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Volumn 53, Issue 12, 2012, Pages 2142-2152

Overexpression of OsRecQl4 and/or OsExo1 enhances DSB-induced homologous recombination in rice

Author keywords

DSB; HR; OsExo1; OsRecQl4; resection step; rice

Indexed keywords

BETA GLUCURONIDASE; EXODEOXYRIBONUCLEASE; EXODEOXYRIBONUCLEASE I; PLANT DNA; RECQ HELICASE; SINGLE STRANDED DNA; VEGETABLE PROTEIN;

EID: 84870797884     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcs155     Document Type: Article
Times cited : (32)

References (44)
  • 1
    • 30944466384 scopus 로고    scopus 로고
    • Arabidopsis RecQl4A suppresses homologous recombination and modulates DNA damage responses
    • Bagherieh-Najjar, M.B., de Vries, O.M.H., Hille, J. and Dijkwel, P.P. (2005) Arabidopsis RecQl4A suppresses homologous recombination and modulates DNA damage responses. Plant J. 43: 789-798.
    • (2005) Plant J , vol.43 , pp. 789-798
    • Bagherieh-Najjar, M.B.1    De Vries, O.M.H.2    Hille, J.3    Dijkwel, P.P.4
  • 3
    • 67749147467 scopus 로고    scopus 로고
    • Increased gene targeting in Ku70 and Xrcc4 transiently deficient human somatic cells
    • Bertolini, L.R., Bertolini, M., Maga, E.A., Madden, K.R. and Murray, J.D. (2009) Increased gene targeting in Ku70 and Xrcc4 transiently deficient human somatic cells. Mol. Biotechnol. 41: 106-114.
    • (2009) Mol. Biotechnol , vol.41 , pp. 106-114
    • Bertolini, L.R.1    Bertolini, M.2    Maga, E.A.3    Madden, K.R.4    Murray, J.D.5
  • 4
    • 79960064013 scopus 로고    scopus 로고
    • Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
    • Cermak, T., Doyle, E.L., Christian, M., Wang, L., Zhang, Y., Schmidt, C. et al. (2011) Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res. 39: e82.
    • (2011) Nucleic Acids Res , vol.39
    • Cermak, T.1    Doyle, E.L.2    Christian, M.3    Wang, L.4    Zhang, Y.5    Schmidt, C.6
  • 5
    • 27744530147 scopus 로고    scopus 로고
    • Zinc finger nucleases: Custom-designed molecular scissors for genome engineering of plant and mammalian cells
    • Durai, S., Mani, M., Kandavelou, K., Wu, J., Porteus, M.H. and Chandrasegaran, S. (2005) Zinc finger nucleases: custom-designed molecular scissors for genome engineering of plant and mammalian cells. Nucleic Acids Res. 33: 5978-5990.
    • (2005) Nucleic Acids Res , vol.33 , pp. 5978-5990
    • Durai, S.1    Mani, M.2    Kandavelou, K.3    Wu, J.4    Porteus, M.H.5    Chandrasegaran, S.6
  • 7
    • 0030898435 scopus 로고    scopus 로고
    • Exonuclease i of Saccharomyces cerevisiae functions in mitotic recombination in vivo and in vitro
    • Fiorentini, P., Huang, K.N., Tishkoff, D.X., Kolodner, R.D. and Symington, L.S. (1997) Exonuclease I of Saccharomyces cerevisiae functions in mitotic recombination in vivo and in vitro. Mol. Cell. Biol. 17: 2764-2773.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 2764-2773
    • Fiorentini, P.1    Huang, K.N.2    Tishkoff, D.X.3    Kolodner, R.D.4    Symington, L.S.5
  • 8
    • 0026583875 scopus 로고
    • Two alternative pathways of double-strand break repair that are kinetically separable and independently modulated
    • Fishman-Lobell, J., Rudin, N. and Haber, J.E. (1992) Two alternative pathways of double-strand break repair that are kinetically separable and independently modulated. Mol. Cell. Biol. 12: 1292-1303.
