A genome-wide 3C-method for characterizing the three-dimensional architectures of genomes

Methods

Volumn 58, Issue 3, 2012, Pages 277-288

  Duan, Zhijun ^a   Andronescu, Mirela ^a   Schutz, Kevin ^a   Lee, Choli ^a   Shendure, Jay ^a   Fields, Stanley ^a,b   Noble, William S ^a   Anthony Blau, C ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

^b HOWARD HUGHES MEDICAL INSTITUTE   (United States)

Author keywords

Chromatin; Chromosome; Chromosome conformation capture (3C); Chromosome conformation capture on chip (4C); Genome architecture; Three dimensional (3D) organization

Indexed keywords

FORMALDEHYDE; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE;

CHROMOSOME CONFORMATION CAPTURE ON CHIP; CROSS LINKING; FUNGAL GENOME; GENE INTERACTION; GENETIC PROCEDURES; GENOME ANALYSIS; GENOME WIDE CHROMOSOME CONFORMATION CAPTURE METHOD; HIGH THROUGHPUT SEQUENCING; KARYOTYPE; METHYLATION; MOLECULAR LIBRARY; NONHUMAN; PRIORITY JOURNAL; QUALITY CONTROL; REVIEW; SACCHAROMYCES CEREVISIAE; SPHEROPLAST; YEAST CELL;

ANIMALS; BIOTINYLATION; CHROMOSOME MAPPING; CROSS-LINKING REAGENTS; DNA CLEAVAGE; DNA RESTRICTION ENZYMES; DNA, CIRCULAR; DNA, FUNGAL; FORMALDEHYDE; GENE LIBRARY; GENOME, FUNGAL; HUMANS; NUCLEIC ACID CONFORMATION; ROC CURVE; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS, DNA;

EUKARYOTA;

EID: 84870331824     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2012.06.018     Document Type: Review

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