Identification of a functional type IA topoisomerase, Ld TopIIIβ, from kinetoplastid parasite Leishmania donovani

Enzyme Research

Volumn 2011, Issue 1, 2011, Pages

  Banerjee, Bijoylaxmi ^a   Sen, Nilkantha ^b   Majumder, Hemanta K ^a  

^a INDIAN INSTITUTE OF CHEMICAL BIOLOGY   (India)

^b JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; BACTERIAL ENZYME; DNA TOPOISOMERASE; DNA TOPOISOMERASE III BETA; TYROSINE; UNCLASSIFIED DRUG;

ARTICLE; CARBOXY TERMINAL SEQUENCE; CELL NUCLEUS; CONTROLLED STUDY; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME LOCALIZATION; FUNGUS GROWTH; GENETIC COMPLEMENTATION; GENETIC CONSERVATION; IN VIVO STUDY; KINETOPLAST; LEISHMANIA DONOVANI; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DEPLETION; PROTEIN FUNCTION; SACCHAROMYCES CEREVISIAE; SPECIES CONSERVATION;

BACTERIA (MICROORGANISMS); EUKARYOTA; KINETOPLASTIDA; LEISHMANIA DONOVANI;

EID: 84869037911     PISSN: 20900406     EISSN: 20900414     Source Type: Journal    
DOI: 10.4061/2011/230542     Document Type: Article

References (33)

