메뉴 건너뛰기




Volumn 96, Issue 5, 2012, Pages 1275-1282

Transcripts of a heterologous gene encoding mite allergen der f 7 are stabilized by codon optimization in Aspergillus oryzae

Author keywords

1,10 Phenanthroline; Aspergillus oryzae; Codon optimization; Heterologous gene expression; mRNA stability; Nonstop mRNA decay

Indexed keywords

1 ,10-PHENANTHROLINE; ASPERGILLUS ORYZAE; CODON OPTIMIZATION; HETEROLOGOUS GENES; MRNA STABILITY; NONSTOP MRNA DECAY;

EID: 84871069053     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-012-4169-y     Document Type: Article
Times cited : (32)

References (36)
  • 4
    • 36049041612 scopus 로고    scopus 로고
    • RNA quality control in eukaryotes
    • Doma MK, Parker R (2007) RNA quality control in eukaryotes. Cell 131: 660-668
    • (2007) Cell , vol.131 , pp. 660-668
    • Doma, M.K.1    Parker, R.2
  • 5
    • 77955557873 scopus 로고    scopus 로고
    • Expression and export: Recombinant protein production systems for Aspergillus
    • Fleissner A, Dersch P (2010) Expression and export: recombinant protein production systems for Aspergillus. Appl Microbiol Biotechnol 87: 1255-1270
    • (2010) Appl Microbiol Biotechnol , vol.87 , pp. 1255-1270
    • Fleissner, A.1    Dersch, P.2
  • 9
    • 85004562322 scopus 로고
    • Integrative transformation of Aspergillus oryzae with a plasmid containing the Aspergillus nidulans argB gene
    • Gomi K, Iimura Y, Hara S (1987) Integrative transformation of Aspergillus oryzae with a plasmid containing the Aspergillus nidulans argB gene. Agric Biol Chem 51: 2549-2555
    • (1987) Agric Biol Chem , vol.51 , pp. 2549-2555
    • Gomi, K.1    Iimura, Y.2    Hara, S.3
  • 10
    • 0029952011 scopus 로고    scopus 로고
    • Analysis of heterologous protein production in defined recombinant Aspergillus awamori strains
    • Gouka RJ, Punt PJ, Hessing JGM, van den Hondel CAMJJ (1996) Analysis of heterologous protein production in defined recombinant Aspergillus awamori strains. Appl EnvironMicrobiol 62: 1951-1957
    • (1996) Appl EnvironMicrobiol , vol.62 , pp. 1951-1957
    • Gouka, R.J.1    Punt, P.J.2    Hessing, J.G.M.3    Van Den Hondel Camjj4
  • 11
    • 0031054007 scopus 로고    scopus 로고
    • Efficient production of secreted proteins by Aspergillus: Progress, limitations and prospects
    • Gouka RJ, Punt PJ, van den Hondel CAMJJ (1997a) Efficient production of secreted proteins by Aspergillus: progress, limitations and prospects. Appl Microbiol Biotechnol 47: 1-11
    • (1997) Appl Microbiol Biotechnol , vol.47 , pp. 1-11
    • Gouka, R.J.1    Punt, P.J.2    Van Den Hondel Camjj3
  • 12
    • 0030942270 scopus 로고    scopus 로고
    • Glucoamylase gene fusions alleviate limitations for protein production in Aspergillus awamori at the transcriptional and (post)transcriptional levels
    • Gouka RJ, Punt PJ, van den Hondel CAMJJ (1997b) Glucoamylase gene fusions alleviate limitations for protein production in Aspergillus awamori at the transcriptional and (post)transcriptional levels. Appl Environ Microbiol 63: 488-497
    • (1997) Appl Environ Microbiol , vol.63 , pp. 488-497
    • Gouka, R.J.1    Punt, P.J.2    Van Den Hondel Camjj3
  • 13
    • 2942561052 scopus 로고    scopus 로고
    • Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors
    • Grigull J, Mnaimneh S, Pootoolal J, Robinson MD, Hughes TR (2004) Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors. Mol Cell Biol 24: 5534-5547
    • (2004) Mol Cell Biol , vol.24 , pp. 5534-5547
    • Grigull, J.1    Mnaimneh, S.2    Pootoolal, J.3    Robinson, M.D.4    Hughes, T.R.5
  • 14
    • 70149093861 scopus 로고    scopus 로고
    • The exosome regulates circadian gene expression in a posttranscriptional negative feedback loop
    • Guo J, Cheng P, Yuan H, Kiu Y (2009) The exosome regulates circadian gene expression in a posttranscriptional negative feedback loop. Cell 138: 1236-1246
    • (2009) Cell , vol.138 , pp. 1236-1246
