Application of loop-mediated isothermal amplification for malaria diagnosis during a follow-up study in São Tomé

Malaria Journal

Volumn 11, Issue , 2012, Pages

  Lee, Pei Wen ^a   Ji, Dar Der ^b,e   Liu, Chia Tai ^a   Rampao, Herodes S ^c   Do Rosario, Virgilio E ^d   Lin, I Feng ^e   Shaio, Men Fang ^a,e  

^a Anti Malaria Team of Taiwan in São Tomé and Príncipe ^*  (Taiwan)

^b CENTER FOR DISEASE CONTROL   (Taiwan)

^c Centro National de Endemias São Tomé   (Taiwan)

^d INSTITUTO DE HIGIENE E MEDICINA TROPICAL   (Portugal)

^e NATIONAL YANG MING UNIVERSITY   (Taiwan)

Author keywords

Loop mediated isothermal amplification; Malaria; Microscopy; Nested polymerase chain reaction; Rapid diagnostic test; Treatment follow up

Indexed keywords

AMODIAQUINE PLUS ARTESUNATE; ARTEMETHER PLUS BENFLUMETOL; HISTIDINE RICH PROTEIN 2; PROTEIN; UNCLASSIFIED DRUG;

ADOLESCENT; ARTICLE; CHILD; CONTROLLED STUDY; DIAGNOSTIC TEST; DIAGNOSTIC TEST ACCURACY STUDY; FOLLOW UP; HUMAN; INTERMETHOD COMPARISON; LOOP MEDIATED ISOTHERMAL AMPLIFICATION; MAJOR CLINICAL STUDY; MALARIA; MALARIA FALCIPARUM; MALARIA RAPID TEST; MICROSCOPY; NESTED POLYMERASE CHAIN REACTION; POINT OF CARE TESTING; POLYMERASE CHAIN REACTION; PREDICTIVE VALUE; PRESCHOOL CHILD; SCHOOL CHILD; SENSITIVITY AND SPECIFICITY; STANDARD; TEMPERATURE;

ADOLESCENT; ANTIMALARIALS; ATLANTIC ISLANDS; CHILD; CHILD, PRESCHOOL; DRUG MONITORING; FEMALE; HUMANS; MALARIA; MALE; MOLECULAR DIAGNOSTIC TECHNIQUES; NUCLEIC ACID AMPLIFICATION TECHNIQUES; SENSITIVITY AND SPECIFICITY;

EID: 84870415537     PISSN: None     EISSN: 14752875     Source Type: Journal    
DOI: 10.1186/1475-2875-11-408     Document Type: Article

References (44)

