Direct detection of human herpesvirus 6 DNA in serum by variant specific loop-mediated isothermal amplification in hematopoietic stem cell transplant recipients

Journal of Virological Methods

Volumn 167, Issue 1, 2010, Pages 103-106

  Ihira, Masaru ^a   Sugiyama, Hiroko ^b   Enomoto, Yoshihiko ^b   Higashimoto, Yuki ^b   Sugata, Ken ^b   Asano, Yoshizo ^b   Yoshikawa, Tetsushi ^b  

^a FUJITA HEALTH UNIVERSITY   (Japan)

^b FUJITA HEALTH UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

Direct LAMP; HHV 6; HSCT; Variant specific

Indexed keywords

VIRUS DNA;

ARTICLE; BLOOD SAMPLING; CLINICAL ARTICLE; CONTROLLED STUDY; FEMALE; GRAFT RECIPIENT; HEMATOPOIETIC STEM CELL TRANSPLANTATION; HERPES VIRUS INFECTION; HUMAN; HUMAN HERPESVIRUS 6; LOOP MEDIATED ISOTHERMAL AMPLIFICATION; MALE; NUCLEOTIDE SEQUENCE; PATIENT MONITORING; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; RELIABILITY; SENSITIVITY AND SPECIFICITY; VALIDATION PROCESS; VIRUS DETECTION; VIRUS GENE;

DNA PRIMERS; DNA, VIRAL; FEMALE; HEMATOPOIETIC STEM CELL TRANSPLANTATION; HERPESVIRUS 6, HUMAN; HUMANS; IMMEDIATE-EARLY PROTEINS; MALE; NUCLEIC ACID AMPLIFICATION TECHNIQUES; ROSEOLOVIRUS INFECTIONS; SENSITIVITY AND SPECIFICITY; SERUM; TRANSPLANTATION; VIROLOGY;

HUMAN HERPESVIRUS 6;

EID: 77953027214     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2010.01.025     Document Type: Article

References (21)

