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Volumn 118, Issue 24, 2012, Pages 6188-6198

Identification of polymorphisms in ultraconserved elements associated with clinical outcomes in locally advanced colorectal adenocarcinoma

Author keywords

colorectal cancer; recurrence; single nucleotide polymorphism; ultraconserved elements

Indexed keywords

FLUOROPYRIMIDINE DERIVATIVE;

EID: 84870671896     PISSN: 0008543X     EISSN: 10970142     Source Type: Journal    
DOI: 10.1002/cncr.27653     Document Type: Article
Times cited : (11)

References (33)
  • 1
    • 0036368245 scopus 로고    scopus 로고
    • Surgery of colorectal cancer: Surgical morbidity and 5- and ten-year results in 2400 patients-monoinstitutional experience
    • Staib L, Link KH, Blatz A, Beger HG,. Surgery of colorectal cancer: surgical morbidity and 5- and ten-year results in 2400 patients- monoinstitutional experience. World J Surg. 2002; 26: 59-66.
    • (2002) World J Surg. , vol.26 , pp. 59-66
    • Staib, L.1    Link, K.H.2    Blatz, A.3    Beger, H.G.4
  • 3
    • 46749158634 scopus 로고    scopus 로고
    • Management of colorectal cancer: A role for genetics in prevention and treatment?
    • Sengupta N, Gill KA, MacFie TS, et al. Management of colorectal cancer: a role for genetics in prevention and treatment? Pathol Res Pract. 2008; 204: 469-477.
    • (2008) Pathol Res Pract. , vol.204 , pp. 469-477
    • Sengupta, N.1    Gill, K.A.2    MacFie, T.S.3
  • 4
    • 0034927358 scopus 로고    scopus 로고
    • The genetic epidemiology of cancer: Interpreting family and twin studies and their implications for molecular genetic approaches
    • Risch N,. The genetic epidemiology of cancer: interpreting family and twin studies and their implications for molecular genetic approaches. Cancer Epidemiol Biomarkers Prev. 2001; 10: 733-741.
    • (2001) Cancer Epidemiol Biomarkers Prev. , vol.10 , pp. 733-741
    • Risch, N.1
  • 5
    • 85011939090 scopus 로고    scopus 로고
    • Ultraconserved elements: Genomics, function and disease
    • Baira E, Greshock J, Coukos G, Zhang L,. Ultraconserved elements: genomics, function and disease. RNA Biol. 2008; 5: 132-134.
    • (2008) RNA Biol. , vol.5 , pp. 132-134
    • Baira, E.1    Greshock, J.2    Coukos, G.3    Zhang, L.4
  • 6
    • 34548230885 scopus 로고    scopus 로고
    • Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas
    • Calin GA, Liu CG, Ferracin M, et al. Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas. Cancer Cell. 2007; 12: 215-229.
    • (2007) Cancer Cell. , vol.12 , pp. 215-229
    • Calin, G.A.1    Liu, C.G.2    Ferracin, M.3
  • 7
    • 33751316959 scopus 로고    scopus 로고
    • In vivo enhancer analysis of human conserved non-coding sequences
    • Pennacchio LA, Ahituv N, Moses AM, et al. In vivo enhancer analysis of human conserved non-coding sequences. Nature. 2006; 444: 499-502.
    • (2006) Nature. , vol.444 , pp. 499-502
    • Pennacchio, L.A.1    Ahituv, N.2    Moses, A.M.3
  • 8
    • 33947305594 scopus 로고    scopus 로고
    • Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay
    • Ni JZ, Grate L, Donohue JP, et al. Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay. Genes Dev. 2007; 21: 708-718.
    • (2007) Genes Dev. , vol.21 , pp. 708-718
