메뉴 건너뛰기




Volumn 42, Issue 12, 2012, Pages 2078-2089

A chronsequential approach to investigating microbial community shifts following clearcutting in Boreal plain forest soils

Author keywords

[No Author keywords available]

Indexed keywords

16S RDNA; 16S RDNA ANALYSIS; BOREAL PLAIN; CHRONOSEQUENCES; COMMUNITY COMPOSITION; COMMUNITY SIZE; CUTBLOCKS; DOUGLAS; FINGERPRINTING TECHNIQUES; FOREST HARVESTING; FOREST SOILS; FUNGAL BIOMASS; LODGEPOLE PINE; MICROBIAL BIOMASS; MICROBIAL COMMUNITIES; MICROBIAL COMMUNITY COMPOSITION; PHOSPHOLIPID FATTY ACID ANALYSIS; PINUS CONTORTA; POSTHARVEST; SOIL PARAMETERS;

EID: 84870891171     PISSN: 00455067     EISSN: 12086037     Source Type: Journal    
DOI: 10.1139/cjfr-2012-0038     Document Type: Review
Times cited : (13)

References (39)
  • 1
    • 0004034257 scopus 로고
    • Agriculture Canada Expert Committee on Soil Survey, Research Branch, Ottawa, Ont
    • Agriculture Canada Expert Committee on Soil Survey. 1987. The Canadian system of soil classification. Agriculture Canada, Research Branch, Ottawa, Ont.
    • (1987) The Canadian System of Soil Classification. Agriculture Canada
  • 2
    • 0028993958 scopus 로고
    • Microbial community structure and pH response in relation to soil organic matter quality in wood-ash fertilized, clear-cut or burned coniferous forest soils
    • doi:10.1016/0038-0717(94)00140-V
    • Bååth, E., Frostegård, A., Pennanen, T., and Fritze, H. 1995. Microbial community structure and pH response in relation to soil organic matter quality in wood-ash fertilized, clear-cut or burned coniferous forest soils. Soil Biol. Biochem. 27(2): 229-240. doi:10.1016/0038-0717(94)00140-V.
    • (1995) Soil Biol. Biochem , vol.27 , Issue.2 , pp. 229-240
    • Bååth, E.1    Frostegård, A.2    Pennanen, T.3    Fritze, H.4
  • 3
    • 4644279055 scopus 로고    scopus 로고
    • Clear-cutting affects the ammonia-oxidizing community differently in limed and non-limed coniferous forest soils
    • doi:10.1007/s00374-004-0779-6
    • Bäckman, J.S.K., Klemedtsson, A.K., Klemedtsson, L., and Lindgren, P. 2004. Clear-cutting affects the ammonia-oxidizing community differently in limed and non-limed coniferous forest soils. Biol. Fertil. Soils, 40(4): 260-267. doi:10.1007/s00374-004-0779-6.
    • (2004) Biol. Fertil. Soils , vol.40 , Issue.4 , pp. 260-267
    • Bäckman, J.S.K.1    Klemedtsson, A.K.2    Klemedtsson, L.3    Lindgren, P.4
  • 4
    • 33845261493 scopus 로고
    • A rapid method of total lipid extraction and purification
    • doi:10.1139/o59-099. PMID:13671378
    • Bligh, E.G., and Dyer, W.H. 1959. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol. 37(8): 911-917. doi:10.1139/o59-099. PMID:13671378.
    • (1959) Can. J. Biochem. Physiol , vol.37 , Issue.8 , pp. 911-917
    • Bligh, E.G.1    Dyer, W.H.2
  • 6
    • 80053911875 scopus 로고    scopus 로고
    • Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada
    • doi:10.1016/j.soilbio.2011.09.003
    • Brockett, B.F.T., Prescott, C.E., and Grayston, S.J. 2012. Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada. Soil Biol. Biochem. 44(1): 9-20. doi:10.1016/j.soilbio.2011.09.003.
