메뉴 건너뛰기




Volumn 40, Issue 6, 2012, Pages 1211-1216

Biogeochemistry and microbiology of microaerobic Fe(II) oxidation

Author keywords

Biogeochemistry; Gallionallaceae; Iron oxidizing bacterium; Microaerobic iron(II) oxidation; Zetaproteobacteria

Indexed keywords

FERROUS ION;

EID: 84870154302     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST20120154     Document Type: Conference Paper
Times cited : (40)

References (38)
  • 1
    • 33747790905 scopus 로고    scopus 로고
    • The oxygenation of the atmosphere and oceans
    • Holland, H.D. (2006) The oxygenation of the atmosphere and oceans. Philos. Trans. R. Soc. London Ser. B 361, 903-915
    • (2006) Philos. Trans. R. Soc. London Ser. B , vol.361 , pp. 903-915
    • Holland, H.D.1
  • 2
    • 0142156526 scopus 로고    scopus 로고
    • Iron and sulfide oxidation within the basaltic ocean crust: Implications for chemolithoautotrophic microbial biomass production
    • DOI 10.1016/S0016-7037(03)00304-1
    • Bach, W. and Edwards, K.J. (2003) Iron and sulfide oxidation within the basaltic ocean crust: implications for chemolithoautotrophic microbial biomass production. Geochim. Cosmochim. Acta 67, 3871-3887 (Pubitemid 37312329)
    • (2003) Geochimica et Cosmochimica Acta , vol.67 , Issue.20 , pp. 3871-3887
    • Bach, W.1    Edwards, K.J.2
  • 4
    • 33745339797 scopus 로고    scopus 로고
    • The potential significance of microbial Fe(III) reduction during deposition of Precambrian banded iron formations
    • DOI 10.1111/j.1472-4669.2005.00055.x
    • Konhauser, K.O., Newman, D.K. and Kappler, A. (2005) The potential significance of microbial Fe(III) reduction during deposition of Precambrian banded iron formations. Geobiology 3, 167-177 (Pubitemid 43942996)
    • (2005) Geobiology , vol.3 , Issue.3 , pp. 167-177
    • Konhauser, K.O.1    Newman, D.K.2    Kappler, A.3
  • 5
    • 77957937698 scopus 로고    scopus 로고
    • Iron-oxidizing bacteria: An environmental and genomic perspective
    • Emerson, D., Fleming, E.J. and McBeth, J.M. (2010) Iron-oxidizing bacteria: an environmental and genomic perspective. Annu. Rev. Microbiol. 64, 561-583
    • (2010) Annu. Rev. Microbiol. , vol.64 , pp. 561-583
    • Emerson, D.1    Fleming, E.J.2    McBeth, J.M.3
  • 6
    • 84900487381 scopus 로고    scopus 로고
    • The iron biogeochemical cycle past and present
    • Raiswell, R. and Canfield, D.E. (2011) The iron biogeochemical cycle past and present. Geochem. Perspect. 1, 1-232
    • (2011) Geochem. Perspect. , vol.1 , pp. 1-232
    • Raiswell, R.1    Canfield, D.E.2
  • 7
    • 70249096626 scopus 로고    scopus 로고
    • Oxygen for heavy metal fans
    • Lyons, T. and Reinhard, C.T. (2009) Oxygen for heavy metal fans. Nature 461, 179-181
    • (2009) Nature , vol.461 , pp. 179-181
    • Lyons, T.1    Reinhard, C.T.2
  • 8
    • 39849101191 scopus 로고    scopus 로고
    • A novel lineage of Proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities
    • Emerson, D., Rentz, J.A., Lilburn, T.G., Davis, R.E., Aldrich, H., Chan, C. and Moyer, C.L. (2007) A novel lineage of Proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities. PLoS ONE 2, e667
    • (2007) PLoS ONE , vol.2
    • Emerson, D.1    Rentz, J.A.2    Lilburn, T.G.3    Davis, R.E.4    Aldrich, H.5    Chan, C.6    Moyer, C.L.7
  • 9
    • 80051671415 scopus 로고    scopus 로고
    • Occurrence of iron and associated bacterial populations in soils of a forested subtropical coastal catchment
    • Lin, C., Larsen, E.I., Grace, P.R. and Smith, J.J. (2011) Occurrence of iron and associated bacterial populations in soils of a forested subtropical coastal catchment. Eur. J. Soil Biol. 47, 322-332
    • (2011) Eur. J. Soil Biol. , vol.47 , pp. 322-332
    • Lin, C.1    Larsen, E.I.2    Grace, P.R.3    Smith, J.J.4
  • 11
    • 84858021219 scopus 로고    scopus 로고
