-
1
-
-
0037425570
-
G-quadruplex formation of thrombin-binding aptamer detected by electrospray ionization mass spectrometry
-
M. Vairamani, and M.L. Gross G-quadruplex formation of thrombin-binding aptamer detected by electrospray ionization mass spectrometry Journal of the American Chemical Society 125 2003 42 43
-
(2003)
Journal of the American Chemical Society
, vol.125
, pp. 42-43
-
-
Vairamani, M.1
Gross, M.L.2
-
3
-
-
0026575221
-
Selection of single-stranded DNA molecules that bind and inhibit human thrombin
-
L.C. Bock, L.C. Griffin, J.A. Latham, E.H. Vermaas, and J.J. Toole Selection of single-stranded DNA molecules that bind and inhibit human thrombin Nature 355 1992 564 566
-
(1992)
Nature
, vol.355
, pp. 564-566
-
-
Bock, L.C.1
Griffin, L.C.2
Latham, J.A.3
Vermaas, E.H.4
Toole, J.J.5
-
4
-
-
0027467617
-
Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution
-
R.F. Macaya, P. Schultze, F.W. Smith, J.A. Roe, and J. Feigon Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution Proceedings of the National Academy of Sciences of the United States of America 90 1993 3745 3749
-
(1993)
Proceedings of the National Academy of Sciences of the United States of America
, vol.90
, pp. 3745-3749
-
-
MacAya, R.F.1
Schultze, P.2
Smith, F.W.3
Roe, J.A.4
Feigon, J.5
-
5
-
-
0027537022
-
A DNA aptamer which binds to and inhibits thrombin exhibits a new structural motif for DNA
-
K.Y. Wang, S. McCurdy, R.G. Shea, S. Swaminathan, and P.H. Bolton A DNA aptamer which binds to and inhibits thrombin exhibits a new structural motif for DNA Biochemistry 32 1993 1899 1904
-
(1993)
Biochemistry
, vol.32
, pp. 1899-1904
-
-
Wang, K.Y.1
McCurdy, S.2
Shea, R.G.3
Swaminathan, S.4
Bolton, P.H.5
-
6
-
-
0027172294
-
The structure of alpha-thrombin inhibited by a 15-mer single-stranded DNA aptamer
-
K. Padmanabhan, K.P. Padmanabhan, J.D. Ferrara, J.E. Sadler, and A. Tulinsky The structure of alpha-thrombin inhibited by a 15-mer single-stranded DNA aptamer Journal of Biological Chemistry 268 1993 17651 17654
-
(1993)
Journal of Biological Chemistry
, vol.268
, pp. 17651-17654
-
-
Padmanabhan, K.1
Padmanabhan, K.P.2
Ferrara, J.D.3
Sadler, J.E.4
Tulinsky, A.5
-
7
-
-
0028318093
-
Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG)
-
P. Schultze, R.F. Macaya, and J. Feigon Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG) Journal of Molecular Biology 235 1994 1532 1547
-
(1994)
Journal of Molecular Biology
, vol.235
, pp. 1532-1547
-
-
Schultze, P.1
MacAya, R.F.2
Feigon, J.3
-
8
-
-
0029980523
-
Reconciliation of the X-ray and NMR structures of the thrombin-binding aptamer d(GGTTGGTGTGGTTGG)
-
J.A. Kelly, J. Feigon, and T.O. Yeates Reconciliation of the X-ray and NMR structures of the thrombin-binding aptamer d(GGTTGGTGTGGTTGG) Journal of Molecular Biology 256 1996 417 422
-
(1996)
Journal of Molecular Biology
, vol.256
, pp. 417-422
-
-
Kelly, J.A.1
Feigon, J.2
Yeates, T.O.3
-
9
-
-
0030064793
-
An ambiguous structure of a DNA 15-mer thrombin complex
-
K. Padmanabhan, and A. Tulinsky An ambiguous structure of a DNA 15-mer thrombin complex Acta Crystallographica D52 1996 272 282
-
(1996)
Acta Crystallographica
, vol.52 D
, pp. 272-282
-
-
Padmanabhan, K.1
Tulinsky, A.2
-
10
-
-
0033528756
-
Determinants of DNA quadruplex structural type:sequence and potassium binding
-
V.M. Marathias, and P.H. Bolton Determinants of DNA quadruplex structural type:sequence and potassium binding Biochemistry 38 1999 4355 4364
-
(1999)
Biochemistry
, vol.38
, pp. 4355-4364
-
-
Marathias, V.M.1
Bolton, P.H.2
-
11
-
-
0034194110
-
Structures of the potassium-saturated, 2:1, and intermediate, 1:1, forms of a quadruplex DNA
-
V.M. Marathias, and P.H. Bolton Structures of the potassium-saturated, 2:1, and intermediate, 1:1, forms of a quadruplex DNA Nucleic Acids Research 28 2000 1969 1977
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 1969-1977