    • (2012) Soil Biol. Biochem , vol.44 , Issue.1 , pp. 9-20
    • Brockett, B.F.T.1    Prescott, C.E.2    Grayston, S.J.3
  • 7
  • 8
    • 84870940228 scopus 로고    scopus 로고
    • Environment Canada., Prairie provinces. Environment Canada, Atmospheric Environmental Services, Ottawa, Ont
    • Environment Canada. 2011. Canadian climate normals 1961-1990. Temperature and precipitation. Prairie provinces. Environment Canada, Atmospheric Environmental Services, Ottawa, Ont.
    • (2011) Canadian Climate Normals 1961-1990. Temperature and Precipitation
  • 10
    • 0002404580 scopus 로고
    • Mycorrhizal mycelia and their role in soil and plant communities
    • Edited by M. Clarholm and L. Bergstrom. Kluwer, Dordtrecht, The Netherlands
    • Finlay, R., and Soderstrom, B. 1989. Mycorrhizal mycelia and their role in soil and plant communities. In Ecology of arable land. Edited by M. Clarholm and L. Bergstrom. Kluwer, Dordtrecht, The Netherlands. pp. 139-148.
    • (1989) Ecology of Arable Land , pp. 139-148
    • Finlay, R.1    Soderstrom, B.2
  • 11
    • 0029663947 scopus 로고    scopus 로고
    • The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil
    • doi:10.1007/BF00384433
    • Frostegård, A., and Bååth, E. 1996. The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil. Biol. Fertil. Soils, 22: 59-65. doi:10.1007/BF00384433.
    • (1996) Biol. Fertil. Soils , vol.22 , pp. 59-65
    • Frostegård, A.1    Bååth, E.2
  • 12
    • 0034313831 scopus 로고    scopus 로고
    • Effects of extensive forest management on soil productivity
    • doi:10.1016/S0378-1127(00)00395-9
    • Grigal, D.F. 2000. Effects of extensive forest management on soil productivity. For. Ecol. Manage. 138(1-3): 167-185. doi:10.1016/S0378-1127(00)00395-9.
    • (2000) For. Ecol. Manage , vol.138 , Issue.1-3 , pp. 167-185
    • Grigal, D.F.1
  • 13
    • 33746650042 scopus 로고    scopus 로고
    • Seasonal and long-term resource-related variations in soil microbial communities in wheat-based rotations of the Canadian prairie
    • doi:10.1016/j.soilbio.2006.01.011
    • Hamel, C., Hanson, K., Selles, F., Cruz, A.F., Lemke, R., McConkey, B., and Zentner, R. 2006. Seasonal and long-term resource-related variations in soil microbial communities in wheat-based rotations of the Canadian prairie. Soil Biol. Biochem. 38(8): 2104-2116. doi:10.1016/j.soilbio.2006.01.011.
    • (2006) Soil Biol. Biochem , vol.38 , Issue.8 , pp. 2104-2116
    • Hamel, C.1    Hanson, K.2    Selles, F.3    Cruz, A.F.4    Lemke, R.5    McConkey, B.6    Zentner, R.7
  • 14
    • 33846141042 scopus 로고    scopus 로고
    • Forest floor microbial communities in relation to stand composition and timber harvesting in northern Alberta
    • doi:10.1016/j.soilbio.2006.03.015
    • Hannam, K.D., Quideau, S.A., and Kishchuk, B.E. 2006. Forest floor microbial communities in relation to stand composition and timber harvesting in northern Alberta. Soil Biol. Biochem. 38(9): 2565-2575. doi:10.1016/j.soilbio.2006.03.015.