1. Ablashi D.V., Balachandran N., Josephs S.F., Hung C.L., Krueger G.R., Kramarsky B., Salahuddin S.Z., Gallo R.C. Genomic polymorphism, growth properties, and immunologic variations in human herpesvirus-6 isolates. Virology 1991, 184:545-552.
2. Aubin J.T., Collandre H., Candotti D., Ingrand D., Rouzioux C., Burgard M., Richard S., Huraux J.M., Agut H. Several groups among human herpesvirus 6 strains can be distinguished by Southern blotting and polymerase chain reaction. J. Clin. Microbiol. 1991, 29:367-372.
3. Aubin J.T., Poirel L., Robert C., Huraux J.M., Agut H. Identification of human herpesvirus 6 variants A and B by amplimer hybridization with variant-specific oligonucleotides and amplification with variant-specific primers. J. Clin. Microbiol. 1994, 32:2434-2440.
4. Bosi A., Zazzi M., Amantini A., Cellerini M., Vannucchi A.M., De Milito A., Guidi S., Saccardi R., Lombardini L., Laszlo D., Rossi Ferrini P. Fatal herpesvirus 6 encephalitis after unrelated bone marrow transplant. Bone Marrow Transplant. 1998, 22:285-288.
5. Boutolleau D., Duros C., Bonnafous P., Caiola D., Karras A., Castro N.D., Ouachee M., Narcy P., Gueudin M., Agut H., Gautheret-Dejean A. Identification of human herpesvirus 6 variants A and B by primer-specific real-time PCR may help to revisit their respective role in pathology. J. Clin. Virol. 2006, 35:257-263.
6. de Labarthe A., Gauthert-Dejean A., Bossi P., Vernant J.P., Dhedin N. HHV-6 variant A meningoencephalitis after allogeneic hematopoietic stem cell transplantation diagnosed by quantitative real-time polymerase chain reaction. Transplantation 2005, 80:539.
7. Drobyski W.R., Eberle M., Majewski D., Baxter-Lowe L.A. Prevalence of human herpesvirus 6 variant A and B infections in bone marrow transplant recipients as determined by polymerase chain reaction and sequence-specific oligonucleotide probe hybridization. J. Clin. Microbiol. 1993, 31:1515-1520.
8. Enomoto Y., Yoshikawa T., Ihira M., Akimoto S., Miyake F., Usui C., Suga S., Suzuki K., Kawana T., Nishiyama Y., Asano Y. Rapid diagnosis of herpes simplex virus infection by a loop-mediated isothermal amplification method. J. Clin. Microbiol. 2005, 43:951-955.
9. Ihira M., Akimoto S., Miyake F., Fujita A., Sugata K., Suga S., Ohashi M., Nishimura N., Ozaki T., Asano Y., Yoshikawa T. Direct detection of human herpesvirus 6 DNA in serum by the loop-mediated isothermal amplification method. J. Clin. Virol. 2007, 39:22-26.
10. Ihira M., Ohta A., Sugata K., Suga S., Asano Y., Yoshikawa T. Loop-mediated isothermal amplification for discriminating between human herpesvirus 6A and B. J. Virol. Methods 2008, 154:223-225.
11. Isegawa Y., Mukai T., Nakano K., Kagawa M., Chen J., Mori Y., Sunagawa T., Kawanishi K., Sashihara J., Hata A., Zou P., Kosuge H., Yamanishi K. Comparison of the complete DNA sequences of human herpesvirus 6 variants A and B. J. Virol. 1999, 73:8053-8063.
12. Iwata S., Shibata Y., Kawada J., Hara S., Nishiyama Y., Morishima T., Ihira M., Yoshikawa T., Asano Y., Kimura H. Rapid detection of Epstein-Barr virus DNA by loop-mediated isothermal amplification method. J. Clin. Virol. 2006, 37:128-133.
13. Kuhara T., Yoshikawa T., Ihira M., Watanabe D., Tamada Y., Katano H., Asano Y., Matsumoto Y. Rapid detection of human herpesvirus 8 DNA using loop-mediated isothermal amplification. J. Virol. Methods 2007, 144:79-85.
14. Mori Y., Kitao M., Tomita N., Notomi T. Real-time turbidimetry of LAMP reaction for quantifying template DNA. J. Biochem. Biophys. Methods 2004, 59:145-157.
15. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., Hase T. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000, 28:E63.
16. Secchiero P., Carrigan D.R., Asano Y., Benedetti L., Crowley R.W., Komaroff A.L., Gallo R.C., Lusso P. Detection of human herpesvirus 6 in plasma of children with primary infection and immunosuppressed patients by polymerase chain reaction. J. Infect. Dis. 1995, 171:273-280.
17. Tanaka N., Kimura H., Hoshino Y., Kato K., Yoshikawa T., Asano Y., Horibe K., Kojima S., Morishima T. Monitoring four herpesviruses in unrelated cord blood transplantation. Bone Marrow Transplant. 2000, 26:1193-1197.
18. Tavakoli N.P., Nattanmai S., Hull R., Fusco H., Dzigua L., Wang H., Dupuis M. Detection and typing of human herpesvirus 6 by molecular methods in specimens from patients diagnosed with encephalitis or meningitis. J. Clin. Microbiol. 2007, 45:3972-3978.
19. Yamanishi K., Okuno T., Shiraki K., Takahashi M., Kondo T., Asano Y., Kurata T. Identification of human herpesvirus-6 as a causal agent for exanthem subitum. Lancet 1988, 1:1065-1067.
20. Yoshikawa T. Human herpesvirus 6 infection in hematopoietic stem cell transplant patients. Br. J. Haematol. 2004, 124:421-432.
21. Yoshikawa T., Ihira M., Akimoto S., Usui C., Miyake F., Suga S., Enomoto Y., Suzuki R., Nishiyama Y., Asano Y. Detection of human herpesvirus 7 DNA by loop-mediated isothermal amplification. J. Clin. Microbiol. 2004, 42:1348-1352.