    • (1992) Mol. Cell. Biol , vol.12 , pp. 1292-1303
    • Fishman-Lobell, J.1    Rudin, N.2    Haber, J.E.3
  • 9
    • 42149134256 scopus 로고    scopus 로고
    • Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase lambda and RPA subunit proteins, is involved in cell proliferation
    • Furukawa, T., Imamura, T., Kitamoto, H.K. and Shimada, H. (2008) Rice exonuclease-1 homologue, OsEXO1, that interacts with DNA polymerase lambda and RPA subunit proteins, is involved in cell proliferation. Plant Mol. Biol. 66: 519-531.
    • (2008) Plant Mol. Biol , vol.66 , pp. 519-531
    • Furukawa, T.1    Imamura, T.2    Kitamoto, H.K.3    Shimada, H.4
  • 10
    • 53649090109 scopus 로고    scopus 로고
    • DNA helicases Sgs1 and BLM promote DNA double-strand break resection
    • Gravel, S., Chapman, J.R., Magill, C. and Jackson, S.P. (2008) DNA helicases Sgs1 and BLM promote DNA double-strand break resection. Genes Dev. 22: 2767-2772.
    • (2008) Genes Dev , vol.22 , pp. 2767-2772
    • Gravel, S.1    Chapman, J.R.2    Magill, C.3    Jackson, S.P.4
  • 11
    • 30944447473 scopus 로고    scopus 로고
    • The RecQ gene family in plants
    • Hartung, F. and Puchta, H. (2006) The RecQ gene family in plants. J. Plant Physiol. 163: 287-296.
    • (2006) J. Plant Physiol , vol.163 , pp. 287-296
    • Hartung, F.1    Puchta, H.2
  • 12
    • 36749085205 scopus 로고    scopus 로고
    • Two closely related RecQ helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana
    • Hartung, F., Suer, S. and Puchta, H. (2007) Two closely related RecQ helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana. Proc. Natl Acad. Sci. USA 104: 18836-18841.
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , pp. 18836-18841
    • Hartung, F.1    Suer, S.2    Puchta, H.3
  • 13
    • 78149425175 scopus 로고    scopus 로고
    • Regulation of homologous recombination in eukaryotes
    • Heyer, W.D., Ehmsen, K.T. and Liu, J. (2010) Regulation of homologous recombination in eukaryotes. Annu. Rev. Genet. 44: 113-139.
    • (2010) Annu. Rev. Genet , vol.44 , pp. 113-139
    • Heyer, W.D.1    Ehmsen, K.T.2    Liu, J.3
  • 14
    • 0342444416 scopus 로고
    • GUS fusions: Beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants
    • Jefferson, R.A., Kavanagh, T.A. and Bevan, M.W. (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6: 3901-3907.
    • (1987) EMBO J , vol.6 , pp. 3901-3907
    • Jefferson, R.A.1    Kavanagh, T.A.2    Bevan, M.W.3
  • 15
    • 70350418861 scopus 로고    scopus 로고
    • Bloom DNA helicase facilitates homologous recombination between diverged homologous sequences
    • Kikuchi, K., Abdel-Aziz, H.I., Taniguchi, Y., Yamazoe, M., Takeda, S. and Hirota, K. (2009) Bloom DNA helicase facilitates homologous recombination between diverged homologous sequences. J. Biol. Chem. 284: 26360-26367.
    • (2009) J. Biol. Chem , vol.284 , pp. 26360-26367
    • Kikuchi, K.1    Abdel-Aziz, H.I.2    Taniguchi, Y.3    Yamazoe, M.4    Takeda, S.5    Hirota, K.6
  • 16
    • 78649789095 scopus 로고    scopus 로고
    • A simple set of plasmids for the production of transgenic plants
    • Kuroda, M., Kimizu, M. and Mikami, C. (2010) A simple set of plasmids for the production of transgenic plants. Biosci. Biotechnol. Biochem. 74: 2348-2351.