    • Ni, J.Z.1    Grate, L.2    Donohue, J.P.3
  • 9
    • 33646070846 scopus 로고    scopus 로고
    • A bivalent chromatin structure marks key developmental genes in embryonic stem cells
    • Bernstein BE, Mikkelsen TS, Xie X, et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell. 2006; 125: 315-326.
    • (2006) Cell. , vol.125 , pp. 315-326
    • Bernstein, B.E.1    Mikkelsen, T.S.2    Xie, X.3
  • 10
    • 33744804277 scopus 로고    scopus 로고
    • The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator
    • Feng J, Bi C, Clark BS, Mady R, Shah P, Kohtz JD,. The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator. Genes Dev. 2006; 20: 1470-1484.
    • (2006) Genes Dev. , vol.20 , pp. 1470-1484
    • Feng, J.1    Bi, C.2    Clark, B.S.3    Mady, R.4    Shah, P.5    Kohtz, J.D.6
  • 11
    • 31744448843 scopus 로고    scopus 로고
    • Conserved noncoding sequences are selectively constrained and not mutation cold spots
    • Drake JA, Bird C, Nemesh J, et al. Conserved noncoding sequences are selectively constrained and not mutation cold spots. Nat Genet. 2006; 38: 223-227.
    • (2006) Nat Genet. , vol.38 , pp. 223-227
    • Drake, J.A.1    Bird, C.2    Nemesh, J.3
  • 12
    • 34548131708 scopus 로고    scopus 로고
    • Human genome ultraconserved elements are ultraselected
    • Katzman S, Kern AD, Bejerano G, et al. Human genome ultraconserved elements are ultraselected. Science. 2007; 317: 915.
    • (2007) Science. , vol.317 , pp. 915
    • Katzman, S.1    Kern, A.D.2    Bejerano, G.3
  • 13
    • 40549096716 scopus 로고    scopus 로고
    • SNPs in ultraconserved elements and familial breast cancer risk
    • Yang R, Frank B, Hemminki K, et al. SNPs in ultraconserved elements and familial breast cancer risk. Carcinogenesis. 2008; 29: 351-355.
    • (2008) Carcinogenesis. , vol.29 , pp. 351-355
    • Yang, R.1    Frank, B.2    Hemminki, K.3
  • 14
    • 2542542256 scopus 로고    scopus 로고
    • Ultraconserved elements in the human genome
    • Bejerano G, Pheasant M, Makunin I, et al. Ultraconserved elements in the human genome. Science. 2004; 304: 1321-1325.
    • (2004) Science. , vol.304 , pp. 1321-1325
    • Bejerano, G.1    Pheasant, M.2    Makunin, I.3
  • 15
    • 58149179992 scopus 로고    scopus 로고
    • UCbase & miRfunc: A database of ultraconserved sequences and microRNA function
    • (database issue).
    • Taccioli C, Fabbri E, Visone R, et al. UCbase & miRfunc: a database of ultraconserved sequences and microRNA function. Nucleic Acids Res. 2009; 37 (database issue): D41-D48.
    • (2009) Nucleic Acids Res. , vol.37
    • Taccioli, C.1    Fabbri, E.2    Visone, R.3
  • 16
    • 0142084743 scopus 로고    scopus 로고
    • Scanning human gene deserts for long-range enhancers [serial online]
    • Nobrega MA, Ovcharenko I, Afzal V, Rubin EM,. Scanning human gene deserts for long-range enhancers [serial online]. Science. 2003; 302: 413.
    • (2003) Science. , vol.302 , pp. 413
    • Nobrega, M.A.1    Ovcharenko, I.2    Afzal, V.3    Rubin, E.M.4
  • 17
    • 77951891107 scopus 로고    scopus 로고
    • Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements [serial online]
    • Licastro D, Gennarino VA, Petrera F, Sanges R, Banfi S, Stupka E,. Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements [serial online]. BMC Genomics. 2010; 11: 151.
