Proteomics in reproductive biology: Beacon for unraveling the molecular complexities

Biochimica et Biophysica Acta - Proteins and Proteomics

Volumn 1834, Issue 1, 2013, Pages 8-15

  Upadhyay, Rahul D ^a   Balasinor, N H ^a   Kumar, Anita V ^a   Sachdeva, Geetanjali ^a   Parte, Priyanka ^a   Dumasia, Kushaan ^a  

^a NATIONAL INSTITUTE FOR RESEARCH IN REPRODUCTIVE HEALTH   (India)

Author keywords

Biomarker; Fertility; Infertility; Proteomics; Reproductive biology

Indexed keywords

BIOLOGICAL MARKER;

EARLY DIAGNOSIS; EMBRYO DEVELOPMENT; ENDOMETRIOSIS; ENDOMETRIUM; GEL ELECTROPHORESIS; GENITAL SYSTEM; HUMAN; ISOTOPE CODED AFFINITY TAGS; LIQUID CHROMATOGRAPHY; MALE GENITAL SYSTEM; MASS SPECTROMETRY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MEDICAL RESEARCH; MEDICAL TECHNOLOGY; MULTIDIMENSIONAL PROTEIN IDENTIFICATION TECHNOLOGY; OOCYTE DEVELOPMENT; OVARY POLYCYSTIC DISEASE; PRIORITY JOURNAL; PROTEIN DETERMINATION; PROTEOMICS; REPRODUCTION; REVIEW; SPERMATOGENESIS; SURFACE ENHANCED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; TWO DIMENSIONAL GEL ELECTROPHORESIS; UTERUS FLUID;

ANIMALS; ENDOMETRIUM; FEMALE; GENITALIA, MALE; HUMANS; INFERTILITY; MALE; PROTEOME; PROTEOMICS; REPRODUCTION;

HARNESS;

EID: 84869866164     PISSN: 15709639     EISSN: 18781454     Source Type: Journal    
DOI: 10.1016/j.bbapap.2012.10.004     Document Type: Review

References (78)

