-
1
-
-
16844386538
-
Practical approaches to efficient screening: information-rich screening protocol
-
Karnachi PS, Brown FK.Practical approaches to efficient screening: information-rich screening protocol. Journal of Biomolecular Screening 2004; 9:678-686.
-
(2004)
Journal of Biomolecular Screening
, vol.9
, pp. 678-686
-
-
Karnachi, P.S.1
Brown, F.K.2
-
2
-
-
28944451649
-
Identifying biologically active compound clusters using phenotypic screening data and sampling statistics
-
Klekota J, Brauner E, Schreiber SL.Identifying biologically active compound clusters using phenotypic screening data and sampling statistics. Journal of Chemical Information and Modeling 2005; 45:1824-1836.
-
(2005)
Journal of Chemical Information and Modeling
, vol.45
, pp. 1824-1836
-
-
Klekota, J.1
Brauner, E.2
Schreiber, S.L.3
-
5
-
-
78650703690
-
Compound set enrichment: a novel approach to analysis of primary HTS data
-
Varin T, Gubler H, Parker CN, Zhang JH, Raman P, Ertl P, Schuffenhauer A.Compound set enrichment: a novel approach to analysis of primary HTS data. Journal of Chemical Information and Modeling 2010; 50(12):2067-2078.
-
(2010)
Journal of Chemical Information and Modeling
, vol.50
, Issue.12
, pp. 2067-2078
-
-
Varin, T.1
Gubler, H.2
Parker, C.N.3
Zhang, J.H.4
Raman, P.5
Ertl, P.6
Schuffenhauer, A.7
-
6
-
-
35848929692
-
A probability-based approach for the analysis of large-scale RNAi screens
-
König R, Chiang CY, Tu BP, Yan SF, DeJesus PD, Romero A, Bergauer T, Orth A, Krueger U, Zhou Y, Chanda SK.A probability-based approach for the analysis of large-scale RNAi screens. Nature Methods 2007; 4(10):847-849.
-
(2007)
Nature Methods
, vol.4
, Issue.10
, pp. 847-849
-
-
König, R.1
Chiang, C.Y.2
Tu, B.P.3
Yan, S.F.4
DeJesus, P.D.5
Romero, A.6
Bergauer, T.7
Orth, A.8
Krueger, U.9
Zhou, Y.10
Chanda, S.K.11
-
7
-
-
49249110204
-
Hit selection with false discovery rate control in genome-scale RNAi screens
-
Zhang XD, Kuan PF, Ferrer M, Shu X, Liu YC, Gates AT, Kunapuli P, Stec EM, Xu M, Marine SD, et al.Hit selection with false discovery rate control in genome-scale RNAi screens. Nucleic Acids Research 2008; 36(14):4667-4679.
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.14
, pp. 4667-4679
-
-
Zhang, X.D.1
Kuan, P.F.2
Ferrer, M.3
Shu, X.4
Liu, Y.C.5
Gates, A.T.6
Kunapuli, P.7
Stec, E.M.8
Xu, M.9
Marine, S.D.10
-
8
-
-
32344448950
-
Statistical practice in high-throughput screening data analysis
-
Malo N, Hanley JA, Cerquozzi S, Pelletier J, Nadon R.Statistical practice in high-throughput screening data analysis. Nature Biotechnology 2006; 24:167-175.
-
(2006)
Nature Biotechnology
, vol.24
, pp. 167-175
-
-
Malo, N.1
Hanley, J.A.2
Cerquozzi, S.3
Pelletier, J.4
Nadon, R.5
-
9
-
-
0003684449
-
-
Springer: New York NY
-
Hastie T, Tibshirani R, Friedman J.The Elements of Statistical Learning: Data Mining, Inference, and Prediction. Springer: New York NY, 2011.
-
(2011)
The Elements of Statistical Learning: Data Mining, Inference, and Prediction
-
-
Hastie, T.1
Tibshirani, R.2
Friedman, J.3
-
10
-
-
0023453329
-
Silhouettes: a graphical aid to the interpretation and validation of cluster analysis
-
Rousseeuw PJ.Silhouettes: a graphical aid to the interpretation and validation of cluster analysis. Journal of Computational and Applied Mathematics 1987; 20:53-65.
-
(1987)
Journal of Computational and Applied Mathematics
, vol.20
, pp. 53-65
-
-
Rousseeuw, P.J.1
-
12
-
-
3242719884
-
Application of chemoinformatics to high-throughput screening: practical considerations
-
Parker CN, Schreyer SK.Application of chemoinformatics to high-throughput screening: practical considerations. Methods in Molecular Biology 2004; 275:85-110.
-
(2004)
Methods in Molecular Biology
, vol.275
, pp. 85-110
-
-
Parker, C.N.1
Schreyer, S.K.2
-
14
-
-
33947638491
-
Application of a mixture model for determining the cutoff threshold for activity in high-throughput screening
-
Tong DM, Buxser S, Vidmar TJ.Application of a mixture model for determining the cutoff threshold for activity in high-throughput screening. Computational Statistics & Data Analysis 2007; 51:4002-4012.
-
(2007)
Computational Statistics & Data Analysis
, vol.51
, pp. 4002-4012
-
-
Tong, D.M.1
Buxser, S.2
Vidmar, T.J.3
-
15
-
-
33244482848
-
Enrichment of high-throughput screening data with increasing levels of noise using support vector machines, recursive partitioning, and Laplacian-modified naive Bayesian classifiers
-
Glick M, Jenkins JL, Nettles JH, Hitchings H, Davies JW.Enrichment of high-throughput screening data with increasing levels of noise using support vector machines, recursive partitioning, and Laplacian-modified naive Bayesian classifiers. Journal of Chemical Information and Modeling 2006; 46(1):193-200.