    • (2010) BMC Genomics. , vol.11 , pp. 151
    • Licastro, D.1    Gennarino, V.A.2    Petrera, F.3    Sanges, R.4    Banfi, S.5    Stupka, E.6
  • 18
    • 38649123306 scopus 로고    scopus 로고
    • Ultraconservation identifies a small subset of extremely constrained developmental enhancers
    • Visel A, Prabhakar S, Akiyama JA, et al. Ultraconservation identifies a small subset of extremely constrained developmental enhancers. Nat Genet. 2008; 40: 158-160.
    • (2008) Nat Genet. , vol.40 , pp. 158-160
    • Visel, A.1    Prabhakar, S.2    Akiyama, J.A.3
  • 19
    • 77949267134 scopus 로고    scopus 로고
    • The structure of the catalytic subunit FANCL of the Fanconi anemia core complex
    • Cole AR, Lewis LP, Walden H,. The structure of the catalytic subunit FANCL of the Fanconi anemia core complex. Nat Struct Mol Biol. 2010; 17: 294-298.
    • (2010) Nat Struct Mol Biol. , vol.17 , pp. 294-298
    • Cole, A.R.1    Lewis, L.P.2    Walden, H.3
  • 20
    • 0141484612 scopus 로고    scopus 로고
    • A novel ubiquitin ligase is deficient in Fanconi anemia
    • Meetei AR, de Winter JP, Medhurst AL, et al. A novel ubiquitin ligase is deficient in Fanconi anemia. Nat Genet. 2003; 35: 165-170.
    • (2003) Nat Genet. , vol.35 , pp. 165-170
    • Meetei, A.R.1    De Winter, J.P.2    Medhurst, A.L.3
  • 21
    • 34548759123 scopus 로고    scopus 로고
    • Emergence of a DNA-damage response network consisting of Fanconi anaemia and BRCA proteins
    • Wang W,. Emergence of a DNA-damage response network consisting of Fanconi anaemia and BRCA proteins. Nat Rev Genet. 2007; 8: 735-748.
    • (2007) Nat Rev Genet. , vol.8 , pp. 735-748
    • Wang, W.1
  • 22
    • 77951826151 scopus 로고    scopus 로고
    • FAVL elevation in human tumors disrupts Fanconi anemia pathway signaling and promotes genomic instability and tumor growth
    • Zhang J, Zhao D, Park HK, et al. FAVL elevation in human tumors disrupts Fanconi anemia pathway signaling and promotes genomic instability and tumor growth. J Clin Invest. 2010; 120: 1524-1534.
    • (2010) J Clin Invest. , vol.120 , pp. 1524-1534
    • Zhang, J.1    Zhao, D.2    Park, H.K.3
  • 23
    • 30144439816 scopus 로고    scopus 로고
    • Disruption of the Fanconi anemia/BRCA pathway in sporadic cancer
    • Lyakhovich A, Surralles J,. Disruption of the Fanconi anemia/BRCA pathway in sporadic cancer. Cancer Lett. 2006; 232: 99-106.
    • (2006) Cancer Lett. , vol.232 , pp. 99-106
    • Lyakhovich, A.1    Surralles, J.2
  • 24
    • 77958030867 scopus 로고    scopus 로고
    • Rapamycin regulates stearoyl CoA desaturase 1 expression in breast cancer
    • Luyimbazi D, Akcakanat A, McAuliffe PF, et al. Rapamycin regulates stearoyl CoA desaturase 1 expression in breast cancer. Mol Cancer Ther. 2010; 9: 2770-2784.
    • (2010) Mol Cancer Ther. , vol.9 , pp. 2770-2784
    • Luyimbazi, D.1    Akcakanat, A.2    McAuliffe, P.F.3
  • 25
    • 70350741509 scopus 로고    scopus 로고
    • Parallel genotyping of 10,204 single nucleotide polymorphisms to screen for susceptible genes for IgA nephropathy
    • Woo KT, Lau YK, Wong KS, Zhao Y, Chan CM,. Parallel genotyping of 10,204 single nucleotide polymorphisms to screen for susceptible genes for IgA nephropathy. Ann Acad Med Singapore. 2009; 38: 894-899.
