Assessment of genetic diversity in 35 Pisum sativum accessions using microsatellite markers

Canadian Journal of Plant Science

Volumn 92, Issue 6, 2012, Pages 1075-1081

  Ahmad, Sajjad ^a   Singh, Manjit ^a   Lamb Palmer, Neil Dylan ^a   Lefsrud, Mark ^a   Singh, Jaswinder ^a  

^a MCGILL UNIVERSITY   (Canada)

Author keywords

Field pea (Pisum spp.); Genetic diversity; Microsatellites; Simple sequence repeats

Indexed keywords

CULTIVAR; GENETIC MARKER; GENETIC VARIATION; GENOTYPE; GERMPLASM; LEGUME; POLYMORPHISM;

ACER; PISUM; PISUM SATIVUM;

EID: 84869419579     PISSN: 00084220     EISSN: 19181833     Source Type: Journal    
DOI: 10.4141/CJPS2011-261     Document Type: Article

References (33)

1. Baranger, A., Aubert, G., Arnau, G., Laine, A. L., Deniot, G., Potier, J., Weinachter, C., Lejeune-Henaut, I., Lallemand, J. and Burstin, J. 2004. Genetic diversity within Pisum sativum using protein-and PCR-based markers. Theor. Appl. Genet. 108: 1309-1321.
2. Becher, S. A., Steinmetz, K., Weising, K., Boury, S., Peltier, D., Renou, J. P., Kahl, G. and Wolff, K. 2000. Microsatellites for cultivar identification in Pelargonium. Theor. Appl. Genet. 101: 643-651.
3. Bohn, M., Utz, H. F. and Melchinger, A. E. 1999. Genetic similarities among winter wheat cultivars determined on the basis of RFLPs, AFLPs, and SSRs and their us for predicting progeny variance. Crop Sci. 39: 228-237.
4. Boye, J., Zare, F. and Pletch, A. 2010. Pulse proteins: Processing, characterization, functional properties and applications in food and feed. Food Res. Int. 43: 414-431.
5. Burstin, J., Deniot, G., Potier, J., Weinachter, C., Aubert, G. and Baranger, A. 2001. Microsatellite polymorphism in Pisum sativum. Plant Breed. 120: 311-317.
6. Choundhury, P. R., Tanveer, H. and Dixit, G. P. 2007. Identification and detection of genetic relatedness among important varieties of pea (Pisum sativum L.) grown in India. Genetica 130: 183-191.
7. Cieslarova, J., Smykal, P., Dockalova, Z., Hanacek, P., Prochazka, S., Hybl, M. and Griga, M. 2011. Molecular evidence of genetic diversity changes in pea (Pisum sativum L.) germplasm after long-term maintenance. Genet. Resour. Crop Evol. 58: 439-451.
8. Cupic, T., Tucak, M., Popovic, S., Bolaric, S., Grljusic, S. and Kozumplik, V. 2009. Genetic diversity of pea (Pisum sativum L.) genotypes assessed by pedigree, morphological and molecular data. J. Food Agric. Environ. 7: 343-348.
9. Ergul, A., Perez-Rivera, G., Soylemezoglu, G., Kazan, K. and Arroyo-Garcia, R. 2011. Genetic diversity in Anatolian wild grapes (Vitis vinifera subsp. sylvestris) estimated by SSR markers. Plant Genet. Resour. Charact. Util. 9: 375-383.
10. Gong, Y.-m., Xu, S.-c., Mao, W.-h., Hu, Q.-z., Zhang, G.-w., Ding, J. and Li, Y.-d. 2010. Developing new SSR markers from ESTs of pea (Pisum sativum L.). J. Zhejiang Univ. Science B 11: 702-707.
11. Hoey, B. K., Crowe, K. R., Jones, V. M. and Polans, N. O. 1996. A phylogenetic analysis of Pisum based on morphological characters, and allozyme and RAPD markers. Theor. Appl. Genet. 92: 92-100.
12. Kuleung, C., Baenziger, P. S., Kachman, S. D. and Dweikat, I. 2006. Evaluating the genetic diversity of triticale with wheat and rye SSR markers. Crop Sci. 46: 1692-1700.
13. Loridon, K., McPhee, K., Morin, J., Dubreuil, P., Pilet-Nayel, M. L., Aubert, G., Rameau, C., Baranger, A., Coyne, C., Lejeune-Henaut, I. and Burstin, J. 2005. Microsatellite marker polymorphism and mapping in pea (Pisum sativum L.). Theor. Appl. Genet. 111: 1022-1031.
14. Manjarrez-Sandoval, P., Carter, T. E., Webb, D. M. and Burton, J. W. 1997. RFLP genetic similarity estimates and coefficient of parentage as genetic variance predictors for soybean yield. Crop Sci. 37: 698-703.