-
(2006)
Journal of Chemical Information and Modeling
, vol.46
, Issue.1
, pp. 193-200
-
-
Glick, M.1
Jenkins, J.L.2
Nettles, J.H.3
Hitchings, H.4
Davies, J.W.5
-
16
-
-
26944503021
-
Using extended-connectivity fingerprints with Laplacian-modified Bayesian analysis in high-throughput screening follow-up
-
Rogers D, Brown RD, Hahn M.Using extended-connectivity fingerprints with Laplacian-modified Bayesian analysis in high-throughput screening follow-up. Journal of Biomolecular Screening 2005; 10:682-686.
-
(2005)
Journal of Biomolecular Screening
, vol.10
, pp. 682-686
-
-
Rogers, D.1
Brown, R.D.2
Hahn, M.3
-
17
-
-
0033217466
-
Analysis of a large structure/biological activity data set using recursive partitioning
-
Rusinko A III, Farmen MW, Lambert CG, Brown PL, Young SS.Analysis of a large structure/biological activity data set using recursive partitioning. Journal of Chemical Information and Computer Sciences 1999; 39:1017-1026.
-
(1999)
Journal of Chemical Information and Computer Sciences
, vol.39
, pp. 1017-1026
-
-
Rusinko, A.I.1
Farmen, M.W.2
Lambert, C.G.3
Brown, P.L.4
Young, S.S.5
-
18
-
-
43049157546
-
Support vector machines approach for virtual screening of active compounds of single and multiple mechanisms from large libraries at an improved hit-rate and enrichment factor
-
Han LY, Ma XH, Lin HH, Jia J, Zhu F, Xue Y, Li ZR, Cao ZW, Ji ZL, Chen YZ.Support vector machines approach for virtual screening of active compounds of single and multiple mechanisms from large libraries at an improved hit-rate and enrichment factor. Journal of Molecular Graphics & Modelling 2008; 26(8):1276-1286.
-
(2008)
Journal of Molecular Graphics & Modelling
, vol.26
, Issue.8
, pp. 1276-1286
-
-
Han, L.Y.1
Ma, X.H.2
Lin, H.H.3
Jia, J.4
Zhu, F.5
Xue, Y.6
Li, Z.R.7
Cao, Z.W.8
Ji, Z.L.9
Chen, Y.Z.10
-
19
-
-
33749852183
-
An ultraefficient affinity-based high-throughput screening process: application to bacterial cell wall biosynthesis enzyme MurF
-
Comess KM, Schurdak ME, Voorbach MJ, Coen M, Trumbull JD, Yang H, Gao L, Tang H, Cheng X, Lerner CG, McCall JO, Burns DJ, Beutel BA.An ultraefficient affinity-based high-throughput screening process: application to bacterial cell wall biosynthesis enzyme MurF. Journal of Biomolecular Screening 2006; 11:743-754.
-
(2006)
Journal of Biomolecular Screening
, vol.11
, pp. 743-754
-
-
Comess, K.M.1
Schurdak, M.E.2
Voorbach, M.J.3
Coen, M.4
Trumbull, J.D.5
Yang, H.6
Gao, L.7
Tang, H.8
Cheng, X.9
Lerner, C.G.10
McCall, J.O.11
Burns, D.J.12
Beutel, B.A.13
-
20
-
-
71949130633
-
Review article: high-throughput affinity-based technologies for small-molecule drug discovery
-
Zhu Z, Cuozzo J.Review article: high-throughput affinity-based technologies for small-molecule drug discovery. Journal of Biomolecular Screening 2009; 14:1157-1164.
-
(2009)
Journal of Biomolecular Screening
, vol.14
, pp. 1157-1164
-
-
Zhu, Z.1
Cuozzo, J.2
-
21
-
-
33745859416
-
Methods for mining HTS data
-
Harper G, Pickett S.Methods for mining HTS data. Drug Discovery Today 2006; 11(15-16):694-699.
-
(2006)
Drug Discovery Today
, vol.11
, Issue.15-16
, pp. 694-699
-
-
Harper, G.1
Pickett, S.2
-
24
-
-
0029894013
-
The properties of known drugs. 1. Molecular frameworks
-
Bemis GW, Murcko MA.The properties of known drugs. 1. Molecular frameworks. Journal of Medicinal Chemistry 1996; 39:2887-2893.
-
(1996)
Journal of Medicinal Chemistry
, vol.39
, pp. 2887-2893
-
-
Bemis, G.W.1
Murcko, M.A.2
-
25
-
-
84870888157
-
-
Accelrys Software Inc.. Accelrys Software Inc.: Pipeline Pilot,San Diego
-
Accelrys Software Inc.Chemistry Collection: Basic Chemistry User Guide. Accelrys Software Inc.: Pipeline Pilot, San Diego, 2010.
-
(2010)
Chemistry Collection: Basic Chemistry User Guide
-
-
-
27
-
-
0001677717
-
Controlling the false discovery rate: a practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y.Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society Series B 1995; 57:289-300.
-
(1995)
Journal of the Royal Statistical Society Series B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
28
-
-
54949126376
-
FlexMix. Version 2: finite mixtures with concomitant variales and varying and constant parameters
-
Grün B, Leisch F.FlexMix. Version 2: finite mixtures with concomitant variales and varying and constant parameters. Journal of Statistical Software 2008; 28(4):1-35.
-
(2008)
Journal of Statistical Software
, vol.28
, Issue.4
, pp. 1-35
-
-
Grün, B.1
Leisch, F.2
|