    • (2006) Soil Biol. Biochem , vol.38 , Issue.9 , pp. 2565-2575
    • Hannam, K.D.1    Quideau, S.A.2    Kishchuk, B.E.3
  • 15
    • 0000795968 scopus 로고
    • Clearcut harvesting and ectomycorrhizae: Survival of activity on residual roots and influence on a bordering forest stand in western Montana
    • doi:10.1139/x80-051
    • Harvey, A.E., Jurgensen, M.F., and Larsen, M.J. 1980. Clearcut harvesting and ectomycorrhizae: survival of activity on residual roots and influence on a bordering forest stand in western Montana. Can. J. For. Res. 10(3): 300-303. doi:10.1139/x80-051.
    • (1980) Can. J. For. Res , vol.10 , Issue.3 , pp. 300-303
    • Harvey, A.E.1    Jurgensen, M.F.2    Larsen, M.J.3
  • 16
    • 12944280924 scopus 로고    scopus 로고
    • Aspen harvest intensity decreases microbial biomass, extracellular enzyme activity, and soil nitrogen cycling
    • doi:10.2136/sssaj2005.0227
    • Hassett, J.E., and Zak, D.R. 2005. Aspen harvest intensity decreases microbial biomass, extracellular enzyme activity, and soil nitrogen cycling. SoilSci.Soc.Am.J.69(1):227-235. doi:10.2136/sssaj2005.0227.
    • (2005) SoilSci.Soc.Am.J , vol.69 , Issue.1 , pp. 227-235
    • Hassett, J.E.1    Zak, D.R.2
  • 17
    • 60549116521 scopus 로고    scopus 로고
    • Fungal and bacterial abundance in long-term no-till and intensive-till soils of the northern Great Plains
    • Helgason, B.L., Walley, F.L., and Germida, J.J. 2009. Fungal and bacterial abundance in long-term no-till and intensive-till soils of the northern Great Plains. Soil Biol. Biochem. 73: 120-127.
    • (2009) Soil Biol. Biochem , vol.73 , pp. 120-127
    • Helgason, B.L.1    Walley, F.L.2    Germida, J.J.3
  • 18
    • 78650177650 scopus 로고    scopus 로고
    • Long-term no-till management affects microbial biomass but not community composition in Canadian Prairie agroecosystems
    • doi:10.1016/j.soilbio.2010.08.015
    • Helgason, B.L., Walley, F.L., and Germida, J.J. 2010. Long-term no-till management affects microbial biomass but not community composition in Canadian Prairie agroecosystems. Soil Biol. Biochem. 42(12): 2192-2202. doi:10.1016/j.soilbio.2010.08.015.
    • (2010) Soil Biol. Biochem , vol.42 , Issue.12 , pp. 2192-2202
    • Helgason, B.L.1    Walley, F.L.2    Germida, J.J.3
  • 19
    • 12544249280 scopus 로고    scopus 로고
    • Structure and function of microbial communities in the rhizosphere of Scots pine after tree felling
    • doi:10.1016/j.soilbio.2004.10.010
    • Hernesmaa, A., Björklöf, K., Kiikkila, O., Fritze, H., Haahtela, K., and Romantschuk, M. 2005. Structure and function of microbial communities in the rhizosphere of Scots pine after tree felling. Soil Biol. Biochem. 37(4): 777-785. doi:10.1016/j.soilbio.2004.10.010.
    • (2005) Soil Biol. Biochem , vol.37 , Issue.4 , pp. 777-785
    • Hernesmaa, A.1    Björklöf, K.2    Kiikkila, O.3    Fritze, H.4    Haahtela, K.5    Romantschuk, M.6
  • 20
    • 82655169247 scopus 로고    scopus 로고
    • Relationship between ammonia oxidizing bacteria and bioavailable nitrogen in harvested forest soils of central Alberta
    • doi: 10.1016/j.soilbio.2011.10.018
    • Hynes, H.M., and Germida, J.J. 2012. Relationship between ammonia oxidizing bacteria and bioavailable nitrogen in harvested forest soils of central Alberta. Soil Biol. Biochem. 46: 18-25. doi: 10.1016/j.soilbio.2011.10.018.
