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Volumn 85, Issue 3, 2012, Pages 283-288

Crystal structure of Citrobacter freundii Asp214Ala Tyrosine phenol-lyase reveals that Asp214 is critical for maintaining a strain in the internal aldimine

(5) Milić, Dalibor a Demidkina, Tatyana V b Zakomirdina, Lyudmila N b Matković Čalogović, Dubravka a Antson, Alfred A c

a UNIVERSITY OF ZAGREB (Croatia)

b ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY (Russian Federation)

c UNIVERSITY OF YORK (United Kingdom)

Author keywords

Chemical strain; Internal aldimine; Pyridoxal 5' phosphate; Tyrosine phenol lyase; X ray structure

Indexed keywords

EID: 84869483065 PISSN: 00111643 EISSN: 1334417X Source Type: Journal
DOI: 10.5562/cca1915 Document Type: Article

Times cited : (4)

References (28)

1
- 3943113663
- A. C. Eliot and J. F. Kirsch, Annu. Rev. Biochem. 73 (2004) 383-415.
- (2004) Annu. Rev. Biochem. , vol.73 , pp. 383-415
- Eliot, A.C.¹ Kirsch, J.F.²

2
- 85030904421
- H. Hayashi, H. Mizuguchi, I. Miyahara, M. M. Islam, H. Ikushiro, Y. Nakajima, K. Hirotsu, and H. Kagamiyama, Biochim. Biophys. Acta, Proteins Proteomics 1647 (2003) 103-109.
- (2003) Biochim. Biophys. Acta, Proteins Proteomics , vol.1647 , pp. 103-109
- Hayashi, H.¹ Mizuguchi, H.² Miyahara, I.³ Islam, M.M.⁴ Ikushiro, H.⁵ Nakajima, Y.⁶ Hirotsu, K.⁷ Kagamiyama, H.⁸

3
- 0037646540
- H. Hayashi, H. Mizuguchi, I. Miyahara, Y. Nakajima, K. Hirotsu, and H. Kagamiyama, J. Biol. Chem. 278 (2003) 9481-9488.
- (2003) J. Biol. Chem. , vol.278 , pp. 9481-9488
- Hayashi, H.¹ Mizuguchi, H.² Miyahara, I.³ Nakajima, Y.⁴ Hirotsu, K.⁵ Kagamiyama, H.⁶

4
- 22444440389
- A. P. Dubnovitsky, R. B. G. Ravelli, A. N. Popov, and A. C. Papageorgiou, Protein Sci. 14 (2005) 1498-1507.
- (2005) Protein Sci. , vol.14 , pp. 1498-1507
- Dubnovitsky, A.P.¹ Ravelli, R.B.G.² Popov, A.N.³ Papageorgiou, A.C.⁴

5
- 0013902457
- H. C. Dunathan, P. Natl. Acad. Sci. USA 55 (1966) 712-716.
- (1966) P. Natl. Acad. Sci. USA , vol.55 , pp. 712-716
- Dunathan, H.C.¹

6
- 70349087290
- J. P. Richard, T. L. Amyes, J. Crugeiras, and A. Rios, Curr. Opin. Chem. Biol. 13 (2009) 475-483.
- (2009) Curr. Opin. Chem. Biol. , vol.13 , pp. 475-483
- Richard, J.P.¹ Amyes, T.L.² Crugeiras, J.³ Rios, A.⁴

7
- 0031032448
- J. P. Shaw, G. A. Petsko, and D. Ringe, Biochemistry 36 (1997) 1329-1342.
- (1997) Biochemistry , vol.36 , pp. 1329-1342
- Shaw, J.P.¹ Petsko, G.A.² Ringe, D.³

8
- 0027253104
- A. A. Antson, T. V. Demidkina, P. Gollnick, Z. Dauter, R. L. Von Tersch, J. Long, S. N. Berezhnoy, R. S. Phillips, E. H. Harutyunyan, and K. S. Wilson, Biochemistry 32 (1993) 4195-4206.
- (1993) Biochemistry , vol.32 , pp. 4195-4206
- Antson, A.A.¹ Demidkina, T.V.² Gollnick, P.³ Dauter, Z.⁴ Von Tersch, R.L.⁵ Long, J.⁶ Berezhnoy, S.N.⁷ Phillips, R.S.⁸ Harutyunyan, E.H.⁹ Wilson, K.S.¹⁰