-
-
Marathias, V.M.1
Bolton, P.H.2
-
14
-
-
84870535712
-
High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity
-
I.R. Krauss, A. Merlino, A. Randazzo, E. Novellino, L. Mazzarella, and F. Sica High-resolution structures of two complexes between thrombin and thrombin-binding aptamer shed light on the role of cations in the aptamer inhibitory activity Nucleic Acids Research 40 2012 8119 8128
-
(2012)
Nucleic Acids Research
, vol.40
, pp. 8119-8128
-
-
Krauss, I.R.1
Merlino, A.2
Randazzo, A.3
Novellino, E.4
Mazzarella, L.5
Sica, F.6
-
15
-
-
68949139305
-
Applications of isothermal titration calorimetry in biophysical studies of G-quadruplexes
-
B. Pagano, C.A. Mattia, and C. Giancola Applications of isothermal titration calorimetry in biophysical studies of G-quadruplexes International Journal of Molecular Sciences 10 2009 2935 2957
-
(2009)
International Journal of Molecular Sciences
, vol.10
, pp. 2935-2957
-
-
Pagano, B.1
Mattia, C.A.2
Giancola, C.3
-
16
-
-
0034635342
-
Lead is unusually effective in sequence-specific folding of DNA
-
I. Smirnov, and R.H. Shafer Lead is unusually effective in sequence-specific folding of DNA Journal of Molecular Biology 296 2000 1 5
-
(2000)
Journal of Molecular Biology
, vol.296
, pp. 1-5
-
-
Smirnov, I.1
Shafer, R.H.2
-
17
-
-
33747012167
-
Characterization of an unusual folding pattern in a catalytically active guanine quadruplex structure
-
P.R. Majhi, and R.H. Shafer Characterization of an unusual folding pattern in a catalytically active guanine quadruplex structure Biopolymers 82 2006 558 569
-
(2006)
Biopolymers
, vol.82
, pp. 558-569
-
-
Majhi, P.R.1
Shafer, R.H.2
-
18
-
-
2942590644
-
Quadruplex to Watson Crick duplex transition of the thrombin binding aptamer:A fluorescence resonance energy transfer study
-
N. Kumar, and S. Maiti Quadruplex to Watson Crick duplex transition of the thrombin binding aptamer:a fluorescence resonance energy transfer study Biochemical and Biophysical Research Communications 319 2004 759 767
-
(2004)
Biochemical and Biophysical Research Communications
, vol.319
, pp. 759-767
-
-
Kumar, N.1
Maiti, S.2
-
19
-
-
47849126383
-
Ligands playing musical chairs with G-quadruplex DNA: A rapid and simple displacement assay for identifying selective G-quadruplex binders
-
D. Monchaud, C. Allain, H. Bertrand, N. Smargiasso, F. Rosu, V. Gabelica, A. De Cian, J.-L. Mergny, and M.-P. Teulade-Fichou Ligands playing musical chairs with G-quadruplex DNA: a rapid and simple displacement assay for identifying selective G-quadruplex binders Biochimie 90 2008 1207 1223
-
(2008)
Biochimie
, vol.90
, pp. 1207-1223
-
-
Monchaud, D.1
Allain, C.2
Bertrand, H.3
Smargiasso, N.4
Rosu, F.5
Gabelica, V.6
De Cian, A.7
Mergny, J.-L.8
Teulade-Fichou, M.-P.9
-
21
-
-
64049092350
-
The influence of cisplatin on the gas-phase dissociation of oligonucleotides studied by electrospray ionization tandem mass spectrometry
-
A. Nyakas, M. Eymann, and S. Schürch The influence of cisplatin on the gas-phase dissociation of oligonucleotides studied by electrospray ionization tandem mass spectrometry Journal of the American Society for Mass Spectrometry 20 2009 792 804
-
(2009)
Journal of the American Society for Mass Spectrometry
, vol.20
, pp. 792-804
-
-
Nyakas, A.1
Eymann, M.2
Schürch, S.3
-
22
-
-
77953912902
-
Mass spectrometric studies of alkali metal ion binding on thrombin-binding aptamer DNA
-
E.S. Hong, H.-J. Yoon, B. Kim, Y.-H. Yim, H.-Y. So, and S.K. Shin Mass spectrometric studies of alkali metal ion binding on thrombin-binding aptamer DNA Journal of the American Society for Mass Spectrometry 21 2010 1245 1255
-
(2010)
Journal of the American Society for Mass Spectrometry
, vol.21
, pp. 1245-1255
-
-
Hong, E.S.1
Yoon, H.-J.2
Kim, B.3
Yim, Y.-H.4
So, H.-Y.5
Shin, S.K.6
-
24
-
-
70350676382
-
Cation localization and movement within DNA thrombin binding aptamer in solution