    • (2010) Biosci. Biotechnol. Biochem , vol.74 , pp. 2348-2351
    • Kuroda, M.1    Kimizu, M.2    Mikami, C.3
  • 17
    • 4444283612 scopus 로고    scopus 로고
    • RecQ helicase enhances homologous recombination in plants
    • Li, H.Q., Terada, R., Li, M.R. and Iida, S. (2004) RecQ helicase enhances homologous recombination in plants. FEBS Lett. 574: 151-155.
    • (2004) FEBS Lett , vol.574 , pp. 151-155
    • Li, H.Q.1    Terada, R.2    Li, M.R.3    Iida, S.4
  • 18
    • 79953796527 scopus 로고    scopus 로고
    • Homologous recombination in plants: An antireview
    • Lieberman-Lazarovich, M. and Levy, A.A. (2011) Homologous recombination in plants: an antireview. Methods Mol. Biol. 701: 51-65.
    • (2011) Methods Mol. Biol , vol.701 , pp. 51-65
    • Lieberman-Lazarovich, M.1    Levy, A.A.2
  • 19
    • 78649518584 scopus 로고    scopus 로고
    • RAD5A RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana
    • Mannuss, A., Dukowic-Schulze, S., Suer, S., Hartung, F., Pacher, M. and Puchta, H. (2010) RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana. Plant Cell 22: 3318-3330.
    • (2010) Plant Cell , vol.22 , pp. 3318-3330
    • Mannuss, A.1    Dukowic-Schulze, S.2    Suer, S.3    Hartung, F.4    Pacher, M.5    Puchta, H.6
  • 20
    • 53649104599 scopus 로고    scopus 로고
    • Exo1 and Sgs1 collaborate in DNA double-strand break processing
    • Mimitou, E.P. and Symington, L.S. (2008) Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing. Nature 455: 770-774.
    • (2008) Nature , vol.455 , pp. 770-774
    • Mimitou, E.P.1    Symington, L.S.2
  • 22
    • 84868601106 scopus 로고    scopus 로고
    • Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice
    • Nishizawa-Yokoi, A., Nonaka, S., Saika, H., Kwon, Y.-I., Osakabe, K. and Toki, S. (2012) Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice. New Phytol. 196: 1048-1059.
    • (2012) New Phytol , vol.196 , pp. 1048-1059
    • Nishizawa-Yokoi, A.1    Nonaka, S.2    Saika, H.3    Kwon, Y.-I.4    Osakabe, K.5    Toki, S.6
  • 23
    • 79952699328 scopus 로고    scopus 로고
    • Estrogen-inducible GFP expression patterns in rice (Oryza sativa L.)
    • Okuzaki, A., Konagaya, K., Nanasato, Y., Tsuda, M. and Tabei, Y. (2011) Estrogen-inducible GFP expression patterns in rice (Oryza sativa L.). Plant Cell Rep. 30: 529-538.
    • (2011) Plant Cell Rep , vol.30 , pp. 529-538
    • Okuzaki, A.1    Konagaya, K.2    Nanasato, Y.3    Tsuda, M.4    Tabei, Y.5
  • 25
    • 84870062960 scopus 로고    scopus 로고
    • The requirement for recombination factors differs considerably between different pathways of homologous doublestrand break repair in somatic plant cells
    • Press
    • Roth, N., Klimesch, J., Dukowic-Schulze, S., Pacher, M., Mannuss, A. and Puchta, H. (2012) The requirement for recombination factors differs considerably between different pathways of homologous doublestrand break repair in somatic plant cells. Plant J. (in press).
    • (2012) Plant J.
    • Roth, N.1    Klimesch, J.2    Dukowic-Schulze, S.3    Pacher, M.4    Mannuss, A.5    Puchta, H.6
  • 26
    • 67849103752 scopus 로고    scopus 로고
    • Towards a highly efficient gene targeting system in higher plants
    • Saika, H. and Toki, S. (2009) Towards a highly efficient gene targeting system in higher plants. Jpn. Agric. Res. Q. 43: 81-85.