9
- 0030982177
- B. Sundararaju, A. A. Antson, R. S. Phillips, T. V. Demidkina, M. V. Barbolina, P. Gollnick, G. G. Dodson, and K. S. Wilson, Biochemistry 36 (1997) 6502-6510.
- (1997) Biochemistry , vol.36 , pp. 6502-6510
- Sundararaju, B.¹ Antson, A.A.² Phillips, R.S.³ Demidkina, T.V.⁴ Barbolina, M.V.⁵ Gollnick, P.⁶ Dodson, G.G.⁷ Wilson, K.S.⁸

10
- 0031520247
- S. V. Pletnev, A. A. Antson, N. I. Sinitsyna, Z. Dauter, M. N. Isupov, E. N. Hurs, N. G. Faleev, K. S. Wilson, G. Dodson, T. V. Demidkina, and E. G. Arutyunyan, Crystallogr. Rep. 42 (1997) 809-819.
- (1997) Crystallogr. Rep. , vol.42 , pp. 809-819
- Pletnev, S.V.¹ Antson, A.A.² Sinitsyna, N.I.³ Dauter, Z.⁴ Isupov, M.N.⁵ Hurs, E.N.⁶ Faleev, N.G.⁷ Wilson, K.S.⁸ Dodson, G.⁹ Demidkina, T.V.¹⁰ Arutyunyan, E.G.¹¹

11
- 33746093225
- T. V. Demidkina, N. G. Faleev, A. I. Papisova, N. P. Bazhulina, V. V. Kulikova, P. D. Gollnick, and R. S. Phillips, Biochim. Biophys. Acta, Proteins Proteomics 1764 (2006) 1268-1276.
- (2006) Biochim. Biophys. Acta, Proteins Proteomics , vol.1764 , pp. 1268-1276
- Demidkina, T.V.¹ Faleev, N.G.² Papisova, A.I.³ Bazhulina, N.P.⁴ Kulikova, V.V.⁵ Gollnick, P.D.⁶ Phillips, R.S.⁷

12
- 57649194815
- D. Milić, T. V. Demidkina, N. G. Faleev, D. Matković- Čalogović, and A. A. Antson, J. Biol. Chem. 283 (2008) 29206-29214.
- (2008) J. Biol. Chem. , vol.283 , pp. 29206-29214
- Milić, D.¹ Demidkina, T.V.² Faleev, N.G.³ Matković- Čalogović, D.⁴ Antson, A.A.⁵

13
- 33745125692
- D. Milić, D. Matković-Čalogović, T. V. Demidkina, V. V. Kulikova, N. I. Sinitzina, and A. A. Antson, Biochemistry 45 (2006) 7544-7552.
- (2006) Biochemistry , vol.45 , pp. 7544-7552
- Milić, D.¹ Matković-Čalogović, D.² Demidkina, T.V.³ Kulikova, V.V.⁴ Sinitzina, N.I.⁵ Antson, A.A.⁶

14
- 0031059866
- Z. Otwinowski and W. Minor, Methods Enzymol. 276 (1997) 307-326.
- (1997) Methods Enzymol. , vol.276 , pp. 307-326
- Otwinowski, Z.¹ Minor, W.²

15
- 0030924992
- G. N. Murshudov, A. A. Vagin, and E. J. Dodson, Acta Crystallogr., Sect. D 53 (1997) 240-255.
- (1997) Acta Crystallogr., Sect. D , vol.53 , pp. 240-255
- Murshudov, G.N.¹ Vagin, A.A.² Dodson, E.J.³

16
- 0035182073
- M. D. Winn, M. N. Isupov, and G. N. Murshudov, Acta Crystallogr., Sect. D 57 (2001) 122-133.
- (2001) Acta Crystallogr., Sect. D , vol.57 , pp. 122-133
- Winn, M.D.¹ Isupov, M.N.² Murshudov, G.N.³

17
- 77949535720
- P. Emsley, B. Lohkamp, W. G. Scott, and K. Cowtan, Acta Crystallogr., Sect. D 66 (2010) 486-501.
- (2010) Acta Crystallogr., Sect. D , vol.66 , pp. 486-501
- Emsley, P.¹ Lohkamp, B.² Scott, W.G.³ Cowtan, K.⁴

18
- 0032964481
- A. Perrakis, R. Morris, and V. S. Lamzin, Nat. Struct. Biol. 6 (1999) 458-463.
- (1999) Nat. Struct. Biol. , vol.6 , pp. 458-463
- Perrakis, A.¹ Morris, R.² Lamzin, V.S.³