1. Pre-elimination of malaria on the island of Príncipe. Lee PW, Liu CT, Rampao HS, do Rosario VE, Shaio MF, Malar J 2010 9 26 10.1186/1475-2875-9-26 20089158
2. World Health Organization, World malaria report Geneva: World Health Organization 2011
3. Potential threat of malaria epidemics in a low transmission area, as exemplified by Sao Tome and Principe. Lee PW, Liu CT, do Rosario VE, de Sousa B, Rampao HS, Shaio MF, Malar J 2010 9 264 10.1186/1475-2875-9-264 20920216
4. Risk factors for gametocyte carriage in Gambian children. Von Seidlein L, Drakeley C, Greenwood B, Walraven G, Targett G, Am J Trop Med Hyg 2001 65 523 527 11716108 (Pubitemid 33134586)
5. Asymptomatic parasitaemia as a risk factor for symptomatic malaria in a cohort of Ugandan children. Njama-Meya D, Kamya MR, Dorsey G, Trop Med Int Health 2004 9 862 868 10.1111/j.1365-3156.2004.01277.x 15303990 (Pubitemid 39120143)
6. Plasmodium falciparum gametocyte carriage in asymptomatic children in western Kenya. Bousema JT, Gouagna LC, Drakeley CJ, Meutstege AM, Okech BA, Akim IN, Beier JC, Githure JI, Sauerwein RW, Malar J 2004 3 18 10.1186/1475-2875-3- 18 15202944 (Pubitemid 39319755)
7. The complexities of malaria disease manifestations with a focus on asymptomatic malaria. Laishram DD, Sutton PL, Nanda N, Sharma VL, Sobti RC, Carlton JM, Joshi H, Malar J 2012 11 1 29 10.1186/1475-2875-11-1 22212246
8. A sub-microscopic gametocyte reservoir can sustain malaria transmission. Karl S, Gurarie D, Zimmerman PA, King CH, St Pierre TG, Davis TME, PLoS One 2011 6 20805 10.1371/journal.pone.0020805 21695129
9. Working without a blindfold: the critical role of diagnostics in malaria control. Perkins MD, Bell DR, Malar J 2008 7 suppl 5 10.1186/1475-2875-7-S1-S5 19091039
10. The role of rapid diagnostic tests in managing malaria. Bisoffi Z, Gobbi F, Angheben A, den Ende JV, PLoS Med 2009 6 1000063 10.1371/journal.pmed.1000063 19399160
11. Accuracy of routine laboratory diagnosis of malaria in the United Kingdom. Milne LM, Kyi MS, Chiodini PL, Warhurst DC, J Clin Pathol 1994 47 740 742 10.1136/jcp.47.8.740 7962629
12. Laboratory diagnosis of malaria. Warhurst DC, Williams JE, J Clin Pathol 1996 49 533 538 10.1136/jcp.49.7.533 8813948 (Pubitemid 26232724)
13. Rapid diagnostic tests for malaria parasites. Moody A, Clin Microbiol Rev 2002 15 66 78 10.1128/CMR.15.1.66-78.2002 11781267 (Pubitemid 34052582)
14. PfHRP2 and PfLDH antigen detection for monitoring the efficacy of artemisinin-based combination therapy (ACT) in the treatment of uncomplicated falciparum malaria. Houze S, Boly MD, Le Bras J, Deloron P, Faucher JF, Malar J 2009 8 211 10.1186/1475-2875-8-211 19735557
15. Bayesian latent class models in malaria diagnosis. Goncalves L, Subtil A, de Oliveira R, do Rosario V, Lee PW, Shaio MF, PLoS One 2012 7 40633 10.1371/journal.pone.0040633 22844405
16. How useful is PCR in the diagnosis of malaria? Hänscheida T, Grobusch MP, Trends Parasitol 2002 18 395 398 10.1016/S1471-4922(02)02348-6 12377256
17. Sensitive and inexpensive molecular test for falciparum malaria: detecting Plasmodium falciparum DNA directly from heat-treated blood by loop-mediated isothermal amplification. Poon LL, Wong BW, Ma EH, Chan KH, Chow LM, Abeyewickreme W, Tangpukdee N, Yuen KY, Guan Y, Looareesuwan S, Peiris JS, Clin Chem 2006 52 303 306 16339303 (Pubitemid 43185494)
18. Detection of four Plasmodium species by genus- and species-specific loop-mediated isothermal amplification for clinical diagnosis. Han ET, Watanabe R, Sattabongkot J, Khuntirat B, Sirichaisinthop J, Iriko H, Jin L, Takeo S, Tsuboi T, J Clin Microbiol 2007 45 2521 2528 10.1128/JCM.02117-06 17567794 (Pubitemid 47295483)
19. Real-time fluorescence loop mediated isothermal amplification for the diagnosis of malaria. Lucchi NW, Demas A, Narayanan J, Sumari D, Kabanywanyi A, Kachur SP, Barnwell JW, Udhayakumar V, PLoS One 2010 5 13733 10.1371/journal.pone.0013733 21060829
20. Identification of the four human malaria parasite species in field samples by the polymerase chain reaction and detection of a high prevalence of mixed infections. Snounou G, Viriyakosol S, Jarra W, Thaithong S, Brown KN, Mol Biochem Parasitol 1993 58 283 292 10.1016/0166-6851(93)90050-8 8479452
21. Rapid DNA extraction from archive blood spots on filter paper for genotyping of Plasmodium falciparum. Bereczky S, Mårtensson A, Gil JP, Färnert A, Am J Trop Med Hyg 2005 72 249 251 15772315 (Pubitemid 41278870)
22. Development of loop-mediated isothermal amplification assay for detection of Entamoeba histolytica. Liang SY, Chan YH, Hsia KT, Lee JL, Kuo MC, Hwa KY, Chan CW, Chiang TY, Chen JS, Wu FT, Ji DD, J Clin Microbiol 2009 47 1892 1895 10.1128/JCM.00105-09 19321720
23. Loop-mediated isothermal PCR (LAMP) for the diagnosis of falciparum malaria. Paris DH, Imwong M, Faiz AM, Hasan M, Yunus EB, Silamut K, Lee SJ, Day NP, Dondorp AM, Am J Trop Med Hyg 2007 77 972 976 17984362 (Pubitemid 351837850)
24. A review of malaria diagnostic tools: microscopy and rapid diagnostic test (RDT). Wongsrichanalai C, Barcus MJ, Muth S, Sutamihardja A, Wernsdorfer WH, Am J Trop Med Hyg 2007 77 Suppl 6 119 127 18165483
