Genotypic change and phylogenetic analysis of porcine circovirus type 2 in Taiwanese pig herds

Journal of Veterinary Medical Science

Volumn 74, Issue 10, 2012, Pages 1303-1310

  Chiou, Ming Tang ^a   Lin, Chao Nan ^a   Yang, Cheng Yao ^b   Su, Guan Shiuan ^a   Lin, Chuen Fu ^c   Chang, Tsung Chou ^a  

^a NATIONAL PINGTUNG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Taiwan)

^b ANIMAL TECHNOLOGY INSTITUTE TAIWAN   (Taiwan)

^c CENTRAL TAIWAN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Taiwan)

Author keywords

Genotype; Open reading frame 2; Porcine circovirus type 2; Sequence analysis

Indexed keywords

VIRUS DNA;

AMINO ACID SEQUENCE; ANIMAL; ANIMAL DISEASE; ARTICLE; CHEMISTRY; CIRCOVIRIDAE INFECTION; CIRCOVIRUS; DNA SEQUENCE; FEMALE; GENETICS; GENOTYPE; MOLECULAR GENETICS; NEWBORN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PREVALENCE; SEQUENCE ALIGNMENT; SWINE; SWINE DISEASE; TAIWAN; VIROLOGY; WASTING SYNDROME;

AMINO ACID SEQUENCE; ANIMALS; ANIMALS, NEWBORN; BASE SEQUENCE; CIRCOVIRIDAE INFECTIONS; CIRCOVIRUS; DNA, VIRAL; FEMALE; GENOTYPE; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; PREVALENCE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SWINE; SWINE DISEASES; TAIWAN; WASTING SYNDROME;

PORCINE CIRCOVIRUS 2; SUIDAE;

EID: 84869077064     PISSN: 09167250     EISSN: 13477439     Source Type: Journal    
DOI: 10.1292/jvms.12-0044     Document Type: Article

References (39)