    • (2009) Ann Acad Med Singapore. , vol.38 , pp. 894-899
    • Woo, K.T.1    Lau, Y.K.2    Wong, K.S.3    Zhao, Y.4    Chan, C.M.5
  • 26
    • 34347239326 scopus 로고    scopus 로고
    • A genomewide screen for late-onset Alzheimer disease in a genetically isolated Dutch population
    • Liu F, Arias-Vasquez A, Sleegers K, et al. A genomewide screen for late-onset Alzheimer disease in a genetically isolated Dutch population. Am J Hum Genet. 2007; 81: 17-31.
    • (2007) Am J Hum Genet. , vol.81 , pp. 17-31
    • Liu, F.1    Arias-Vasquez, A.2    Sleegers, K.3
  • 28
    • 2542563257 scopus 로고    scopus 로고
    • Pooled analysis of fluorouracil-based adjuvant therapy for stage II and III colon cancer: Who benefits and by how much?
    • Gill S, Loprinzi CL, Sargent DJ, et al. Pooled analysis of fluorouracil-based adjuvant therapy for stage II and III colon cancer: who benefits and by how much? J Clin Oncol. 2004; 22: 1797-1806.
    • (2004) J Clin Oncol. , vol.22 , pp. 1797-1806
    • Gill, S.1    Loprinzi, C.L.2    Sargent, D.J.3
  • 29
    • 73849134426 scopus 로고    scopus 로고
    • Emerging roles of the EBF family of transcription factors in tumor suppression
    • Liao D,. Emerging roles of the EBF family of transcription factors in tumor suppression. Mol Cancer Res. 2009; 7: 1893-1901.
    • (2009) Mol Cancer Res. , vol.7 , pp. 1893-1901
    • Liao, D.1
  • 30
    • 34147224008 scopus 로고    scopus 로고
    • Genome-wide analysis of genetic alterations in acute lymphoblastic leukaemia
    • Mullighan CG, Goorha S, Radtke I, et al. Genome-wide analysis of genetic alterations in acute lymphoblastic leukaemia. Nature. 2007; 446: 758-764.
    • (2007) Nature. , vol.446 , pp. 758-764
    • Mullighan, C.G.1    Goorha, S.2    Radtke, I.3
  • 31
    • 52949127312 scopus 로고    scopus 로고
    • An integrated genomic analysis of human glioblastoma multiforme
    • Parsons DW, Jones S, Zhang X, et al. An integrated genomic analysis of human glioblastoma multiforme. Science. 2008; 321: 1807-1812.
    • (2008) Science. , vol.321 , pp. 1807-1812
    • Parsons, D.W.1    Jones, S.2    Zhang, X.3
  • 32
    • 52149123619 scopus 로고    scopus 로고
    • Core signaling pathways in human pancreatic cancers revealed by global genomic analyses
    • Jones S, Zhang X, Parsons DW, et al. Core signaling pathways in human pancreatic cancers revealed by global genomic analyses. Science. 2008; 321: 1801-1806.
    • (2008) Science. , vol.321 , pp. 1801-1806
    • Jones, S.1    Zhang, X.2    Parsons, D.W.3
  • 33
    • 69349092973 scopus 로고    scopus 로고
    • Profiling of chemonaive osteosarcoma and paired-normal cells identifies EBF2 as a mediator of osteoprotegerin inhibition to tumor necrosis factor-related apoptosis-inducing ligand-induced apoptosis
    • Patino-Garcia A, Zalacain M, Folio C, et al. Profiling of chemonaive osteosarcoma and paired-normal cells identifies EBF2 as a mediator of osteoprotegerin inhibition to tumor necrosis factor-related apoptosis-inducing ligand-induced apoptosis. Clin Cancer Res. 2009; 15: 5082-5091.
    • (2009) Clin Cancer Res. , vol.15 , pp. 5082-5091
    • Patino-Garcia, A.1    Zalacain, M.2    Folio, C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.