1. P.J. Turek Practical approaches to the diagnosis and management of male infertility Nat. Clin. Pract. Urol. 2 2005 226 238
2. A. Kolialexi, A. Mavrou, G. Spyrou, and G.Th. Tsangaris Mass spectrometry based proteomics in reproductive medicine Mass Spectrom. Rev. 27 2008 624 634
3. X. Guo, C. Zhao, F. Wang, Y. Zhu, Y. Cui, Z. Zhou, R. Huo, and J. Sha Investigation of human testis protein heterogeneity using 2-dimensional electrophoresis J. Androl. 31 2010 419 429
4. R. Huo, Y. He, C. Zhao, X.J. Guo, M. Lin, and J.H. Sha Identification of human spermatogenesis-related proteins by comparative proteomic analysis: a preliminary study Fertil. Steril. 90 2008 1109 1118
5. E. Com, B. Evrard, P. Roepstorff, F. Aubry, and C. Pineau New insights into the rat spermatogonial proteome: identification of 156 additional proteins Mol. Cell. Proteomics 2 2003 248 261
6. A.D. Rolland, B. Evrard, N. Guitton, R. Lavigne, P. Calvel, M. Couvet, B. Jégou, and C. Pineau Two-dimensional fluorescence difference gel electrophoresis analysis of spermatogenesis in the rat J. Proteome Res. 6 2007 683 697
7. J. Li, F. Liu, X. Liu, J. Liu, P. Zhu, F. Wan, S. Jin, W. Wang, N. Li, J. Liu, and H. Wang Mapping of the human testicular proteome and its relationship with that of the epididymis and spermatozoa Mol. Cell. Proteomics 10 2011
8. J.L. Dacheux, and J.K. Voglmayr Sequence of sperm cell surface differentiation and its relationship to exogenous fluid proteins in the ram epididymis Biol. Reprod. 29 1983 1033 1046
9. J.L. Dacheux, J.L. Gatti, and F. Dacheux Contribution of epididymal secretory proteins for spermatozoa Microsc. Res. Tech. 61 2003 7 17
10. T.T. Turner, D.W. Miller, and E.A. Avery Protein synthesis and secretion by the rat caput epididymidis in vivo: influence of the luminal microenvironment Biol. Reprod. 52 1995 1012 1019
11. T.T. Turner, T.A. Riley, D.D. Mruk, and C.Y. Cheng Obstruction of the vas deferens alters protein secretion by the rat caput epididymidal epithelium in vivo J. Androl. 20 1999 289 297
12. X. Druart, J.L. Gatti, F. Dacheux, and J.L. Dacheux Analysis by two-dimensional gel electrophoresis of ram epididymal secreted proteins Cell. Mol. Biol. (Noisy-le-grand) 40 1994 91 93
13. P. Syntin, F. Dacheux, X. Druart, J.L. Gatti, N. Okamura, and J.L. Dacheux Characterization and identification of proteins secreted in the various regions of the adult boar epididymis Biol. Reprod. 55 1996 956 974
14. J.L. Dacheux, M. Belghazi, Y. Lanson, and F. Dacheux Human epididymal secretome and proteome Mol. Cell. Endocrinol. 250 2006 36 42
15. J.L. Dacheux, C. Belleannée, R. Jones, V. Labas, M. Belghazi, B. Guyonnet, X. Druart, J.L. Gatti, and F. Dacheux Mammalian epididymal proteome Mol. Cell. Endocrinol. 306 2009 45 50
16. N. Okamura, S. Kiuchi, M. Tamba, T. Kashima, S. Hiramoto, T. Baba, F. Dacheux, J.L. Dacheux, Y. Sugita, and Y.Z. Jin A porcine homolog of the major secretory protein of human epididymis, HE1, specifically binds cholesterol Biochim. Biophys. Acta 1438 1999 377 387
17. S. Fouchecourt, S. Metayer, A. Locatelli, F. Dacheux, and J.L. Dacheux Stallion epididymal fluid proteome: qualitative and quantitative characterization; secretion and dynamic changes of major proteins Biol. Reprod. 62 2000 1790 1803
18. K. Yamakawa, K. Yoshida, H. Nishikawa, T. Kato, and T. Iwamoto Comparative analysis of interindividual variations in the seminal plasma proteome of fertile men with identification of potential markers for azoospermia in infertile patients J. Androl. 28 2007 858 865
19. J. Shetty, A.B. Diekman, F.C. Jayes, N.E. Sherman, S. Naaby-Hansen, C.J. Flickinger, and J.C. Herr Differential extraction and enrichment of human sperm surface proteins in a proteome: identification of immunocontraceptive candidates Electrophoresis 22 2001 3053 3066
20. M.A. Baker, G. Reeves, L. Hetherington, J. Muller, and I. Baur Identification of geneproducts present in Triton X-100 soluble and insoluble fractions of human spermatozoa lysates using LC-MS/MS analysis Proteomics Clin. Appl. 1 2007 524 532