    • Increased abundance of Gallionella spp., Leptothrix spp. and total bacteria in response to enhanced Mn and Fe concentrations in a disturbed southern Appalachian high elevation wetland
    • Johnson, K.W., Carmichael, M.J., McDonald, W., Rose, N., Pitchford, J., Windelspecht, M., Karatan, E. and Bräuer, S.L. (2012) Increased abundance of Gallionella spp., Leptothrix spp. and total bacteria in response to enhanced Mn and Fe concentrations in a disturbed southern Appalachian high elevation wetland. Geomicrobiol. J. 29, 124-138
    • (2012) Geomicrobiol. J. , vol.29 , pp. 124-138
    • Johnson, K.W.1    Carmichael, M.J.2    McDonald, W.3    Rose, N.4    Pitchford, J.5    Windelspecht, M.6    Karatan, E.7    Bräuer, S.L.8
  • 12
    • 84870197452 scopus 로고    scopus 로고
    • Spatial patterns of iron- And methane-oxidizing bacterial communities in an irregularly flooded, riparian wetland
    • Wang, J., Krause, S., Muyzer, G., Meima-Franke, M., Laanbroek, H. and Bodelier, P.L.E. (2012) Spatial patterns of iron- and methane-oxidizing bacterial communities in an irregularly flooded, riparian wetland. Front. Microbiol. 3, 64
    • (2012) Front. Microbiol. , vol.3 , pp. 64
    • Wang, J.1    Krause, S.2    Muyzer, G.3    Meima-Franke, M.4    Laanbroek, H.5    Bodelier, P.L.E.6
  • 13
    • 84858634335 scopus 로고    scopus 로고
    • Bacteriogenic Fe(III) (oxyhydr)oxides characterized by synchrotron microprobe coupled with spatially resolved phylogenetic analysis
    • Mitsunobu, S., Shiraishi, F., Makita, H., Orcutt, B.N., Kikuchi, S., Jørgensen, B.B. and Takahashi, Y. (2012) Bacteriogenic Fe(III) (oxyhydr)oxides characterized by synchrotron microprobe coupled with spatially resolved phylogenetic analysis. Environ. Sci. Technol. 46, 3304-3311
    • (2012) Environ. Sci. Technol. , vol.46 , pp. 3304-3311
    • Mitsunobu, S.1    Shiraishi, F.2    Makita, H.3    Orcutt, B.N.4    Kikuchi, S.5    Jørgensen, B.B.6    Takahashi, Y.7
  • 15
    • 84863190761 scopus 로고    scopus 로고
    • Isolation and characterization of a novel biomineral stalk-forming iron-oxidizing bacterium from a circumneutral groundwater seep
    • Krepski, S.T., Hanson, T.E. and Chan, C.S. (2012) Isolation and characterization of a novel biomineral stalk-forming iron-oxidizing bacterium from a circumneutral groundwater seep. Environ. Microbiol. 14, 1671-1680
    • (2012) Environ. Microbiol. , vol.14 , pp. 1671-1680
    • Krepski, S.T.1    Hanson, T.E.2    Chan, C.S.3
  • 16
    • 84878982145 scopus 로고    scopus 로고
    • Microbial diversity and potential for arsenic and iron biogeochemical cycling at an arsenic rich, shallow-sea hydrothermal vent (Tutum Bay, Papua New Guinea)
    • doi:10.1016/j.chemgeo.2012.02.024
    • Meyer-Dombard, D., Arcy, R., Amend, J.P. and Osburn, M.R. (2012) Microbial diversity and potential for arsenic and iron biogeochemical cycling at an arsenic rich, shallow-sea hydrothermal vent (Tutum Bay, Papua New Guinea). Chem. Geol., doi:10.1016/j.chemgeo.2012.02.024
    • (2012) Chem. Geol.
    • Meyer-Dombard, D.1    Arcy, R.2    Amend, J.P.3    Osburn, M.R.4
  • 17
    • 79953171916 scopus 로고    scopus 로고
    • Neutrophilic iron-oxidizing "Zetaproteobacteria" and mild steel corrosion in nearshore marine environments
    • McBeth, J., Little, B., Ray, R., Farrar, K. and Emerson, D. (2011) Neutrophilic iron-oxidizing "Zetaproteobacteria" and mild steel corrosion in nearshore marine environments. Appl. Environ. Microbiol. 77, 1405-1412
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 1405-1412
    • McBeth, J.1    Little, B.2    Ray, R.3    Farrar, K.4    Emerson, D.5
  • 18
    • 80055093294 scopus 로고    scopus 로고
    • Molecular characterization of putative biocorroding microbiota with a novel niche detection of Epsilon- And Zetaproteobacteria in Pacific Ocean coastal seawaters