    • (2009) Jpn. Agric. Res. Q , vol.43 , pp. 81-85
    • Saika, H.1    Toki, S.2
  • 29
    • 66249147273 scopus 로고    scopus 로고
    • Precise genome modification in the crop species Zea mays using zinc-finger nucleases
    • Shukla, V.K., Doyon, Y., Miller, J.C., DeKelver, R.C., Moehle, E.A., Worden, S.E. et al. (2009) Precise genome modification in the crop species Zea mays using zinc-finger nucleases. Nature 459: 437-441.
    • (2009) Nature , vol.459 , pp. 437-441
    • Shukla, V.K.1    Doyon, Y.2    Miller, J.C.3    Dekelver, R.C.4    Moehle, E.A.5    Worden, S.E.6
  • 30
    • 0036016441 scopus 로고    scopus 로고
    • Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome
    • Siebert, R. and Puchta, H. (2002) Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome. Plant Cell 14: 1121-1131.
    • (2002) Plant Cell , vol.14 , pp. 1121-1131
    • Siebert, R.1    Puchta, H.2
  • 31
    • 67349230444 scopus 로고    scopus 로고
    • Roles of RECQ helicases in recombination based DNA repair, genomic stability and aging
    • Singh, D.K., Ahn, B. and Bohr, V.A. (2009) Roles of RECQ helicases in recombination based DNA repair, genomic stability and aging. Biogerontology 10: 235-252.
    • (2009) Biogerontology , vol.10 , pp. 235-252
    • Singh, D.K.1    Ahn, B.2    Bohr, V.A.3
  • 32
    • 84864499620 scopus 로고    scopus 로고
    • RecQ helicases in DNA double strand break repair and telomere maintenance
    • Singh, D.K., Ghosh, A.K., Croteau, D.L. and Bohr, V.A. (2011) RecQ helicases in DNA double strand break repair and telomere maintenance. Mutat. Res. 736: 15-24.
    • (2011) Mutat. Res , vol.736 , pp. 15-24
    • Singh, D.K.1    Ghosh, A.K.2    Croteau, D.L.3    Bohr, V.A.4
  • 33
    • 77954679308 scopus 로고    scopus 로고
    • DNA repair and recombination in higher plants: Insights from comparative genomics of Arabidopsis and rice
    • Singh, S.K., Roy, S., Choudhury, S.R. and Sengupta, D.N. (2010) DNA repair and recombination in higher plants: insights from comparative genomics of Arabidopsis and rice. BMC Genomics 11: 443.
    • (2010) BMC Genomics , vol.11 , pp. 443
    • Singh, S.K.1    Roy, S.2    Choudhury, S.R.3    Sengupta, D.N.4
  • 34
    • 80755187806 scopus 로고    scopus 로고
    • Double-strand break end resection and repair pathway choice
    • Symington, L.S. and Gautier, J. (2011) Double-strand break end resection and repair pathway choice. Annu. Rev. Genet. 45: 247-271.
    • (2011) Annu. Rev. Genet , vol.45 , pp. 247-271
    • Symington, L.S.1    Gautier, J.2
  • 35
    • 0026744690 scopus 로고
    • A DNA exonuclease induced during meiosis of Schizosaccharomyces pombe
    • Szankasi, P. and Smith, G.R. (1992) A DNA exonuclease induced during meiosis of Schizosaccharomyces pombe. J. Biol. Chem. 267: 3014-3023.
    • (1992) J. Biol. Chem , vol.267 , pp. 3014-3023
    • Szankasi, P.1    Smith, G.R.2
  • 36
    • 0028917096 scopus 로고
    • A role for exonuclease i from S. pombe in mutation avoidance and mismatch correction
    • Szankasi, P. and Smith, G.R. (1995) A role for exonuclease I from S. pombe in mutation avoidance and mismatch correction. Science 267: 1166-1169.
    • (1995) Science , vol.267 , pp. 1166-1169
    • Szankasi, P.1    Smith, G.R.2
  • 37
    • 77952741351 scopus 로고    scopus 로고
    • High efficient gene targeting on the AGAMOUS gene in an ArabidopsisAtLIG4 mutant
    • Tanaka, S., Ishii, C., Hatakeyama, S. and Inoue, H. (2010) High efficient gene targeting on the AGAMOUS gene in an ArabidopsisAtLIG4 mutant. Biochem. Biophys. Res. Commun. 396: 289-293.