    • Guo, J.1    Cheng, P.2    Yuan, H.3    Kiu, Y.4
  • 15
    • 18444393975 scopus 로고    scopus 로고
    • Translation of aberrant mRNAs lacking a termination codon or with a shortened 3'-UTR is repressed after initiation in yeast
    • Inada T, Aiba H (2005) Translation of aberrant mRNAs lacking a termination codon or with a shortened 3'-UTR is repressed after initiation in yeast. EMBO J 24: 1584-1595
    • (2005) EMBO J , vol.24 , pp. 1584-1595
    • Inada, T.1    Aiba, H.2
  • 16
    • 34547623918 scopus 로고    scopus 로고
    • Quality control of eukaryotic mRNA: Safeguarding cells from abnormal mRNA function
    • Isken O, Maquat LE (2007) Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function. Genes Dev 21: 1833-1856
    • (2007) Genes Dev , vol.21 , pp. 1833-1856
    • Isken, O.1    Maquat, L.E.2
  • 17
    • 33947159090 scopus 로고    scopus 로고
    • Translation of the poly(A) tail plays crucial roles in nonstop mRNA surveillance via translation repression and protein destabilization by proteasome in yeast
    • Ito-Harashima S, Kuroha K, Tatematsu T, Inada T (2007) Translation of the poly(A) tail plays crucial roles in nonstop mRNA surveillance via translation repression and protein destabilization by proteasome in yeast. Genes Dev 21: 519-524
    • (2007) Genes Dev , vol.21 , pp. 519-524
    • Ito-Harashima, S.1    Kuroha, K.2    Tatematsu, T.3    Inada, T.4
  • 18
    • 34648816826 scopus 로고    scopus 로고
    • Exporting RNA from the nucleus to the cytoplasm
    • Köhler A, Hurt E (2007) Exporting RNA from the nucleus to the cytoplasm. Nat Rev Mol Cell Biol 8: 761-773
    • (2007) Nat Rev Mol Cell Biol , vol.8 , pp. 761-773
    • Köhler, A.1    Hurt, E.2
  • 19
    • 0037398519 scopus 로고    scopus 로고
    • How introns influence and enhance eukaryotic gene expression
    • Le Hir H, Nott A, Moore MJ (2003) How introns influence and enhance eukaryotic gene expression. Trends Biochem Sci 28: 215-220
    • (2003) Trends Biochem Sci , vol.28 , pp. 215-220
    • Le Hir, H.1    Nott, A.2    Moore, M.J.3
  • 20
    • 57249097123 scopus 로고    scopus 로고
    • Developing Aspergillus as a host for heterologous expression
    • Lubertozzi D, Keasling JD (2009) Developing Aspergillus as a host for heterologous expression. Biotechnol Adv 27: 53-75
    • (2009) Biotechnol Adv , vol.27 , pp. 53-75
    • Lubertozzi, D.1    Keasling, J.D.2
  • 21
    • 56149109469 scopus 로고    scopus 로고
    • Genomics of Aspergillus oryzae: Learning from the history of koji mold and exploration of its future
    • Machida M, Yamada O, Gomi K (2008) Genomics of Aspergillus oryzae: learning from the history of koji mold and exploration of its future. DNA Res 15: 173-183
    • (2008) DNA Res , vol.15 , pp. 173-183
    • Machida, M.1    Yamada, O.2    Gomi, K.3
  • 23
    • 0037406116 scopus 로고    scopus 로고
    • A quantitative analysis of intron effects on mammalian gene expression
    • Nott A, Meislin SH, Moore MJ (2003) A quantitative analysis of intron effects on mammalian gene expression. RNA 9: 607-617
    • (2003) RNA , vol.9 , pp. 607-617
    • Nott, A.1    Meislin, S.H.2    Moore, M.J.3
  • 24
    • 82455210919 scopus 로고    scopus 로고
    • A carrier fusion significantly induces unfolded protein response in heterologous protein production by Aspergillus oryzae
    • Ohno A, Maruyama J, Nemoto T, Arioka M, Kitamoto K (2011) A carrier fusion significantly induces unfolded protein response in heterologous protein production by Aspergillus oryzae. Appl Microbiol Biotechnol 92: 1197-1206
    • (2011) Appl Microbiol Biotechnol , vol.92 , pp. 1197-1206
    • Ohno, A.1    Maruyama, J.2    Nemoto, T.3    Arioka, M.4    Kitamoto, K.5
  • 25
    • 0242581693 scopus 로고    scopus 로고
    • The effects of drugs inhibiting protein secretion in the filamentous fungus Trichoderma reesei. Evidence for down-regulation of genes that encode secreted proteins in the stressed cells