    • Dang, H., Chen, R., Wang, L., Shao, S., Dai, L., Ye, Y., Guo, L., Huang, G. and Klotz, M.G. (2011) Molecular characterization of putative biocorroding microbiota with a novel niche detection of Epsilon- and Zetaproteobacteria in Pacific Ocean coastal seawaters. Environ. Microbiol. 13, 3059-3074
    • (2011) Environ. Microbiol. , vol.13 , pp. 3059-3074
    • Dang, H.1    Chen, R.2    Wang, L.3    Shao, S.4    Dai, L.5    Ye, Y.6    Guo, L.7    Huang, G.8    Klotz, M.G.9
  • 19
    • 80055088364 scopus 로고    scopus 로고
    • High resolution 2D and 3D cryo-TEM reveal structural adaptations of two stalk-forming bacteria to an Fe-oxidizing lifestyle
    • Comolli, L.R., Luef, B. and Chan, C.S. (2011) High resolution 2D and 3D cryo-TEM reveal structural adaptations of two stalk-forming bacteria to an Fe-oxidizing lifestyle. Environ. Microbiol. 13, 2915-2929
    • (2011) Environ. Microbiol. , vol.13 , pp. 2915-2929
    • Comolli, L.R.1    Luef, B.2    Chan, C.S.3
  • 21
    • 79953024452 scopus 로고    scopus 로고
    • Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: Implications for biosignature formation
    • Chan, C.S., Fakra, S.C., Emerson, D., Fleming, E.J. and Edwards, K.J. (2011) Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: implications for biosignature formation. ISME J. 5, 717-727
    • (2011) ISME J. , vol.5 , pp. 717-727
    • Chan, C.S.1    Fakra, S.C.2    Emerson, D.3    Fleming, E.J.4    Edwards, K.J.5
  • 22
    • 79955579629 scopus 로고    scopus 로고
    • Nanometer-scale visualization and structural analysis of the inorganic/organic hybrid structure of Gallionella ferruginea twisted stalks
    • Suzuki, T., Hashimoto, H., Matsumoto, N., Furutani, M., Kunoh, H. and Takada, J. (2011) Nanometer-scale visualization and structural analysis of the inorganic/organic hybrid structure of Gallionella ferruginea twisted stalks. Appl. Environ. Microbiol. 77, 2877-2881
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 2877-2881
    • Suzuki, T.1    Hashimoto, H.2    Matsumoto, N.3    Furutani, M.4    Kunoh, H.5    Takada, J.6
  • 23
    • 79952757641 scopus 로고    scopus 로고
    • What's new is old: Resolving the identity of Leptothrix ochracea using single cell genomics, pyrosequencing and FISH
    • Fleming, E., Langdon, A., Martinez-Garcia, M., Stepanauskas, R., Poulton, N., Masland, E. and Emerson, D. (2011) What's new is old: resolving the identity of Leptothrix ochracea using single cell genomics, pyrosequencing and FISH. PLoS ONE 6, e17769
    • (2011) PLoS ONE , vol.6
    • Fleming, E.1    Langdon, A.2    Martinez-Garcia, M.3    Stepanauskas, R.4    Poulton, N.5    Masland, E.6    Emerson, D.7
  • 24
    • 77950870243 scopus 로고    scopus 로고
    • Microbiology of seamounts: Common patterns observed in community structure
    • Emerson, D. and Moyer, C. (2010) Microbiology of seamounts: common patterns observed in community structure. Oceanography 23, 148-163
    • (2010) Oceanography , vol.23 , pp. 148-163
    • Emerson, D.1    Moyer, C.2
  • 25
    • 36849013617 scopus 로고    scopus 로고
    • Characterization of neutrophilic Fe(II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov
    • DOI 10.1080/01490450701670152, PII 787909668
    • Weiss, J.V., Rentz, J.A., Plaia, T., Neubauer, S.C., Floyd, M.M., Lilburn, T.G., Bradburne, C., Megonigal, J.P. and Emerson, D. (2007) Characterization of neutrophilic Fe(II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov Geomicrobiol. J. 24, 559-570 (Pubitemid 350226672)
    • (2007) Geomicrobiology Journal , vol.24 , Issue.7-8 , pp. 559-570
    • Weiss, J.V.1    Rentz, J.A.2    Plaia, T.3    Neubauer, S.C.4    Merrill-Floyd, M.5    Lilburn, T.6    Bradburne, C.7    Megonigal, J.P.8    Emerson, D.9
  • 26
    • 0001833934 scopus 로고