1. An, D. J., Roh, I. S., Song, D. S., Park, C. K. and Park, B. K. 2007. Phylogenetic characterization of porcine circovirus type 2 in PMWS and PDNS Korean pigs between 1999 and 2006. Virus Res. 129: 115-122. [Medline] [CrossRef]
2. Chae, J. S. and Choi, K. S. 2010. Genetic diversity of porcine circovirus type 2 from pigs in Republic of Korea. Res. Vet. Sci. 88: 333-338. [Medline] [CrossRef]
3. Chen, S. P., Weng, Y. J., Tsai, C. P., Chang, W. F., Li, N. J., Tsai, C. E. and Chiou, M. T. 2001. Case report: identification of pathogenic porcine circovirus in pigs with post-weaning multisystemic sasting syndrome in Taiwan. J. Clin. Soc. Vet. Sci 27: 251-255.
4. Cheung, A. K. 2003. Transcriptional analysis of porcine circovirus type 2. Virology 305: 168-180. [Medline] [CrossRef]
5. Cheung, A. K. and Greenlee, J. J. 2011. Identification of an amino acid domain encoded by the capsid gene of porcine circovirus type 2 that modulates intracellular viral protein distribution during replication. Virus Res. 155: 358-362. [Medline] [CrossRef]
6. Cheung, A. K., Lager, K. M., Kohutyuk, O. I., Vincent, A. L., Henry, S. C., Baker, R. B., Rowland, R. R. and Dunham, A. G. 2007. Detection of two porcine circovirus type 2 genotypic groups in United States swine herds. Arch. Virol. 152: 1035-1044. [Medline] [CrossRef]
7. Chiou, M. T., Su, P. C., Chuang, M. S. and Lin, C. N. 2004. Porcine circovirus type 2 infection status sick or moribund pigs in Taiwan. Taiwan Vet. J. 30: 163-168.
8. Ciacci-Zanella, J. R., Simon, N. L., Pinto, L. S., Viancelli, A., Fernandes, L. T., Hayashi, M., Dellagostin, O. A. and Esteves, P. A. 2009. Detection of porcine Circovirus type 2 (PCV2) variants PCV2-1 and PCV2-2 in Brazilian pig population. Res. Vet. Sci. 87: 157-160. [Medline] [CrossRef]
9. Cortey, M., Olvera, A., Grau-Roma, L. and Segales, J. 2011. Further comments on porcine circovirus type 2 (PCV2) genotype definition and nomenclature. Vet. Microbiol. 149: 522-523. [Medline] [CrossRef]
10. Cortey, M., Pileri, E., Sibila, M., Pujols, J., Balasch, M., Plana, J. and Segales, J. 2011. Genotypic shift of porcine circovirus type 2 from PCV-2a to PCV-2b in Spain from 1985 to 2008. Vet. J. 187: 363-368. [Medline] [CrossRef]
11. de Castro, A. M., Cortez, A., Heinemann, M. B., Brandao, P. E. and Richtzenhain, L. J. 2007. Genetic diversity of Brazilian strains of porcine circovirus type 2 (PCV-2) revealed by analysis of the cap gene (ORF-2). Arch. Virol. 152: 1435-1445. [Medline] [CrossRef]
12. Dupont, K., Nielsen, E. O., Baekbo, P. and Larsen, L. E. 2008. Genomic analysis of PCV2 isolates from Danish archives and a current PMWS case-control study supports a shift in genotypes with time. Vet. Microbiol. 128: 56-64. [Medline] [CrossRef]
13. Fort, M., Sibila, M., Allepuz, A., Mateu, E., Roerink, F. and Segales, J. 2008. Porcine circovirus type 2 (PCV2) vaccination of conventional pigs prevents viremia against PCV2 isolates of different genotypes and geographic origins. Vaccine 26: 1063-1071. [Medline] [CrossRef]
14. Gagnon, C. A., del Castillo, J. R., Music, N., Fontaine, G., Harel, J. and Tremblay, D. 2008. Development and use of a multiplex real-time quantitative polymerase chain reaction assay for detection and differentiation of Porcine circovirus-2 genotypes 2a and 2b in an epidemiological survey. J. Vet. Diagn. Invest. 20: 545-558. [Medline] [CrossRef]
15. Gagnon, C. A., Tremblay, D., Tijssen, P., Venne, M. H., Houde, A. and Elahi, S. M. 2007. The emergence of porcine circovirus 2b genotype (PCV-2b) in swine in Canada. Can. Vet. J. 48: 811-819. [Medline]
16. Grau-Roma, L., Crisci, E., Sibila, M., Lopez-Soria, S., Nofrarias, M., Cortey, M., Fraile, L., Olvera, A. and Segales, J. 2008. A proposal on porcine circovirus type 2 (PCV2) genotype definition and their relation with postweaning multisystemic wasting syndrome (PMWS) occurrence. Vet. Microbiol. 128: 23-35. [Medline] [CrossRef]
17. Guo, L. J., Lu, Y. H., Wei, Y. W., Huang, L. P. and Liu, C. M. 2010. Porcine circovirus type 2 (PCV2): genetic variation and newly emerging genotypes in China. Virol. J. 7: 273. [Medline] [CrossRef]
18. Jantafong, T., Boonsoongnern, A., Poolperm, P., Urairong, K., Lekcharoensuk, C. and Lekcharoensuk, P. 2011. Genetic characterization of porcine circovirus type 2 in piglets from PMWS-affected and-negative farms in Thailand. Virol. J. 8: 88. [Medline] [CrossRef]
19. Kim, D., Ha, Y., Oh, Y. and Chae, C. 2011. Prevalence of porcine circovirus types 2a and b in pigs with and without post-weaning multi-systemic wasting syndrome. Vet. J. 188: 115-117. [Medline] [CrossRef]
20. Kim, H. H., Park, S. I., Hyun, B. H., Park, S. J., Jeong, Y. J., Shin, D. J., Chun, Y. H., Hosmillo, M., Lee, B. J., Kang, M. I. and Cho, K. O. 2009. Genetic diversity of porcine circovirus type 2 in Korean pigs with postweaning multisystemic wasting syndrome during 2005-2007. J. Vet. Med. Sci. 71: 349-353. [Medline] [CrossRef]