    • (2012) Soil Biol. Biochem , vol.46 , pp. 18-25
    • Hynes, H.M.1    Germida, J.J.2
  • 21
    • 0020379005 scopus 로고
    • Bacteria in a pine forest soils affected by clearcutting
    • doi:10.1016/0038-0717(82)90083-9
    • Lundgren, B. 1982. Bacteria in a pine forest soils affected by clearcutting. Soil Biol. Biochem. 14(6): 537-542.doi:10.1016/0038-0717(82)90083-9.
    • (1982) Soil Biol. Biochem , vol.14 , Issue.6 , pp. 537-542
    • Lundgren, B.1
  • 23
    • 41049103646 scopus 로고    scopus 로고
    • PLFA profiling of microbial community structure and seasonal shifts in soils of a Douglas-fir chronosequence
    • doi:10.1007/s00248-007-9295-1. PMID:17786504
    • Moore-Kucera, J., and Dick, R.P. 2008. PLFA profiling of microbial community structure and seasonal shifts in soils of a Douglas-fir chronosequence. Microb. Ecol. 55(3): 500-511. doi:10.1007/s00248-007-9295-1. PMID:17786504.
    • (2008) Microb. Ecol , vol.55 , Issue.3 , pp. 500-511
    • Moore-Kucera, J.1    Dick, R.P.2
  • 24
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • PMID:7683183
    • Muyzer, G., De Waal, E.C., and Uitterlinden, A.G. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59(3): 695-700. PMID:7683183.
    • (1993) Appl. Environ. Microbiol , vol.59 , Issue.3 , pp. 695-700
    • Muyzer, G.1    de Waal, E.C.2    Uitterlinden, A.G.3
  • 25
    • 0035030027 scopus 로고    scopus 로고
    • Landscape-level patterns of microbial community composition and substrate use in upland forest ecosystems
    • doi:10.2136/sssaj2001.652359x
    • Myers, R.T., Zak, D.R., White, D.C., and Peacock, A. 2001. Landscape-level patterns of microbial community composition and substrate use in upland forest ecosystems. Soil Sci. Soc. Am. J. 65(2): 359-367. doi:10.2136/sssaj2001.652359x.
    • (2001) Soil Sci. Soc. Am. J , vol.65 , Issue.2 , pp. 359-367
    • Myers, R.T.1    Zak, D.R.2    White, D.C.3    Peacock, A.4
  • 26
    • 0017610592 scopus 로고
    • Effects of clear-cutting on the composition of bacterial populations of northern spruce forest soil
    • doi:10.1139/m77-019. PMID:13921
    • Niemelä, S., and Sundman, V. 1977. Effects of clear-cutting on the composition of bacterial populations of northern spruce forest soil. Can. J. Microbiol. 23(2): 131-138. doi:10.1139/m77-019. PMID:13921.
    • (1977) Can. J. Microbiol , vol.23 , Issue.2 , pp. 131-138
    • Niemelä, S.1    Sundman, V.2
  • 28
    • 0032875297 scopus 로고    scopus 로고
    • Structure of the microbial communities in coniferous forest soils in relation to site fertility and stand development stage
    • doi:10.1007/s002489900161. PMID:10441709
    • Pennanen, T., Liski, J., Bååth, E., Kitunen, V., Uotila, J., Westman, C.J., and Fritze, H. 1999. Structure of the microbial communities in coniferous forest soils in relation to site fertility and stand development stage. Microb. Ecol. 38(2): 168-179. doi:10.1007/s002489900161. PMID:10441709.
    • (1999) Microb. Ecol , vol.38 , Issue.2 , pp. 168-179
    • Pennanen, T.1    Liski, J.2    Bååth, E.3    Kitunen, V.4    Uotila, J.5    Westman, C.J.6    Fritze, H.7
  • 29
    • 34250803429 scopus 로고    scopus 로고
    • Culture-based and culture-independent assessment of the impact of mixed and single plant treatments on rhizosphere microbial communities in hydrocarbon contaminated flare-pit soil
    • doi:10.1016/j.soilbio.2006.04.038
    • Phillips, L.A., Greer, C.W., and Germida, J.J. 2006. Culture-based and culture-independent assessment of the impact of mixed and single plant treatments on rhizosphere microbial communities in hydrocarbon contaminated flare-pit soil. Soil Biol. Biochem. 38(9): 2823-2833. doi:10.1016/j.soilbio.2006.04.038.