21. S. de Mateo, J. Castillo, J.M. Estanyol, J.L. Ballescà, and R. Oliva Proteomic characterization of the human sperm nucleus Proteomics 11 2011 2714 2726
22. T. Yoshii, N. Kuji, S. Komatsu, K. Iwahashi, and Y. Tanaka Fine resolution of human sperm nucleoproteins by two-dimensional electrophoresis Mol. Hum. Reprod. 11 2005 677 681
23. L. de Yebra, J.L. Ballesca, J.A. Vanrell, M. Corzett, and R. Balhorn Detection of P2 precursors in the sperm cells of infertile patients who have reduced protamine P2 levels Fertil. Steril. 69 1998 755 759
24. J. Shetty, S. Naaby-Hansen, H. Shibahara, R. Bronson, C.J. lickinger, and J.C. Herr Human sperm proteome: immunodominant sperm surface antigens identified with sera from infertile men and women Biol. Reprod. 61 1999 61 69
25. K.L. Pixton, E.D. Deeks, F.M. Flesch, F.L. Moseley, and L. Bjorndahl Sperm proteome mapping of a patient who experienced failed fertilization at IVF reveals altered expression of at least 20 proteins compared with fertile donors: case report Hum. Reprod. 19 2004 1438 1447
26. S. de Mateo, J. Martinez-Heredia, J.M. Estanyol, D. Dominguez-Fandos, and J.M. Vidal-Taboada Marked correlations in protein expression identified by proteomic analysis of human spermatozoa Proteomics 7 2007 4264 4277
27. T.T. Liao, Z. Xiang, W.B. Zhu, and L.Q. Fan Proteome analysis of round-headed and normal spermatozoa by 2-D fluorescence difference gel electrophoresis and mass spectrometry Asian J. Androl. 11 2009 683 693
28. J. Martinez-Heredia, J.M. Estanyol, J.L. Ballesca, and R. Oliva Proteomic identification of human sperm proteins Proteomics 6 2006 4356 4369
29. C. Zhao, R. Huo, F.Q. Wang, M. Lin, Z.M. Zhou, and J.H. Sha Identification of several proteins involved in regulation of sperm motility by proteomic analysis Fertil. Steril. 87 2007 436 438
30. J. Martinez-Heredia, S. de Mateo, J.M. Vidal-Taboada, J.L. Ballesca, and R. Oliva Identification of proteomic differences in asthenozoospermic sperm samples Hum. Reprod. 23 2008 783 791
31. A.B. Siva, D.B. Kameshwari, V. Singh, K. Pavani, C.S. Sundaram, N. Rangaraj, M. Deenadayal, and S. Shivaji Proteomics-based study on asthenozoospermia: differential expression of proteasome alpha complex Mol. Hum. Reprod. 16 2010 452 462
32. C.C. Chan, H.A. Shui, C.H. Wu, C.Y. Wang, G.H. Sun, H.M. Chen, and G.J. Wu Motility and protein phosphorylation in healthy and asthenozoospermic sperm J. Proteome Res. 8 2009 5382 5386
33. S. Ficarro, O. Chertihin, V.A. Westbrook, F. White, F. Jayes, P. Kalab, J.A. Marto, J. Shabanowitz, J.C. Herr, D.F. Hunt, and P.E. Visconti Phosphoproteome analysis of capacitated human sperm: evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation J. Biol. Chem. 278 2003 11579 11589
34. P.P. Parte, P. Rao, S. Redij, V. Lobo, S.J. D'Souza, R. Gajbhiye, and V. Kulkarni Sperm phosphoproteome profiling by ultra performance liquid chromatography followed by data independent analysis (LC-MSE) reveals altered proteomic signatures in asthenozoospermia J. Proteomics 75 2012 5861 5871
35. F. Secciani, L. Bianchi, L. Ermini, R. Cianti, A. Armini, G.B. La Sala, R. Focarelli, L. Bini, and F. Rosati Protein profile of capacitated versus ejaculated human sperm J. Proteome Res. 8 2009 3377 3389
36. T. Yamamoto, T. Fukushima, R. Kikkawa, H. Yamada, and I. Horii Protein expression analysis of rat testes induced testicular toxicity with several reproductive toxicants J. Toxicol. Sci. 30 2005 111 126
37. L. DeSouza, G. Diehl, M.J. Rodrigues, J. Guo, A.D. Romaschin, T.J. Colgan, and K.W. Siu Search for cancer markers from endometrial tissues using differentially labeled tagsiTRAQ and cICAT with multidimentional liquid chromatography and tandem mass spectrometry J. Proteome Res. 4 2005 377 386
38. T. Parmar, S. Gadkar-Sable, L. Savardekar, R. Katkam, S. Dharma, P. Meherji, C.P. Puri, and G. Sachdeva Protein profiling of human endometrial tissues in the midsecretory and proliferative phases of the menstrual cycle Fertil. Steril. 92 2009 1091 1103
