amplification: cryopreservation affected the detection ability
    • Xia JF, Yan XF, Yu H, Qu D, Long JE, (2011) Simple and rapid detection of human enterovirus 71 by reverse-transcription and loop-mediated isothermal amplification: cryopreservation affected the detection ability. Diagn Microbiol Infect Dis 71: 244-251.
    • (2011) Diagn Microbiol Infect Dis , vol.71 , pp. 244-251
    • Xia, J.F.1    Yan, X.F.2    Yu, H.3    Qu, D.4    Long, J.E.5
  • 15
    • 34248595508 scopus 로고    scopus 로고
    • Development of a loop-mediated isothermal amplification assay for rapid detection of BK virus
    • Bista BR, Ishwad C, Wadowsky RM, Manna P, Randhawa PS, et al. (2007) Development of a loop-mediated isothermal amplification assay for rapid detection of BK virus. J Clin Microbiol 45: 1581-1587.
    • (2007) J Clin Microbiol , vol.45 , pp. 1581-1587
    • Bista, B.R.1    Ishwad, C.2    Wadowsky, R.M.3    Manna, P.4    Randhawa, P.S.5
  • 16
    • 31844450172 scopus 로고    scopus 로고
    • Sensitive and inexpensive molecular test for falciparum malaria: detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification
    • Poon LL, Wong BW, Ma EH, Chan KH, Chow LM, et al. (2006) Sensitive and inexpensive molecular test for falciparum malaria: detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification. Clin Chem 52: 303-306.
    • (2006) Clin Chem , vol.52 , pp. 303-306
    • Poon, L.L.1    Wong, B.W.2    Ma, E.H.3    Chan, K.H.4    Chow, L.M.5
  • 17
    • 70450284495 scopus 로고    scopus 로고
    • Isothermal single nucleotide polymorphism genotyping and direct PCR from whole blood using a novel whole-blood lysis buffer
    • Victor ST, Lezhava A, Ishidao T, Endo R, Mitani Y, et al. (2009) Isothermal single nucleotide polymorphism genotyping and direct PCR from whole blood using a novel whole-blood lysis buffer. Mol Diagn Ther 13: 383-387.
    • (2009) Mol Diagn Ther , vol.13 , pp. 383-387
    • Victor, S.T.1    Lezhava, A.2    Ishidao, T.3    Endo, R.4    Mitani, Y.5
  • 18
    • 0141650507 scopus 로고    scopus 로고
    • Direct-test PCR for detection of meningococcal DNA and its serogroup characterization: standardization and adaptation for use in a public health laboratory
    • Baethgen LF, Moraes C, Weidlich L, Rios S, Kmetzsch CI, et al. (2003) Direct-test PCR for detection of meningococcal DNA and its serogroup characterization: standardization and adaptation for use in a public health laboratory. J Med Microbiol 52: 793-799.
    • (2003) J Med Microbiol , vol.52 , pp. 793-799
    • Baethgen, L.F.1    Moraes, C.2    Weidlich, L.3    Rios, S.4    Kmetzsch, C.I.5
  • 19
    • 79958034909 scopus 로고    scopus 로고
    • Evaluation of a quantitative real-time PCR assay for the detection of JC polyomavirus DNA in cerebrospinal fluid without nucleic acid extraction
    • Nakamichi K, Kurane I, Saijo M, (2011) Evaluation of a quantitative real-time PCR assay for the detection of JC polyomavirus DNA in cerebrospinal fluid without nucleic acid extraction. Jpn J Infect Dis 64: 211-216.
    • (2011) Jpn J Infect Dis , vol.64 , pp. 211-216
    • Nakamichi, K.1    Kurane, I.2    Saijo, M.3
  • 20
    • 73049087777 scopus 로고    scopus 로고
    • Detection of noroviruses in fecal specimens by direct RT-PCR without RNA purification
    • Nishimura N, Nakayama H, Yoshizumi S, Miyoshi M, Tonoike H, et al. (2010) Detection of noroviruses in fecal specimens by direct RT-PCR without RNA purification. J Virol Methods 163: 282-286.
    • (2010) J Virol Methods , vol.163 , pp. 282-286
    • Nishimura, N.1    Nakayama, H.2    Yoshizumi, S.3    Miyoshi, M.4    Tonoike, H.5
  • 23
    • 80053641431 scopus 로고    scopus 로고
    • Direct detection of equine herpesvirus type 1 DNA in nasal swabs by loop-mediated isothermal amplification (LAMP)
    • Nemoto M, Ohta M, Tsujimura K, Bannai H, Yamanaka T, et al. (2011) Direct detection of equine herpesvirus type 1 DNA in nasal swabs by loop-mediated isothermal amplification (LAMP). J Vet Med Sci 73: 1225-1227.
    • (2011) J Vet Med Sci , vol.73 , pp. 1225-1227
    • Nemoto, M.1    Ohta, M.2    Tsujimura, K.3    Bannai, H.4    Yamanaka, T.5
  • 24
    • 20844460273 scopus 로고    scopus 로고
    • Rapid diagnosis of herpes simplex virus infection by a loop-mediated isothermal amplification method
    • Enomoto Y, Yoshikawa T, Ihira M, Akimoto S, Miyake F, et al. (2005) Rapid diagnosis of herpes simplex virus infection by a loop-mediated isothermal amplification method. J Clin Microbiol 43: 951-955.
    • (2005) J Clin Microbiol , vol.43 , pp. 951-955
    • Enomoto, Y.1    Yoshikawa, T.2    Ihira, M.3    Akimoto, S.4    Miyake, F.5
  • 25
    • 34147108243 scopus 로고    scopus 로고
    • Direct detection of human herpesvirus 6 DNA in serum by the loop-mediated isothermal amplification method
    • Ihira M, Akimoto S, Miyake F, Fujita A, Sugata K, et al. (2007) Direct detection of human herpesvirus 6 DNA in serum by the loop-mediated isothermal amplification method. J Clin Virol 39: 22-26.
    • (2007) J Clin Virol , vol.39 , pp. 22-26
    • Ihira, M.1    Akimoto, S.2    Miyake, F.3    Fujita, A.4    Sugata, K.5
  • 26
    • 77953027214 scopus 로고    scopus 로고
    • Direct detection of human herpesvirus 6 DNA in serum by variant specific loop-mediated isothermal amplification in hematopoietic stem cell transplant recipients
    • Ihira M, Sugiyama H, Enomoto Y, Higashimoto Y, Sugata K, et al. (2010) Direct detection of human herpesvirus 6 DNA in serum by variant specific loop-mediated isothermal amplification in hematopoietic stem cell transplant recipients. J Virol Methods 167: 103-106.
    • (2010) J Virol Methods , vol.167 , pp. 103-106
    • Ihira, M.1    Sugiyama, H.2    Enomoto, Y.3    Higashimoto, Y.4    Sugata, K.5


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