    • (2006) Soil Biol. Biochem , vol.38 , Issue.9 , pp. 2823-2833
    • Phillips, L.A.1    Greer, C.W.2    Germida, J.J.3
  • 30
    • 0036164871 scopus 로고    scopus 로고
    • Phospholipid fatty acids in forest soil four years after organic matter removal and soil compaction
    • doi:10.1016/S0929-1393(01)00182-2
    • Ponder, F., Jr., and Tadros, M. 2002. Phospholipid fatty acids in forest soil four years after organic matter removal and soil compaction. Appl. Soil Ecol. 19(2): 173-182. doi:10.1016/S0929-1393(01)00182-2.
    • (2002) Appl. Soil Ecol , vol.19 , Issue.2 , pp. 173-182
    • Ponder Jr., F.1    Tadros, M.2
  • 31
    • 12944294368 scopus 로고    scopus 로고
    • Compaction alters physical but not biological indices of soil health
    • doi:10.2136/sssaj2005.0236
    • Shestak, C.J., and Busse, M.D. 2005. Compaction alters physical but not biological indices of soil health. Soil Sci. Soc. Am. J. 69(1): 236-246. doi:10.2136/sssaj2005.0236.
    • (2005) Soil Sci. Soc. Am. J , vol.69 , Issue.1 , pp. 236-246
    • Shestak, C.J.1    Busse, M.D.2
  • 32
    • 28444460124 scopus 로고    scopus 로고
    • The Forest Watershed and Riparian Disturbance study: A multi-discipline initiative to evaluate and manage watershed disturbance on the Boreal Plain of Canada
    • doi:10.1139/s03-030
    • Smith, D.W., Prepas, E.E., Putz, G., Burke, J.M., Meyer, W.L., and Whitson, I.R. 2003. The Forest Watershed and Riparian Disturbance study: a multi-discipline initiative to evaluate and manage watershed disturbance on the Boreal Plain of Canada. J. Environ. Eng. Sci. 2(S1): S1-S13. doi:10.1139/s03-030.
    • (2003) J. Environ. Eng. Sci , vol.2 , Issue.S1
    • Smith, D.W.1    Prepas, E.E.2    Putz, G.3    Burke, J.M.4    Meyer, W.L.5    Whitson, I.R.6
  • 33
    • 37849036782 scopus 로고    scopus 로고
    • Effects of wildfire and harvest disturbances on forest soil bacterial communities
    • doi:10.1128/AEM.01355-07. PMID:18024684
    • Smith, N.R., Kishchuk, B.E., and Mohn, W.W. 2008. Effects of wildfire and harvest disturbances on forest soil bacterial communities. Appl. Environ. Microbiol. 74(1): 216-224. doi:10.1128/AEM.01355-07. PMID:18024684.
    • (2008) Appl. Environ. Microbiol , vol.74 , Issue.1 , pp. 216-224
    • Smith, N.R.1    Kishchuk, B.E.2    Mohn, W.W.3
  • 34
    • 0033758417 scopus 로고    scopus 로고
    • Identification and characterization of ecologically significant prokaryotes in the sediment of freshwater lakes: Molecular and cultivation studies
    • doi:10.1111/j.1574-6976.2000.tb00559.x. PMID:11077151
    • Spring, S., Schulze, R., Overmann, J., and Schleifer, K.H. 2000. Identification and characterization of ecologically significant prokaryotes in the sediment of freshwater lakes: molecular and cultivation studies. FEMS Microbiol. Rev. 24(5): 573-590. doi:10.1111/j.1574-6976.2000.tb00559.x. PMID:11077151.
