메뉴 건너뛰기




Volumn 5, Issue , 2012, Pages

Adipose Co-expression networks across Finns and Mexicans identify novel triglyceride-associated genes

Author keywords

Adipose tissue; Finns; Mexicans; RNA sequencing; Triglycerides; Weighted gene co expression network analysis

Indexed keywords

CHEMOKINE RECEPTOR CCR1; CXCL16 CHEMOKINE; TRIACYLGLYCEROL;

EID: 84870461579     PISSN: None     EISSN: 17558794     Source Type: Journal    
DOI: 10.1186/1755-8794-5-61     Document Type: Article
Times cited : (32)

References (32)
  • 3
    • 31744449136 scopus 로고    scopus 로고
    • The sex-specific genetic architecture of quantitative traits in humans
    • DOI 10.1038/ng1726, PII NG1726
    • The sex-specific genetic architecture of quantitative traits in humans. Weiss LA, Pan L, Abney M, Ober C, Nat Genet 2006 38 218 222 10.1038/ng1726 16429159 (Pubitemid 43177237)
    • (2006) Nature Genetics , vol.38 , Issue.2 , pp. 218-222
    • Weiss, L.A.1    Pan, L.2    Abney, M.3    Ober, C.4
  • 5
    • 0015858194 scopus 로고
    • Hereditary diseases in Finland; Rare flora in rare soul
    • 4748753
    • Hereditary diseases in Finland; rare flora in rare soul. Norio R, Nevanlinna HR, Perheentupa J, Ann Clin Res 1973 5 101 141 4748753
    • (1973) Ann Clin Res , vol.5 , pp. 101-141
    • Norio, R.1    Nevanlinna, H.R.2    Perheentupa, J.3
  • 6
    • 77249132284 scopus 로고    scopus 로고
    • Adipose tissue inflammation in obesity and metabolic syndrome
    • 19788868
    • Adipose tissue inflammation in obesity and metabolic syndrome. Nishimura S, Manabe I, Nagai R, Discov Med 2009 8 55 60 19788868
    • (2009) Discov Med , vol.8 , pp. 55-60
    • Nishimura, S.1    Manabe, I.2    Nagai, R.3
  • 11
    • 40049099114 scopus 로고    scopus 로고
    • Defining clusters from a hierarchical cluster tree: The Dynamic Tree Cut package for R
    • DOI 10.1093/bioinformatics/btm563
    • Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. Langfelder P, Zhang B, Horvath S, Bioinformatics 2008 24 719 720 10.1093/bioinformatics/btm563 18024473 (Pubitemid 351321220)
    • (2008) Bioinformatics , vol.24 , Issue.5 , pp. 719-720
    • Langfelder, P.1    Zhang, B.2    Horvath, S.3
  • 12
    • 60549111634 scopus 로고    scopus 로고
    • WGCNA: An R package for weighted correlation network analysis
    • 10.1186/1471-2105-9-559 19114008
    • WGCNA: an R package for weighted correlation network analysis. Langfelder P, Horvath S, BMC Bioinformatics 2008 9 559 10.1186/1471-2105-9-559 19114008
    • (2008) BMC Bioinformatics , vol.9 , pp. 559
    • Langfelder, P.1    Horvath, S.2
  • 16
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources
    • Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. Huang DW, Sherman BT, Lempicki RA, Nature Protoc 2009 4 44 57
    • (2009) Nature Protoc , vol.4 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 17
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: Paths toward the Comprehensive functional analysis of large gene lists
    • 10.1093/nar/gkn923 19033363
    • Bioinformatics enrichment tools: paths toward the Comprehensive functional analysis of large gene lists. Huang DW, Sherman BT, Lempicki RA, Nucleic Acids Res 2009 37 1 13 10.1093/nar/gkn923 19033363
    • (2009) Nucleic Acids Res , vol.37 , pp. 1-13
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 23
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • 10.1093/bioinformatics/btp120 19289445
    • TopHat: discovering splice junctions with RNA-Seq. Trapnell C, Pachter L, Salzberg SL, Bioinformatics 2009 25 1105 1111 10.1093/bioinformatics/btp120 19289445
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 24
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • 10.1186/gb-2009-10-3-r25 19261174
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Langmead B, Trapnell C, Pop M, Salzberg SL, Genome Biol 2009 10 25 10.1186/gb-2009-10-3-r25 19261174
    • (2009) Genome Biol , vol.10 , pp. 1825
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 25
    • 77952123055 scopus 로고    scopus 로고
    • Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
    • 10.1038/nbt.1621 20436464
    • Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L, Nat Biotechnol 2010 28 511 515 10.1038/nbt.1621 20436464
    • (2010) Nat Biotechnol , vol.28 , pp. 511-515
    • Trapnell, C.1    Williams, B.A.2    Pertea, G.3    Mortazavi, A.4    Kwan, G.5    Van Baren, M.J.6    Salzberg, S.L.7    Wold, B.J.8    Pachter, L.9
  • 26
    • 79952709611 scopus 로고    scopus 로고
    • Improving RNA-Seq expression estimates by correcting for fragment bias
    • 10.1186/gb-2011-12-3-r22 21410973
    • Improving RNA-Seq expression estimates by correcting for fragment bias. Roberts A, Trapnell C, Donaghey J, Rinn JL, Pachter L, Genome Biol 2011 12 22 10.1186/gb-2011-12-3-r22 21410973
    • (2011) Genome Biol , vol.12 , pp. 1822
    • Roberts, A.1    Trapnell, C.2    Donaghey, J.3    Rinn, J.L.4    Pachter, L.5
  • 27
    • 80051941094 scopus 로고    scopus 로고
    • Identification of novel transcripts in annotated genomes using RNA-Seq
    • 10.1093/bioinformatics/btr355 21697122
    • Identification of novel transcripts in annotated genomes using RNA-Seq. Roberts A, Pimentel H, Trapnell C, Pachter L, Bioinformatics 2011 27 2325 2329 10.1093/bioinformatics/btr355 21697122
    • (2011) Bioinformatics , vol.27 , pp. 2325-2329
    • Roberts, A.1    Pimentel, H.2    Trapnell, C.3    Pachter, L.4
  • 28
    • 23944458138 scopus 로고    scopus 로고
    • General framework for weighted gene co-expression network analysis
    • General Framework for Weighted Gene Co-Expression Network Analysis. Zhang B, Horvath S, Stat Appl Genet Mol Biol 2005 4 17
    • (2005) Stat Appl Genet Mol Biol , vol.4 , pp. 17
    • Zhang, B.1    Horvath, S.2
  • 29
    • 50949084896 scopus 로고    scopus 로고
    • Geometric interpretation of gene coexpression network analysis
    • 10.1371/journal.pcbi.1000117 18704157
    • Geometric Interpretation of Gene Coexpression Network Analysis. Horvath S, Dong J, PLoS Comput Biol 2008 4 1000117 10.1371/journal.pcbi.1000117 18704157
    • (2008) PLoS Comput Biol , vol.4 , pp. 51000117
    • Horvath, S.1    Dong, J.2
  • 30
    • 79551545346 scopus 로고    scopus 로고
    • Is my network module preserved and reproducible?
    • 10.1371/journal.pcbi.1001057
    • Is my network module preserved and reproducible? Langfelder P, Luo R, Oldham MC, Horvath S, PloS Comp Biol 2011 7 1001057 10.1371/journal.pcbi.1001057
    • (2011) PloS Comp Biol , vol.7 , pp. 51001057
    • Langfelder, P.1    Luo, R.2    Oldham, M.C.3    Horvath, S.4
  • 32
    • 85027956925 scopus 로고    scopus 로고
    • Triglycerides and cardiovascular disease: A scientific statement from the American Heart Association
    • American Heart Association Clinical Lipidology, Thrombosis, and Prevention Committee of the Council on Nutrition, Physical Activity, and Metabolism; Council on Arteriosclerosis, Thrombosis and Vascular Biology; Council on Cardiovascular Nursing; Council on the Kidney in Cardiovascular Disease 10.1161/CIR.0b013e3182160726 21502576
    • Triglycerides and cardiovascular disease: a scientific statement from the American Heart Association. Miller M, Stone NJ, Ballantyne C, Bittner V, Criqui MH, Ginsberg HN, Goldberg AC, Howard WJ, Jacobson MS, Kris-Etherton PM, Lennie TA, Levi M, Mazzone T, Pennathur S, American Heart Association Clinical Lipidology, Thrombosis, and Prevention Committee of the Council on Nutrition, Physical Activity, and Metabolism; Council on Arteriosclerosis, Thrombosis and Vascular Biology; Council on Cardiovascular Nursing; Council on the Kidney in Cardiovascular Disease, Circulation 2011 123 2292 2333 10.1161/CIR. 0b013e3182160726 21502576
    • (2011) Circulation , vol.123 , pp. 2292-2333
    • Miller, M.1    Stone, N.J.2    Ballantyne, C.3    Bittner, V.4    Criqui, M.H.5    Ginsberg, H.N.6    Goldberg, A.C.7    Howard, W.J.8    Jacobson, M.S.9    Kris-Etherton, P.M.10    Lennie, T.A.11    Levi, M.12    Mazzone, T.13    Pennathur, S.14


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.