    • (2010) Biochem. Biophys. Res. Commun , vol.396 , pp. 289-293
    • Tanaka, S.1    Ishii, C.2    Hatakeyama, S.3    Inoue, H.4
  • 38
    • 0032533518 scopus 로고    scopus 로고
    • Identification of a human gene encoding a homologue of Saccharomyces cerevisiae EXO1, an exonuclease implicated in mismatch repair and recombination
    • Tishkoff, D.X., Amin, N.S., Viars, C.S., Arden, K.C. and Kolodner, R.D. (1998) Identification of a human gene encoding a homologue of Saccharomyces cerevisiae EXO1, an exonuclease implicated in mismatch repair and recombination. Cancer Res. 58: 5027-5031.
    • (1998) Cancer Res , vol.58 , pp. 5027-5031
    • Tishkoff, D.X.1    Amin, N.S.2    Viars, C.S.3    Arden, K.C.4    Kolodner, R.D.5
  • 39
    • 0031524467 scopus 로고    scopus 로고
    • Rapid and efficient Agrobacterium-mediated transformation in rice
    • Toki, S. (1997) Rapid and efficient Agrobacterium-mediated transformation in rice. Plant Mol. Biol. Rep. 15: 16-21.
    • (1997) Plant Mol. Biol. Rep , vol.15 , pp. 16-21
    • Toki, S.1
  • 40
    • 33748319354 scopus 로고    scopus 로고
    • Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice
    • Toki, S., Hara, N., Ono, K., Onodera, H., Tagiri, A., Oka, S. et al. (2006) Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice. Plant J. 47: 969-976.
    • (2006) Plant J , vol.47 , pp. 969-976
    • Toki, S.1    Hara, N.2    Ono, K.3    Onodera, H.4    Tagiri, A.5    Oka, S.6
  • 41
    • 66249093890 scopus 로고    scopus 로고
    • High-frequency modification of plant genes using engineered zinc-finger nucleases
    • Townsend, J.A., Wright, D.A., Winfrey, R.J., Fu, F., Maeder, M.L., Joung, J.K. et al. (2009) High-frequency modification of plant genes using engineered zinc-finger nucleases. Nature 459: 442-445.
    • (2009) Nature , vol.459 , pp. 442-445
    • Townsend, J.A.1    Wright, D.A.2    Winfrey, R.J.3    Fu, F.4    Maeder, M.L.5    Joung, J.K.6
  • 42
    • 77956170068 scopus 로고    scopus 로고
    • Monitoring homologous recombination in rice (Oryza sativa L.)
    • Yang, Z., Tang, L., Li, M., Chen, L., Xu, J., Wu, G. et al. (2010) Monitoring homologous recombination in rice (Oryza sativa L.). Mutat. Res. 691: 55-63.
    • (2010) Mutat. Res , vol.691 , pp. 55-63
    • Yang, Z.1    Tang, L.2    Li, M.3    Chen, L.4    Xu, J.5    Wu, G.6
  • 43
    • 51549095956 scopus 로고    scopus 로고
    • Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends
    • Zhu, Z., Chung, W.H., Shim, E.Y., Lee, S.E. and Ira, G. (2008) Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends. Cell 134: 981-994.
    • (2008) Cell , vol.134 , pp. 981-994
    • Zhu, Z.1    Chung, W.H.2    Shim, E.Y.3    Lee, S.E.4    Ira, G.5
  • 44
    • 0034304056 scopus 로고    scopus 로고
    • An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants
    • Zuo, J.R., Niu, Q.W. and Chua, N.H. (2000) An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants. Plant J. 24: 265-273.
    • (2000) Plant J , vol.24 , pp. 265-273
    • Zuo, J.R.1    Niu, Q.W.2    Chua, N.H.3


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