25. The reliability of the microscopic diagnosis of malaria in the filed and in the laboratory. Collier JA, Longmore JM, Ann Trop Med Parasitol 1983 77 113 117 6192774 (Pubitemid 13101225)
26. Use and limitations of light microscopy for diagnosing malaria at the primary health care level. Payne D, Bull World Health Organ 1988 66 621 626 2463112 (Pubitemid 19022902)
27. Mitochondrial DNA targets increase sensitivity of malaria detection using loop-mediated isothermal amplification. Polley SD, Mori Y, Watson J, Perkins MD, Gonzalez IJ, Notomi T, Chiodini PL, Sutherland CJ, J Clin Microbiol 2010 48 2866 2871 10.1128/JCM.00355-10 20554824
28. Comparative diagnosis of malaria infections by microscopy nested PCR, and LAMP in northern Thailand. Poschl B, Waneesorn J, Thekisoe O, Chutipongvivate S, Karanis P, Am J Trop Med Hyg 2010 83 56 60 10.4269/ajtmh.2010.09-0630 20595478
29. Evaluation of loop mediated isothermal amplification (LAMP) for malaria diagnosis in a field setting. Sirichaisinthop J, Buates S, Watanabe R, Han ET, Suktawonjaroenpon W, Krasaesub S, Takeo S, Tsuboi T, Sattabongkot J, Am J Trop Med Hyg 2011 85 594 596 10.4269/ajtmh.2011.10-0676 21976556
30. Loop-mediated isothermal amplification (LAMP) for malarial parasites of humans: Would it come to clinical reality as a point-of-care test? Abdul-Ghani R, Al-Mekhlafi AM, Karanis P, Acta Trop 2012 122 233 240 10.1016/j.actatropica. 2012.02.004 22366670
31. Considerations on the use of nucleic acid-based amplification for malaria parasite detection. Proux S, Suwanarusk R, Barends M, Zwang J, Price RN, Leimanis M, Kiricharoen L, Laochan N, Russell B, Nosten F, Snounou G, Malar J 2011 10 323 10.1186/1475-2875-10-323 22034851
32. Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains a major inhibitor of polymerase chain reaction (PCR) amplification. Akane A, Matsubara K, Nakamura H, Takahashi S, Kimura K, J Forensic Sci 1994 39 362 372 8195750
33. Identification and characterization of immunoglobulin G in blood as a major inhibitor of diagnostic PCR. Abu Al-Soud W, Jönsson LJ, Rådstr MP, J Clin Microbiol 2000 38 345 350 10618113
34. Purification and characterization of PCR-inhibitory components in blood cells. Abu Al-Soud W, Rådstro MP, J Clin Microbiol 2001 39 485 493 10.1128/JCM.39.2.485-493.2001 11158094 (Pubitemid 32150805)
35. Update on rapid diagnostic testing for malaria. Murray CK, Gasser RA Jr, Magill AJ, Miller RS, Clin Microbiol Rev 2008 21 97 110 10.1128/CMR.00035-07 18202438 (Pubitemid 351160011)
36. Evaluation of rapid diagnostic tests: malaria. Bell D, Peeling RW, Nature Rev Microbiol 2006 4 suppl 34 38
37. World Health Organization, Methods of field trials of malaria rapid diagnostic tests Geneva: World Health Organization 2009
38. Estimation of the total parasite biomass in acute falciparum malaria from plasma PfHRP2. Dondorp AM, Desakorn V, Pongtavornpinyo W, Sahassananda D, Silamut K, Chotivanich K, Newton PN, Pitisuttithum P, Smithyman AM, White NJ, Day NPJ, PLoS Med 2005 2 204 10.1371/journal.pmed.0020204 16104831 (Pubitemid 46179250)
39. Diagnosing severe falciparum malaria in parasitaemic African children: a prospective evaluation of plasma PfHRP2 measurement. Hendriksen ICE, Mwanga-Amumpaire J, von Seidlein L, Mtove G, White LJ, Olaosebikan R, Lee SJ, Tshefu AK, Woodrow C, Amos B, Karema C, Saiwaew S, Maitland K, Gomes E, Pan-Ngum W, Gesase S, Silamut K, Reyburn H, Joseph S, Chotivanich K, Fanello CI, Day NPJ, White NJ, Dondorp AM, PLoS Med 2012 9 1001297 10.1371/journal.pmed.1001297 22927801
40. Ensuring quality and access for malaria diagnosis: how can it be achieved? Bell D, Wongsrichanalai C, Barnwell JW, Nature Rev Microbiol 2006 4 suppl 7 20
41. Laboratory demonstration of a prozone-like effect in HRP2-detecting malaria rapid diagnostic tests: implications for clinical management. Luchavez J, Baker J, Alcantara S, Alcantara S, Belizario V Jr, McCarthy JS, Bell D, Malar J 2011 10 286 10.1186/1475-2875-10-286 21957869
42. False-negative rapid diagnostic tests for malaria and deletion of the histidine-rich repeat region of the hrp2 gene. Koita OA, Doumbo OK, Ouattara A, Tall LK, Konare A, Diakite M, Diallo M, Sagara I, Masinde GL, Doumbo SN, Dolo A, Tounkara A, Traore I, Krogstad DJ, Am J Trop Med Hyg 2012 86 194 198 10.4269/ajtmh.2012.10-0665 22302847
43. Artesunate-amodiaquine combination therapy for falciparum malaria in young Gabonese children. Oyakhirome S, Potschke M, Schwarz NG, Dornemann J, Laengin M, Salazar CO, Lell B, Kun JF, Kremsner PG, Grobusch MP, Malar J 2007 6 29 10.1186/1475-2875-6-29 17352806 (Pubitemid 46474682)
44. Community screening and treatment of asymptomatic carriers of Plasmodium falciparum with artemether- lumefantrine to reduce malaria disease burden: a modeling and simulation analysis. Kern SE, Tiono AB, Makanga M, Gbadoe AD, Premji Z, Gaye O, Sagara I, Ubben D, Cousin M, Oladiran F, Sander O, Ogutu B, Malar J 2011 10 210 10.1186/1475-2875-10-210 21801345