Parallel Verlet Neighbor List algorithm for GPU-optimized MD simulations

2012 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2012

Volumn , Issue , 2012, Pages 321-328

  Lipscomb, Tyson J ^a   Zou, Anqi ^a   Cho, Samuel S ^a  

^a WAKE FOREST UNIVERSITY   (United States)

Author keywords

Coarse grained MD simulations; CUDPP; CURAND; Energy drift; Floating point analysis

Indexed keywords

CUDPP; CURAND; ENERGY DRIFT; FLOATING POINTS; MD SIMULATION;

ALGORITHMS; DATA TRANSFER; MACROMOLECULES; MOLECULAR DYNAMICS; OPTIMIZATION; PROGRAM PROCESSORS; PROTEINS; RNA;

BIOINFORMATICS;

EID: 84869482261     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2382936.2382977     Document Type: Conference Paper

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