19
- 0028103275
- Collaborative Computational Project, Number 4
- Collaborative Computational Project, Number 4, Acta Crystallogr., Sect. D 50 (1994) 760-763.
- (1994) Acta Crystallogr., Sect. D , vol.50 , pp. 760-763

20
- 80054730696
- D. Milić, T. V. Demidkina, N. G. Faleev, R. S. Phillips, D. Matković-Čalogović, and A. A. Antson, J. Am. Chem. Soc. 133 (2011) 16468-16476.
- (2011) J. Am. Chem. Soc. , vol.133 , pp. 16468-16476
- Milić, D.¹ Demidkina, T.V.² Faleev, N.G.³ Phillips, R.S.⁴ Matković-Čalogović, D.⁵ Antson, A.A.⁶

21
- 33846458266
- J. Hašek, Z. Kristallogr. Suppl. 23 (2006) 613-618.
- (2006) Z. Kristallogr. Suppl. , vol.23 , pp. 613-618
- Hašek, J.¹

22
- 34547592557
- I. W. Davis, A. Leaver-Fay, V. B. Chen, J. N. Block, G. J. Kapral, X. Wang, L. W. Murray, W. B. Arendall, III, J. Snoeyink, J. S. Richardson, and D. C. Richardson, Nucl. Acids Res. 35 (2007) W375-383.
- (2007) Nucl. Acids Res. , vol.35
- Davis, I.W.¹ Leaver-Fay, A.² Chen, V.B.³ Block, J.N.⁴ Kapral, G.J.⁵ Wang, X.⁶ Murray, L.W.⁷ Arendall III, W.B.⁸ Snoeyink, J.⁹ Richardson, J.S.¹⁰ Richardson, D.C.¹¹

23
- 66749116183
- Palo Alto, CA, USA
- W. L. De Lano, The PyMOL Molecular Graphics System, DeLano Scientific, Palo Alto, CA, USA (http://www.pymol.org), 2002.
- (2002) The PyMOL Molecular Graphics System, DeLano Scientific
- De Lano, W.L.¹

24
- 0027757040
- T. Yano, Y. Hinoue, V. J. Chen, D. E. Metzler, I. Miyahara, K. Hirotsu, and H. Kagamiyama, J. Mol. Biol. 234 (1993) 1218-1229.
- (1993) J. Mol. Biol. , vol.234 , pp. 1218-1229
- Yano, T.¹ Hinoue, Y.² Chen, V.J.³ Metzler, D.E.⁴ Miyahara, I.⁵ Hirotsu, K.⁶ Kagamiyama, H.⁷

25
- 0027954463
- J. J. Onuffer and J. F. Kirsch, Protein Eng. 7 (1994) 413-424.
- (1994) Protein Eng. , vol.7 , pp. 413-424
- Onuffer, J.J.¹ Kirsch, J.F.²

26
- 84869460125
- That Affects Binding of the Coenzyme in D-Amino Acid Transaminase, and Mechanistic Studies on a Suicide Substrate, in: A. Iriarte, H. M. Kagan and M. Martinez-Carrion Ed., Biochemistry and Molecular Biology of Vitamin B6 and PQQ-dependent Proteins, Birkhäuser Verlag, Basel, Switzerland
- P. W. van Ophem, B. W. Lepore, K. Kishimoto, D. Ringe, and J. M. Manning, Studies on an Active Site residue, E177, That Affects Binding of the Coenzyme in D-Amino Acid Transaminase, and Mechanistic Studies on a Suicide Substrate in: A. Iriarte, H. M. Kagan and M. Martinez-Carrion (Ed.), Biochemistry and Molecular Biology of Vitamin B6 and PQQ-dependent Proteins, Birkhäuser Verlag, Basel, Switzerland, 2000, pp. 339-346.
- (2000) Studies on an Active Site Residue , vol.E177 , pp. 339-346
- Van Ophem, P.W.¹ Lepore, B.W.² Kishimoto, K.³ Ringe, D.⁴ Manning, J.M.⁵

27
- 0032492728
- D. Peisach, D. M. Chipman, P. W. Van Ophem, J. M. Manning, and D. Ringe, Biochemistry 37 (1998) 4958-4967.
- (1998) Biochemistry , vol.37 , pp. 4958-4967
- Peisach, D.¹ Chipman, D.M.² Van Ophem, P.W.³ Manning, J.M.⁴ Ringe, D.⁵

28
- 0033106268
- D. Cruickshank, Acta Crystallogr., Sect. D 55 (1999) 583-601.
- (1999) Acta Crystallogr., Sect. D , vol.55 , pp. 583-601
- Cruickshank, D.¹

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