Pediococcus lolii DSM 19927Tand JCM 15055T are strains of Pediococcus acidilactici

International Journal of Systematic and Evolutionary Microbiology

Volumn 62, Issue 12, 2012, Pages 3105-3108

  Wieme, Anneleen ^a,b   Cleenwerck, Ilse ^c   Van Landschoot, Anita ^a,b   Vandamme, Peter ^b  

^a UNIVERSITY COLLEGE GHENT   (Belgium)

^b GHENT UNIVERSITY   (Belgium)

^c GHENT UNIVERSITY   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; RNA 16S;

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM ISOLATION; DNA DNA HYBRIDIZATION; GENE SEQUENCE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PEDIOCOCCUS ACIDILACTICI; PEDIOCOCCUS LOLII; PRIORITY JOURNAL; TAXONOMY; TIME OF FLIGHT MASS SPECTROMETRY;

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM ANALYSIS; BACTERIAL TYPING TECHNIQUES; DNA, BACTERIAL; LOLIUM; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PEDIOCOCCUS; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SILAGE; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

LOLIUM; PEDIOCOCCUS; PEDIOCOCCUS ACIDILACTICI;

EID: 84870886119     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.046201-0     Document Type: Article

References (13)

1. De Bruyne, K., Franz, C. M. A. P., Vancanneyt, M., Schillinger, U., Mozzi, F., de Valdez, G. F., De Vuyst, L. & Vandamme, P. (2008). Pediococcus argentinicus sp. nov. from Argentinean fermented wheat flour and identification of Pediococcus species by pheS, rpoA and atpA sequence analysis. Int J Syst Evol Microbiol 58, 2909-2916.
2. Doi, K., Nishizaki, Y., Fujino, Y., Ohshima, T., Ohmomo, S. & Ogata, S. (2009). Pediococcus lolii sp. nov., isolated from ryegrass silage. Int J Syst Evol Microbiol 59, 1007-1010.
3. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid deoxyribonucleic acid hybridization in micro-dilution wells as an alternative to membrane-filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
4. Franz, C. M. A. P., Vancanneyt, M., Vandemeulebroecke, K., De Wachter, M., Cleenwerck, I., Hoste, B., Schillinger, U., Holzapfel, W. H. & Swings, J. (2006). Pediococcus stilesii sp. nov., isolated from maize grains. Int J Syst Evol Microbiol 56, 329-333.
5. Goris, J., Suzuki, K., De Vos, P., Nakase, T. & Kersters, K. (1998). Evaluation of a microplate DNA-DNA hybridization method compared with the initial renaturation method. Can J Microbiol 44, 1148-1153.
6. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
7. Naser, S. M., Thompson, F. L., Hoste, B., Gevers, D., Dawyndt, P., Vancanneyt, M. & Swings, J. (2005). Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes. Microbiology 151, 2141-2150.
8. Naser, S. M., Dawyndt, P., Hoste, B., Gevers, D., Vandemeulebroecke, K., Cleenwerck, I., Vancanneyt, M. & Swings, J. (2007). Identification of lactobacilli by pheS and rpoA gene sequence analyses. Int J Syst Evol Microbiol 57, 2777-2789.
9. Sistek, V., Maheux, A. F., Boissinot, M., Bernard, K. A., Cantin, P., Cleenwerck, I., De Vos, P. & Bergeron, M. G. (2012). Enterococcus ureasiticus sp. nov. and Enterococcus quebecensis sp. nov., isolated from water. Int J Syst Evol Microbiol 62, 1314-1320.
10. Stackebrandt, E. & Kandler, O. (1979). Taxonomy of the genus Cellulomonas, based on phenotypic characters and deoxyribonucleic acid-deoxyribonucleic acid homology and proposal of seven neotype strains. Int J Syst Bacteriol 29, 273-282.
11. Strohalm, M., Kavan, D., Novák, P., Volný, M. & Havlícek, V. (2010). mMass 3: a cross-platform software environment for precise analysis of mass spectrometric data. Anal Chem 82, 4648-4651.
12. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum par-simony methods. Mol Biol Evol 28, 2731-2739.
13. Vancanneyt, M., Mengaud, J., Cleenwerck, I., Vanhonacker, K., Hoste, B., Dawyndt, P., Degivry, M. C., Ringuet, D., Janssens, D. & Swings, J. (2004). Reclassification of Lactobacillus kefirgranum Takizawa et al. 1994 as Lactobacillus kefiranofaciens subsp. kefirgra-num subsp. nov. and emended description of L. kefiranofaciens Fujisawa et al. 1988. Int J Syst Evol Microbiol 54, 551-556.