39. J. Chen, N. Hannan, Y. Mak, P. Nicholls, J. Zhang, A. Rainczuk, P. Stanton, D. Robertson, L. Salamonsen, and A.N. Stephens Proteomic characterization of mid-proliferative and mid-secretory human endometrium J. Proteome Res. 8 2009 2023 2044
40. F. Domínguez, T. Garrido-Gómez, J.A. López, E. Camafeita, A. Quiñonero, A. Pellicer, and C. Simón Proteomic analysis of the human receptive versus non-receptive endometrium using differential in-gel electrophoresis and MALDI-MS unveils stathmin 1 and annexin A2 as differentially regulated Hum. Reprod. 24 2009 2607 2617
41. P. Rai, V. Kota, C.S. Sundaram, M. Deendayal, and S. Shivaji Proteome of human endometrium: identification of differentially expressed proteins in proliferative and secretory phase endometrium Proteomics Clin. Appl. 4 2010 48 59
42. J. Casado-Vela, E. Rodriguez-Suarez, I. Iloro, A. Ametzazurra, N. Alkorta, J.A. Garcia-Velasco, R. Matorras, B. Prieto, S. Gonzalez, and D. Nagore Comprehensive proteomic analysis of human endometrial fluid aspirate J. Proteome Res. 8 2009 4622 4632
43. N.J. Hannan, A.N. Stephens, C. Hincks, A. Rainczuk, L.J.F. Rombauts, and L.A. Salamonsen The endometrial secretome: potential roles in endometrial receptivity J. Proteome Res. 9 2010 6256 6264
44. H. Zhang, Y. Niu, J. Feng, H. Guo, X. Ye, and H. Cui Use of proteomic analysis of endometriosis to identify different protein expression in patients with endometriosis versus normal controls Fertil. Steril. 86 2006 274 282
45. J.G. Scotchie, M.A. Fritz, M. Mocanu, B.A. Lessey, and S.L. Young Proteomic analysis of the luteal endometrial secretome Reprod. Sci. 16 2009 883 893
46. S.T. Have, I. Fraser, R. Markham, A. Lam, and I. Matsumoto Proteomic analysis of protein expression in the eutopic endometrium of women with endometriosis Proteomics Clin. Appl. 1 2007 1243 1251
47. P.A. Fowler, J. Tattum, S. Bhattacharya, T. Klonisch, S. Hombach-Klonisch, R. Gazvani, R.G. Lea, I. Miller, W.G. Simpson, and P. Cash An investigation of the effects of endometriosis on the proteome of human eutopic endometrium: a heterogeneous tissue with a complex disease Proteomics 7 2007 130 142
48. N. Chehna-Patel, N. Warty, G. Sachdeva, and V. Khole Proteolytic tailoring of the heat shock protein 70 and its implications in the pathogenesis of endometriosis Fertil. Steril. 95 2011 1560 1567
49. A. Dunaif Insulin resistance and the polycystic ovary syndrome: mechanism and implications for pathogenesis Endocr. Rev. 18 1997 774 800
50. E.S. Knochenhauer, T.J. Key, M. Kahsar-Miller, W. Waggoner, L.R. Boots, and R. Azziz Prevalence of the polycystic ovary syndrome in unselected black and white women of the southeastern United States: a prospective study J. Clin. Endocrinol. Metab. 83 1998 3078 3082
51. M. Corton, J.I. Botella-Carretero, A. Benguria, G. Villuendas, A. Zaballos, J.L. San Millan, H.F. Escobar-Morreale, and B. Peral Differential gene expression profile in omental adipose tissue in women with polycystic ovary syndrome J. Clin. Endocrinol. Metab. 92 2007 328 337
52. X. Ma, L. Fan, Y. Meng, Z. Hou, Y. Mao, W. Wang, W. Ding, and J. Liu Proteomic analysis of human ovaries from normal and polycystic ovarian syndrome Mol. Hum. Reprod. 13 2007 527 535
53. J.J. Michiels, and H.H. Van Vliet Hereditary antithrombin III deficiency and venous thrombosis Neth. J. Med. 27 1984 226 232
54. B. Blombäck Fibrinogen and fibrin - proteins with complex roles in hemostasis and thrombosis Thromb. Res. 83 1996 1 75
55. H.M. Kang, K.S. Choi, G. Kassam, S.L. Fitzpatrick, M. Kwon, and D.M. Waisman Role of annexin II tetramer in plasminogen activation Trends Cardiovasc. Med. 9 1999 92 102
56. G.A. Burghen, J.R. Givens, and A.E. Kitabchi Correlation of hyperandrogenism with hyperinsulinism in polycystic ovarian disease J. Clin. Endocrinol. Metab. 50 1980 113 116
57. G.M. Reaven Role of insulin resistance in the pathophysiology of non-insulin dependent diabetes mellitus Diabetes Metab. Rev. 1 1993 5S 12S
58. L.A. Fahien, and M.J. MacDonald The succinate mechanism of insulin release Diabetes 51 2002 2669 2676