    • Pakula TM, Laxell M, Huuskonen A, Uusitalo J, Saloheimo M, Penttilä M (2003) The effects of drugs inhibiting protein secretion in the filamentous fungus Trichoderma reesei. Evidence for down-regulation of genes that encode secreted proteins in the stressed cells. J Biol Chem 278: 45011-45020
    • (2003) J Biol Chem , vol.278 , pp. 45011-45020
    • Pakula, T.M.1    Laxell, M.2    Huuskonen, A.3    Uusitalo, J.4    Saloheimo, M.5    Penttilä, M.6
  • 26
    • 57749203189 scopus 로고    scopus 로고
    • Analysis of cytoplasmic mRNA decay in Saccharomyces cerevisiae
    • Passos DO, Parker R (2008) Analysis of cytoplasmic mRNA decay in Saccharomyces cerevisiae. Methods Enzymol 448: 409-427
    • (2008) Methods Enzymol , vol.448 , pp. 409-427
    • Passos, D.O.1    Parker, R.2
  • 27
    • 0029950890 scopus 로고    scopus 로고
    • Nitrogen metabolite signaling involves the C-terminus and the GATA domain of the Aspergillus transcription factor AreA and the 3' untranslated region of its mRNA
    • Platt A, Langdon T, Arst HN, Kirk D, Tollervey D, Sanchez JM, Caddick MX (1996) Nitrogen metabolite signaling involves the C-terminus and the GATA domain of the Aspergillus transcription factor AreA and the 3' untranslated region of its mRNA. EMBO J 15: 2791-2801
    • (1996) EMBO J , vol.15 , pp. 2791-2801
    • Platt, A.1    Langdon, T.2    Arst, H.N.3    Kirk, D.4    Tollervey, D.5    Sanchez, J.M.6    Caddick, M.X.7
  • 29
    • 34249889847 scopus 로고    scopus 로고
    • Development of recombinant Aspergillus oryzae wholecell biocatalyst expressing lipase-encoding gene from Candida antarctica
    • Tamalampudi S, Rahman MMT, Hama S, Suzuki Y, Kondo A, Fukuda H (2007) Development of recombinant Aspergillus oryzae wholecell biocatalyst expressing lipase-encoding gene from Candida antarctica. Appl Microbiol Biotechnol 75: 387-395
    • (2007) Appl Microbiol Biotechnol , vol.75 , pp. 387-395
    • Tamalampudi, S.1    Rahman, M.M.T.2    Hama, S.3    Suzuki, Y.4    Kondo, A.5    Fukuda, H.6
  • 30
    • 79958855346 scopus 로고    scopus 로고
    • In silico analysis of 3'-end-processing signals in Aspergillus oryzae using expressed sequence tags and genomic sequencing data
    • Tanaka M, Sakai Y, Yamada O, Shintani T, Gomi K (2011) In silico analysis of 3'-end-processing signals in Aspergillus oryzae using expressed sequence tags and genomic sequencing data. DNA Res 18: 189-200
    • (2011) DNA Res , vol.18 , pp. 189-200
    • Tanaka, M.1    Sakai, Y.2    Yamada, O.3    Shintani, T.4    Gomi, K.5
  • 31
    • 55049127293 scopus 로고    scopus 로고
    • Codon optimization increases steady-state mRNA levels in Aspergillus oryzae heterologous gene expression
    • Tokuoka M, Tanaka M, Ono K, Takagi S, Shintani T, Gomi K (2008) Codon optimization increases steady-state mRNA levels in Aspergillus oryzae heterologous gene expression. Appl Environ Microbiol 74: 6538-6546
    • (2008) Appl Environ Microbiol , vol.74 , pp. 6538-6546
    • Tokuoka, M.1    Tanaka, M.2    Ono, K.3    Takagi, S.4    Shintani, T.5    Gomi, K.6
  • 35
    • 0037155584 scopus 로고    scopus 로고
    • Exosomemediated recognition and degradation of mRNAs lacking a termination codon
    • van Hoof A, Frischmeyer PA, Dietz HC, Parker R (2002) Exosomemediated recognition and degradation of mRNAs lacking a termination codon. Science 295: 2262-2264
    • (2002) Science , vol.295 , pp. 2262-2264
    • Van Hoof, A.1    Frischmeyer, P.A.2    Dietz, H.C.3    Parker, R.4
  • 36
    • 85009547782 scopus 로고    scopus 로고
    • Transformation system for Aspergillus oryzae with double auxotrophic mutations, niaD and sC
    • Yamada O, Lee BR, Gomi K (1997) Transformation system for Aspergillus oryzae with double auxotrophic mutations, niaD and sC. Biosci Biotechnol Biochem 61: 1367-1369
    • (1997) Biosci Biotechnol Biochem , vol.61 , pp. 1367-1369
    • Yamada, O.1    Lee, B.R.2    Gomi, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.