    • (2000) FEMS Microbiol. Rev , vol.24 , Issue.5 , pp. 573-590
    • Spring, S.1    Schulze, R.2    Overmann, J.3    Schleifer, K.H.4
  • 35
    • 0004292899 scopus 로고
    • Lands and Wildlife, Edmonton, Alta, Alberta Rep. No. T/245. Alberta Forestry
    • Strong, W.L., and Leggat, K.R. 1992. Ecoregions of Alberta. Alberta Rep. No. T/245. Alberta Forestry, Lands and Wildlife, Edmonton, Alta.
    • (1992) Ecoregions of Alberta
    • Strong, W.L.1    Leggat, K.R.2
  • 36
    • 62049084925 scopus 로고    scopus 로고
    • Microbial community structure and function: The effect of silvicultural burning and topographic variability in northern Alberta
    • doi:10.1016/j.soilbio.2009.01.014
    • Swallow, M., Quideau, S.A., MacKenzie, M.D., and Kishchuk, B.E. 2009. Microbial community structure and function: the effect of silvicultural burning and topographic variability in northern Alberta. Soil Biol. Biochem. 41(4): 770-777. doi:10.1016/j.soilbio.2009.01.014.
    • (2009) Soil Biol. Biochem , vol.41 , Issue.4 , pp. 770-777
    • Swallow, M.1    Quideau, S.A.2    Mackenzie, M.D.3    Kishchuk, B.E.4
  • 37
    • 77955777197 scopus 로고    scopus 로고
    • Production of mycorrhizal mycelium peaks during canopy closure in Norway spruce forests
    • doi:10.1111/j.1469-8137.2010.03324.x. PMID:20561206
    • Wallander, H., Johansson, U., Sterkenburg, E., Durling, M.B., and Lindahl, B.D. 2010. Production of mycorrhizal mycelium peaks during canopy closure in Norway spruce forests. New Phytol. 187(4): 1124-1134. doi:10.1111/j.1469-8137.2010.03324.x. PMID:20561206.
    • (2010) New Phytol , vol.187 , Issue.4 , pp. 1124-1134
    • Wallander, H.1    Johansson, U.2    Sterkenburg, E.3    Durling, M.B.4    Lindahl, B.D.5
  • 38
    • 0032773842 scopus 로고    scopus 로고
    • Soil temperature, matric potential, and the kinetics of microbial respiration and nitrogen mineralization
    • doi:10.2136/sssaj1999.03615995006300030021x
    • Zak, D.R., Holmes, W.E., MacDonald, N.W., and Pregitzer, K.S. 1999. Soil temperature, matric potential, and the kinetics of microbial respiration and nitrogen mineralization. Soil Sci. Soc. Am. J. 63(3): 575-584. doi:10.2136/sssaj1999.03615995006300030021x.
    • (1999) Soil Sci. Soc. Am. J , vol.63 , Issue.3 , pp. 575-584
    • Zak, D.R.1    Holmes, W.E.2    Macdonald, N.W.3    Pregitzer, K.S.4
  • 39
    • 0030609708 scopus 로고    scopus 로고
    • Compositional and functional shifts in microbial communities due to soil warming
    • doi:10.2136/sssaj1997.03615995006100020015x
    • Zogg, G.P., Zak, D.R., Ringelberg, D.B., White, D.C., MacDonald, N.W., MacDonald, N.W., and Pregitzer, K.S. 1997. Compositional and functional shifts in microbial communities due to soil warming. Soil Sci. Soc. Am. J. 61(2): 475-481. doi:10.2136/sssaj1997.03615995006100020015x.
    • (1997) Soil Sci. Soc. Am. J , vol.61 , Issue.2 , pp. 475-481
    • Zogg, G.P.1    Zak, D.R.2    Ringelberg, D.B.3    White, D.C.4    Macdonald, N.W.5    Macdonald, N.W.6    Pregitzer, K.S.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.