Genome sequence of oscillibacter ruminantium strain GH1, isolated from rumen of korean native cattle

Journal of Bacteriology

Volumn 194, Issue 22, 2012, Pages 6362-

  Lee, Gun Hye ^a   Kumar, Sanjay ^a   Lee, Jong Hwan ^a   Chang, Dong Ho ^a   Kim, Dae Soo ^a   Choi, Sang Haeng ^a   Rhee, Moon Soo ^a   Lee, Dong Woo ^b   Yoon, Min Ho ^c   Kim, Byoung Chan ^a  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b Kyungpook National University   (South Korea)

^c Chungnam National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BUTYRIC ACID; GLYCOSIDASE;

ANAEROBE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM ISOLATION; CATTLE; GENE SEQUENCE; NONHUMAN; NOTE; OSCILLIBACTER RUMINANTIUM GH1; PRIORITY JOURNAL;

ANIMALS; BACTERIA; CATTLE; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA; REPUBLIC OF KOREA; RUMEN;

BOS; BOS TAURUS;

EID: 84869127187     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01677-12     Document Type: Note

References (7)

1. Aziz R, et al. 2008. The RAST Server: rapid annotations using subsystems technology. BMC Genomics 9:75.
2. Delcher AL, Harmon D, Kasif S, White O, Salzberg SL. 1999. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 27:4636-4641.
3. Iino T, Mori K, Tanaka K, Suzuki K, Harayama S. 2007. Oscillibacter valericigenes gen. nov., sp. nov., a valerate-producing anaerobic bacterium isolated from the alimentary canal of a Japanese corbicula clam. Int. J. Syst. Evol. Microbiol. 57:1840-1845.
4. Krause DO, et al. 2003. Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics. FEMS Microbiol. Rev. 27: 663-693.
5. Lagesen K, et al. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
6. Shanks OC, et al. 2011. Community structures of fecal bacteria in cattle from different animal feeding operations. Appl. Environ. Microbiol. 77:2992-3001.
7. Tatusov RL, et al. 2001. The COG database: new developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res. 29:22-28.