59. C. Paneda, I. Gorospe, B. Herrera, T. Nakamura, I. Fabregat, and I. Varela-Nieto Liver cell proliferation requires methionine adenosyltransferase 2A mRNA up-regulation Hepatology 35 2002 1381 1391
60. R. Genolet, S. Kersten, O. Braissant, S. Mandard, N.S. Tan, P. Bucher, B. Desvergne, L. Michalik, and W. Wahli Promoter rearrangements cause species-specific hepatic regulation of the glyoxylate reductase/hydroxypyruvate reductase gene by the peroxisome proliferator-activated receptor alpha J. Biol. Chem. 280 2005 24143 24152
61. J. Liu, X. Ma, L. Cai, Y. Cui, and J. Liu Downregulation of both gene expression and activity of Hsp27 improved maturation of mouse oocyte in vitro Reprod. Biol. Endocrinol. 8 2010
62. M. Insenser, M.A. Martínez-García, R. Montes, J.L. San-Millán, and H.F. Escobar-Morreale Proteomic analysis of plasma in the polycystic ovary syndrome identifies novel markers involved in iron metabolism, acute-phase response, and inflammation J. Clin. Endocrinol. Metab. 95 2010 3863 3870
63. S.Y. Zhao, J. Qiao, and M.Z. Li Protein expression profilings of polycystic ovary syndrome Beijing Da Xue Xue Bao 37 2005 362 365
64. Y. Meng, L. Xiao-hui, Y. Shen, L. Fan, J. Leng, J. Liu, and J. Sha The protein profile of mouse mature cumulus-oocyte complex Biochim. Biophys. Acta 1774 2007 1477 1490
65. M. Ma, X. Wang, F. Wang, C. Zhao, Z. Liu, Z. Shi, Y. Wang, P.P. Zhang, K. Zhang, N. Wang, M. Lin, Z. Zhou, J. Liu, Q. Li, L. Wang, R. Huo, J. Sha, and Q. Zhou Protein expression profile of the Mouse Metaphase II oocyte J. Proteome Res. 7 2008 4821 4830
66. P. Zhang, X. Ni, Y. Guo, X. Guo, Y. Wang, Z. Zhou, R. Huo, and J. Sha Proteomic based identification of maternal proteins in mature mouse oocytes BMC Genomics 10 2009 1471 2164
67. M.J. Pfeiffer, M. Siatkowski, Y. Paudel, S.T. Balbach, N. Baeumer, N. Crosetto, H.C.A. Drexler, G. Fuellen, and M. Boiani Proteomic analysis of mouse oocytes reveals 28 candidate factors for the "Reprogammome" J. Proteomic Res. 10 2011 2140 2153
68. G. Zegels, G.A.A. Van Raemdonck, E.P. Coen, W.A.A. Tjalma, and X.W.M. Van Ostade Comprehensive proteomic analysis of human cervical-vaginal fluid using colposcopy samples Prot. Sci. 7 2009 17
69. L.J. Tang, S.F. De, F. Odreman, P. Venge, C. Piva, S. Guaschino, and R.C. Garcia Proteomic analysis of human cervical-vaginal fluids J. Proteome Res. 6 2007 2874 2883
70. J.L. Shaw, C.R. Smith, and E.P. Diamandis Proteomic analysis of human cervico-vaginal fluid J. Proteome Res. 6 2007 2859 2865
71. L. Pereira, A.P. Reddy, T. Jacob, A. Thomas, K.A. Schneider, S. Dasari, J.A. Lapidus, X. Lu, M. Rodland, C.T. Roberts Jr., M.G. Gravett, and S.R. Nagalla Identification of novel protein biomarkers of preterm birth in human cervical-vaginal fluid J. Proteome Res. 6 2007 1269 1276
72. L.L. Klein, K.R. Jonscher, M.J. Heerwagen, R.S. Gibbs, and J.L. McManaman Shotgun proteomic analysis of vaginal fluid from women in late pregnancy Reprod. Sci. 15 2008 263 273
73. M.G. Katz-Jaffe, D.W. Linck, W.B. Schoolcraft, and D.K. Gardner A proteomic analysis of mammalian preimplantation embryonic development Reproduction 130 2005 899 905
74. M.G. Katz-Jaffe, W.B. Schoolcraft, and D.K. Gardner Analysis of protein expression (secretome) by human and mouse preimplantation embryos Fertil. Steril. 86 2006 678 685
75. M.G. Katz-Jaffe, D.K. Gardner, and W.B. Schoolcraft Proteomic analysis of individual human embryos to identify novel biomarkers of development and viability Fertil. Steril. 85 2006 101 107
76. C. O'Neill The role of paf in embryo physiology Hum. Reprod. Update 11 2005 215 228
77. F. Domínguez, B. Gadea, F.J. Esteban, J.A. Horcajadas, A. Pellicer, and C. Simón Comparative protein-profile analysis of implanted versus non-implanted human blastocysts Hum. Reprod. 23 2008 1993 2000
78. M.B. Lucitt, T.S. Price, A. Pizarro, W. Wu, A.K. Yocum, C. Seller, M.A. Pack, I.A. Blair, G.A. FitzGerald, and T. Grosser Analysis of the zebrafish proteome during embryonic development Mol. Cell. Proteomics 7 2008 981 994