21. Li, W., Wang, X., Ma, T., Feng, Z., Li, Y. and Jiang, P. 2010. Genetic analysis of porcine circovirus type 2 (PCV2) strains isolated between 2001 and 2009: genotype PCV2b predominate in postweaning multisystemic wasting syndrome occurrences in eastern China. Virus Genes 40: 244-251. [Medline] [CrossRef]
22. Liu, J., Chen, I. and Kwang, J. 2005. Characterization of a previously unidentified viral protein in porcine circovirus type 2-infected cells and its role in virus-induced apoptosis. J. Virol. 79: 8262-8274. [Medline] [CrossRef]
23. Lyoo, K. S., Kim, H. B. and Joo, H. S. 2008. Evaluation of a nested polymerase chain reaction assay to differentiate between two genotypes of Porcine circovirus-2. J. Vet. Diagn. Invest. 20: 283-288. [Medline] [CrossRef]
24. Nawagitgul, P., Harms, P. A., Morozov, I., Thacker, B. J., Sorden, S. D., Lekcharoensuk, C. and Paul, P. S. 2002. Modified indirect porcine circovirus (PCV) type 2-based and recombinant capsid protein (ORF2)-based enzyme-linked immunosorbent assays for detection of antibodies to PCV. Clin. Diagn. Lab. Immunol. 9: 33-40. [Medline]
25. Nawagitgul, P., Morozov, I., Bolin, S. R., Harms, P. A., Sorden, S. D. and Paul, P. S. 2000. Open reading frame 2 of porcine circovirus type 2 encodes a major capsid protein. J. Gen. Virol. 81: 2281-2287. [Medline]
26. Olvera, A., Cortey, M. and Segales, J. 2007. Molecular evolution of porcine circovirus type 2 genomes: phylogeny and clonality. Virology 357: 175-185. [Medline] [CrossRef]
27. Opriessnig, T., Meng, X. J. and Halbur, P. G. 2007. Porcine circovirus type 2 associated disease: update on current terminology, clinical manifestations, pathogenesis, diagnosis, and intervention strategies. J. Vet. Diagn. Invest. 19: 591-615. [Medline] [CrossRef]
28. Opriessnig, T., Ramamoorthy, S., Madson, D. M., Patterson, A. R., Pal, N., Carman, S., Meng, X. J. and Halbur, P. G. 2008. Differences in virulence among porcine circovirus type 2 isolates are unrelated to cluster type 2a or 2b and prior infection provides heterologous protection. J. Gen. Virol. 89: 2482-2491. [Medline] [CrossRef]
29. Perez, L. J., Diaz de Arce, H. and Frias, M. T. 2010. Genetic characterization and phylogenetic analysis of porcine circovirus type 2 strains present in Cuban swine herds. Res. Vet. Sci. 89: 301-305. [Medline] [CrossRef]
30. Reiner, G., Bronnert, B., Hohloch, C., Reinacher, M. and Willems, H. 2011. Distribution of ORF2 and ORF3 genotypes of porcine circovirus type 2 (PCV-2) in wild boars and domestic pigs in Germany. Vet. Microbiol. 148: 372-376. [Medline] [CrossRef]
31. Segales, J., Olvera, A., Grau-Roma, L., Charreyre, C., Nauwynck, H., Larsen, L., Dupont, K., McCullough, K., Ellis, J., Krakowka, S., Mankertz, A., Fredholm, M., Fossum, C., Timmusk, S., Stockhofe-Zurwieden, N., Beattie, V., Armstrong, D., Grassland, B., Baekbo, P. and Allan, G. 2008. PCV-2 genotype definition and nomenclature. Vet. Rec. 162: 867-868. [Medline] [CrossRef]
32. Takahagi, Y., Nishiyama, Y., Toki, S., Yonekita, T., Morimatsu, F. and Murakami, H. 2008. Genotypic change of porcine circovirus type 2 on Japanese pig farms as revealed by restriction fragment length polymorphism analysis. J. Vet. Med. Sci. 70: 603-606. [Medline] [CrossRef]
33. Timmusk, S., Wallgren, P., Brunborg, I. M., Wikstrom, F. H., Allan, G., Meehan, B., McMenamy, M., McNeilly, F., Fuxler, L., Belak, K., Podersoo, D., Saar, T., Berg, M. and Fossum, C. 2008. Phylogenetic analysis of porcine circovirus type 2 (PCV2) pre-and post-epizootic postweaning multisystemic wasting syndrome (PMWS). Virus Genes 36: 509-520. [Medline] [Cross-Ref]
34. Tischer, I., Gelderblom, H., Vettermann, W. and Koch, M. A. 1982. A very small porcine virus with circular single-stranded DNA. Nature 295: 64-66. [Medline] [CrossRef]
35. Tischer, I., Mields, W., Wolff, D., Vagt, M. and Griem, W. 1986. Studies on epidemiology and pathogenicity of porcine circovirus. Arch. Virol. 91: 271-276. [Medline] [CrossRef]
36. Trible, B. R., Kerrigan, M., Crossland, N., Potter, M., Faaberg, K., Hesse, R. and Rowland, R. R. 2011. Antibody recognition of porcine circovirus type 2 capsid protein epitopes after vaccination, infection and disease. Clin. Vaccine Immunol. 18: 749-757. [Medline] [CrossRef]
37. Vlasakova, M., Jackova, A. and Vilcek, S. 2011. Genetic typing of porcine circovirus type 2 (PCV-2) isolates from Slovakia. Res. Vet. Sci. 90: 168-173. [Medline] [CrossRef]
38. Wang, F., Guo, X., Ge, X., Wang, Z., Chen, Y., Cha, Z. and Yang, H. 2009. Genetic variation analysis of Chinese strains of porcine circovirus type 2. Virus Res. 145: 151-156. [Medline] [Cross-Ref]
39. Wiederkehr, D. D., Sydler, T., Buergi, E., Haessig, M., Zimmermann, D., Pospischil, A., Brugnera, E. and Sidler, X. 2009. A new emerging genotype subgroup within PCV-2b dominates the PMWS epizooty in Switzerland. Vet. Microbiol. 136: 27-35. [Medline] [CrossRef]