    • The search for correlation between theoretical and experimental growth yields Int
    • Stouthamer, A.H. (1979) The search for correlation between theoretical and experimental growth yields Int. Rev. Biochem. 21, 1-47
    • (1979) Rev. Biochem. , vol.21 , pp. 1-47
    • Stouthamer, A.H.1
  • 28
    • 84855653203 scopus 로고    scopus 로고
    • Genomic insights into microbial iron oxidation and iron uptake strategies in extremely acidic environments
    • Bonnefoy, V. and Holmes, D.S. (2011) Genomic insights into microbial iron oxidation and iron uptake strategies in extremely acidic environments. Environ. Microbiol. 14, 1597-1611
    • (2011) Environ. Microbiol. , vol.14 , pp. 1597-1611
    • Bonnefoy, V.1    Holmes, D.S.2
  • 29
    • 79959886819 scopus 로고    scopus 로고
    • Bioenergetic challenges of microbial iron metabolisms
    • Bird, L., Bonnefoy, V. and Newman, D.K. (2011) Bioenergetic challenges of microbial iron metabolisms. Trends Microbiol. 19, 330-340
    • (2011) Trends Microbiol. , vol.19 , pp. 330-340
    • Bird, L.1    Bonnefoy, V.2    Newman, D.K.3
  • 30
    • 84870229708 scopus 로고    scopus 로고
    • Toward a mechanistic understanding of anaerobic nitrate-dependent iron oxidation: Balancing electron uptake and detoxification
    • Carlson, H.K., Clark, I.C., Melnyk, R.A. and Coates, J.D. (2012) Toward a mechanistic understanding of anaerobic nitrate-dependent iron oxidation: balancing electron uptake and detoxification. Front. Microbiol. 3, 57
    • (2012) Front. Microbiol. , vol.3 , pp. 57
    • Carlson, H.K.1    Clark, I.C.2    Melnyk, R.A.3    Coates, J.D.4
  • 31
    • 84863581057 scopus 로고    scopus 로고
    • Identification and characterization of MtoA: A decaheme c-type cytochrome of the neutrophilic Fe(II)-oxidizing bacterium Sideroxydans lithotrophicus ES-1
    • Liu, J., Wang, Z., Belchik, S.M., Edwards, M.J., Liu, C., Kennedy, D.W., Merkely, E.D., Lipton, M.S., Butt, J.N., Richardson, D.J. et al. (2012) Identification and characterization of MtoA: a decaheme c-type cytochrome of the neutrophilic Fe(II)-oxidizing bacterium Sideroxydans lithotrophicus ES-1. Front. Microbiol. 3, 37
    • (2012) Front. Microbiol. , vol.3 , pp. 37
    • Liu, J.1    Wang, Z.2    Belchik, S.M.3    Edwards, M.J.4    Liu, C.5    Kennedy, D.W.6    Merkely, E.D.7    Lipton, M.S.8    Butt, J.N.9    Richardson, D.J.10
  • 33
    • 80053123349 scopus 로고    scopus 로고
    • Genomic insights into the Fe-oxidizing bacterium Mariprofundus ferrooxydans PV-1: The first genome from the Zetaproteobacteria
    • Singer, E., Emerson, D., Webb, E.A., Ferriera, S., Johnson, J., Kuenen, J.G., Nelson, W.C. and Edwards, K.J. (2011) Genomic insights into the Fe-oxidizing bacterium Mariprofundus ferrooxydans PV-1: the first genome from the Zetaproteobacteria. PLoS ONE 6, e25386
    • (2011) PLoS ONE , vol.6
    • Singer, E.1    Emerson, D.2    Webb, E.A.3    Ferriera, S.4    Johnson, J.5    Kuenen, J.G.6    Nelson, W.C.7    Edwards, K.J.8
  • 36
    • 78149471622 scopus 로고    scopus 로고
    • The alternative complex III: A different architecture using known building modules
    • Refojo, P.N., Sousa, F.L., Teixeira, M. and Pereira, M.M. (2010) The alternative complex III: a different architecture using known building modules. Biochim. Biophys. Acta 1797, 1869-1876
    • (2010) Biochim. Biophys. Acta , vol.1797 , pp. 1869-1876
    • Refojo, P.N.1    Sousa, F.L.2    Teixeira, M.3    Pereira, M.M.4
  • 38
    • 84870221330 scopus 로고    scopus 로고
    • Rust never sleeps: A new wave for neutral-pH Fe redox cycling
    • Roden, E.E. and Emerson, D. (2012) Rust never sleeps: a new wave for neutral-pH Fe redox cycling. Environ. Microbiol. Rep. 3, 21-22
    • (2012) Environ. Microbiol. Rep. , vol.3 , pp. 21-22
    • Roden, E.E.1    Emerson, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.