-
M. Trajkovski, P. Šket, and J. Plavec Cation localization and movement within DNA thrombin binding aptamer in solution Organic and Biomolecular Chemistry 7 2009 4677 4684
-
(2009)
Organic and Biomolecular Chemistry
, vol.7
, pp. 4677-4684
-
-
Trajkovski, M.1
Šket, P.2
Plavec, J.3
-
26
-
-
0032532125
-
Direct determination of solution binding constants for noncovalent complexes between bacterial cell wall peptide analogues and vancomycin group antibiotics by electrospray ionization mass spectrometry
-
T.J.D. Jorgensen, and P. Roepstorff Direct determination of solution binding constants for noncovalent complexes between bacterial cell wall peptide analogues and vancomycin group antibiotics by electrospray ionization mass spectrometry Analytical Chemistry 70 1998 4427 4432
-
(1998)
Analytical Chemistry
, vol.70
, pp. 4427-4432
-
-
Jorgensen, T.J.D.1
Roepstorff, P.2
-
27
-
-
0141958921
-
Influence of solution and gas phase processes on protein-carbohydrate binding affinities determined by nanoelectrospray Fourier-transform ion cyclotron resonance mass spectrometry
-
W. Wang, E.N. Kitova, and J.S. Klassen Influence of solution and gas phase processes on protein-carbohydrate binding affinities determined by nanoelectrospray Fourier-transform ion cyclotron resonance mass spectrometry Analytical Chemistry 75 2003 4945 4955
-
(2003)
Analytical Chemistry
, vol.75
, pp. 4945-4955
-
-
Wang, W.1
Kitova, E.N.2
Klassen, J.S.3
-
28
-
-
33846478810
-
Electrostatics dominate quadruplex stability
-
I.V. Smirnov, and R.H. Shafer Electrostatics dominate quadruplex stability Biopolymers 85 2006 91 1101
-
(2006)
Biopolymers
, vol.85
, pp. 91-1101
-
-
Smirnov, I.V.1
Shafer, R.H.2
-
30
-
-
37049070010
-
Thermodynamics of the solvation of ions 5: Gibbs free energy of hydration at 298.15 K
-
Y.J. Marcus Thermodynamics of the solvation of ions 5: Gibbs free energy of hydration at 298.15 K Journal of the Chemical Society - Faraday Transactions 87 1991 2995 2999
-
(1991)
Journal of the Chemical Society - Faraday Transactions
, vol.87
, pp. 2995-2999
-
-
Marcus, Y.J.1
-
32
-
-
0000592213
-
Molecular recognition. Selective ammonium cryptates of synthetic receptor molecules possessing a tetrahedral recognition site
-
E. Graf, J.P. Kintzinger, J.M. Lehn, and J. LeMoigne Molecular recognition. Selective ammonium cryptates of synthetic receptor molecules possessing a tetrahedral recognition site Journal of the American Chemical Society 104 1982 1672 1678
-
(1982)
Journal of the American Chemical Society
, vol.104
, pp. 1672-1678
-
-
Graf, E.1
Kintzinger, J.P.2
Lehn, J.M.3
Lemoigne, J.4
-
33
-
-
0032126691
-
Ammonium ion as an NMR probe for monovalent cation coordination sites of DNA quadruplexes
-
N.V. Hud, P. Schultze, and J. Feigon Ammonium ion as an NMR probe for monovalent cation coordination sites of DNA quadruplexes Journal of the American Chemical Society 120 1998 6403 6404
-
(1998)
Journal of the American Chemical Society
, vol.120
, pp. 6403-6404
-
-
Hud, N.V.1
Schultze, P.2
Feigon, J.3
-
34
-
-
0242490597
-
Selective binding of monovalent cations to the stacking G-quartet structure formed by guanosine 5′-monophosphates: A solid-state NMR study
-
A. Wong, and G. Wu Selective binding of monovalent cations to the stacking G-quartet structure formed by guanosine 5′-monophosphates: a solid-state NMR study Journal of the American Chemical Society 125 2003 13895 13905
-
(2003)
Journal of the American Chemical Society
, vol.125
, pp. 13895-13905
-
-
Wong, A.1
Wu, G.2
-
35
-
-
33745630653
-
Factors governing the metal coordination number in isolated group IA and IIA metal hydrates
-
I. Turnell, and C. Lim Factors governing the metal coordination number in isolated group IA and IIA metal hydrates Inorganic Chemistry 45 2006 4811 4819
-
(2006)
Inorganic Chemistry
, vol.45
, pp. 4811-4819
-
-
Turnell, I.1
Lim, C.2
|