15. Nasiri, J., Haghnazari, A. and Saba, J. 2009. Genetic diversity among varieties and wild species accessions of pea (Pisum sativum L.) based on SSR markers. Afr. J. Biotechnol. 8: 3405-3417.
16. Nelson, R. L. and Johnson, E. O. C. 2011. Registration of soybean germplasm line LG00-6313. J. Plant Registr. 5: 406-409.
17. Pascher, K., Macalka, S., Rau, D., Gollmann, G., Reiner, H., Glossl, J. and Grabherr, G. 2010. Molecular differentiation of commercial varieties and feral populations of oilseed rape (Brassica napus L.). BMC Evol. Biol. 10: 63.
18. Pejic, I., Ajmone-Marsan, P., Morgante, M., Kozumplick, V., Castiglioni, P., Taramino, G. and Motto, M. 1998. Comparative analysis of genetic similarity among maize inbred lines detected by RFLPs, RAPDs, SSRs, and AFLPs. Theor. Appl. Genet. 97: 1248-1255.
19. Powell, W., Machray, G. C. and Provan, J. 1996. Polymorphism revealed by simple sequence repeats. Trends Plant Sci. 1: 215-222.
20. Russell, J. R., Fuller, J. D., Macaulay, M., Hatz, B. G., Jahoor, A., Powell, W. and Waugh, R. 1997. Direct comparison of levels of genetic variation among barley accessions detected by RFLPs, AFLPs, SSRs and RAPDs. Theor. Appl. Genet. 95: 714-722.
21. Santalla, M., Amurrio, J. M. and De Ron, A. M. 2001. Food and feed potential breeding value of green, dry and vegetable pea germplasm. Can. J. Plant Sci. 81: 601-610.
22. Sarikamis, G., Yanmaz, R., Ermis, S., Bakir, M. and Yuksel, C. 2010. Genetic characterization of pea (Pisum sativum) germplasm from Turkey using morphological and SSR markers. Genet. Molec. Res. 9: 591-600.
23. Simioniuc, D., Uptmoor, R., Friedt, W. and Ordon, F. 2002. Genetic diversity and relationships among pea cultivars revealed by RAPDs and AFLPs. Plant Breed. 121: 429-435.
24. Singh, S., Tan, H-Q. and Singh, J. 2012. Mutagenesis of barley malting quality QTLs with Ds transposons. Funct. Integr. Genomics 12: 131-141.
25. Skrypetz, S. 2004. Dry peas: situation and outlook. Agriculture and Agri-Food Canada, Market Analysis Division. Biweekly Bull. 17: 1-10.
26. Smith, J. S. C., Kresovich, S., Hopkins, M. S., Mitchell, S. E., Dean, R. E., Woodman, W. L., Lee, M. and Porter, K. 2000. Genetic diversity among elite sorghum inbred lines assessed with simple sequence repeats. Crop Sci. 40: 226-232.
27. Smykal, P. 2006. Development of an efficient retrotransposonbased fingerprinting method for rapid pea variety identification. J. Appl. Genet. 47: 221-230.
28. Smykal, P., Horacek, J., Dostalova, R. and Hybl, M. 2008. Variety discrimination in pea (Pisum sativum L.) by molecular, biochemical and morphological markers. J. Appl. Genet. 49: 155-166.
29. Tan, H-Q. and Singh, J. 2011. High-efficiency thermal asymmetric interlaced (HE-TAIL) PCR for amplification of Ds transposons insertion sites in barley. J. Plant Mol. Biol. Biotechnol. 2: 9-14.
30. Tantasawat, P., Trongchuen, J., Prajongjai, T., Jenweerawat, S. and Chaowiset, W. 2011. SSR analysis of soybean (Glycine max (L.) Merr.) genetic relationship and variety identification in Thailand. Aust. J. Crop Sci. 5: 283-290.
31. Tar'an, B., Zhang, C., Warkentin, T., Tullu, A. and Vandenberg, A. 2005. Genetic diversity among varieties and wild species accessions of pea (Pisum sativum L.) based on molecular markers, and morphological and physiological characters. Genome 48: 257-272.
32. Temnykh, S., Park, W. D., Ayres, N., Cartinhour, S., Hauck, N., Lipovich, L., Cho, Y. G., Ishii, T. and McCouch, S. R. 2000. Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.). Theor. Appl. Genet. 100: 697-712.
33. Tessier, C., David, J., This, P., Boursiquot, J. M. and Charrier, A. 1999. Optimization of the choice of molecular markers for varietal identification in Vitis vinifera L. 98: 171-177.