1. Hsiang Y. H., Hertzberg R., Hecht S., Liu L. F., Camptothecin induces protein-linked DNA breaks via mammalian DNA topoisomerase I. Journal of Biological Chemistry 1985 260 27 14873 14878 2-s2.0-0022340594 (Pubitemid 16211028)
2. Wang J. C., Cellular roles of DNA topoisomerases: a molecular perspective. Nature Reviews Molecular Cell Biology 2002 3 6 430 440 10.1038/nrm831 (Pubitemid 34685700)
3. Wang J. C., DNA topoisomerases. Annual Review of Biochemistry 1996 65 635 692 (Pubitemid 26250622)
4. Champoux J. J., DNA topoisomerases: structure, function, and mechanism. Annual Review of Biochemistry 2001 70 369 413 2-s2.0-0034923502 10.1146/annurev.biochem.70.1.369 (Pubitemid 32662215)
5. Champoux J. J., Dulbecco R., An activity from mammalian cells that untwists superhelical DNA-a possible swivel for DNA replication (polyoma-ethidium bromide-mouse-embryo cells-dye binding assay). Proceedings of the National Academy of Sciences of the United States of America 1972 69 1 143 146 2-s2.0-0015262632
6. 3 gene product as a single strand-specific DNA topoisomerase. Journal of Biological Chemistry 1992 267 24 17178 17185 2-s2.0-0026795617
7. Tse-Dinh Y. C., Wang J. C., Complete nucleotide sequence of the topA gene encoding Escherichia coli DNA topoisomerase I. Journal of Molecular Biology 1986 191 3 321 331 2-s2.0-0022978355 (Pubitemid 17187232)
8. DiGate R. J., Marians K. J., Identification of a potent decatenating enzyme from Escherichia coli. Journal of Biological Chemistry 1988 263 26 13366 13373 2-s2.0-0023712287
9. DiGate R. J., Marians K. J., Molecular cloning and DNA sequence analysis of Escherichia coli topB, the gene encoding topoisomerase III. Journal of Biological Chemistry 1989 264 30 17924 17930 2-s2.0-0024441516 (Pubitemid 19279259)
10. Pastorcic M., Ph.D. thesis 1982 University of Chicago
11. Srivenugopal K. S., Lockshon D., Morris D. R., Escherichia coli DNA topoisomerase III: purification and characterization of a new type I enzyme. Biochemistry 1984 23 9 1899 1906 2-s2.0-0021769843
12. Goodwin A., Wang S. W., Toda T., Norbury C., Hickson I. D., Topoisomerase III is essential for accurate nuclear division in Schizosaccharomyces pombe. Nucleic Acids Research 1999 27 20 4050 4058 2-s2.0-0033570217 10.1093/nar/27.20.4050 (Pubitemid 29479032)
13. Oh M., Choi I. S., Park S. D., Topoisomerase III is required for accurate DNA replication and chromosome segregation in Schizosaccharomyces pombe. Nucleic Acids Research 2002 30 18 4022 4031 2-s2.0-0037106455
14. Wallis J. W., Chrebet G., Brodsky G., Rolfe M., Rothstein R., A hyper-recombination mutation in S. cerevisiae identifies a novel eukaryotic topoisomerase. Cell 1989 58 2 409 419 2-s2.0-0024324482 (Pubitemid 19191422)
15. Chakraverty R. K., Kearsey J. M., Oakley T. J., Grenon M., De La Torre Ruiz M. A., Lowndes N. F., Hickson I. D., Topoisomerase III acts upstream of Rad53p in the S-phase DNA damage checkpoint. Molecular and Cellular Biology 2001 21 21 7150 7162 2-s2.0-0034785830 10.1128/MCB.21.21.7150-7162.2001 (Pubitemid 32953469)
16. 3: a single-copy gene encoding DNA topoisomerase III. Proceedings of the National Academy of Sciences of the United States of America 1996 93 8 3653 3657 2-s2.0-0029986401 10.1073/pnas.93.8.3653 (Pubitemid 26127594)
17. Seki T., Seki M., Onodera R., Katada T., Enomoto T., Cloning of cDNA encoding a novel mouse DNA topoisomerase III (topo III β) possessing negatively supercoiled DNA relaxing activity, whose message is highly expressed in the testis. Journal of Biological Chemistry 1998 273 44 28553 28556 2-s2.0-0032582667 10.1074/jbc.273.44.28553 (Pubitemid 28507534)
18. Goulaouic H., Roulon T., Flamand O., Grondard L., Lavelle F., Riou J. F., Purification and characterization of human DNA topoisomerase III α Nucleic Acids Research 1999 27 12 2443 2450 2-s2.0-0033564431 10.1093/nar/27.12.2443 (Pubitemid 29271789)
19. Wilson T. M., Chen A. D., Hsieh T. S., Cloning and characterization of Drosophila topoisomerase III β. Relaxation of hypernegatively supercoiled DNA. Journal of Biological Chemistry 2000 275 3 1533 1540 2-s2.0-0034695630 10.1074/jbc.275.3.1533 (Pubitemid 30060765)
20. Li W., Wang J. C., Mammalian DNA topoisomerase III α is essential in early embryogenesis. Proceedings of the National Academy of Sciences of the United States of America 1998 95 3 1010 1013 10.1073/pnas.95.3.1010 (Pubitemid 28124903)
21. Kwan K. Y., Wang J. C., jcwang@fas.harvard.edu Mice lacking DNA topoisomerase III β develop to maturity but show a reduced mean lifespan. Proceedings of the National Academy of Sciences of the United States of America 2001 98 10 5717 5721 10.1073/pnas.101132498
22. Kwan K. Y., Moens P. B., Wang J. C., Infertility and aneuploidy in mice lacking a type IA DNA topoisomerase III β Proceedings of the National Academy of Sciences of the United States of America 2003 100 5 2526 2531 2-s2.0-0344838431 10.1073/pnas.0437998100 (Pubitemid 36297532)
23. Das B. B., Sengupta T., Ganguly A., Majumder H. K., Topoisomerases of kinetoplastid parasites: why so fascinating? Molecular Microbiology 2006 62 4 917 927 2-s2.0-33750491962 10.1111/j.1365-2958.2006.05428.x (Pubitemid 44655308)
24. Scocca J. R., Shapiro T. A., A mitochondrial topoisomerase IA essential for late theta structure resolution in African trypanosomes. Molecular Microbiology 2008 67 4 820 829 2-s2.0-38449123072 10.1111/j.1365-2958.2007. 06087.x (Pubitemid 351143685)
25. Kim H.-S., Cross G. A. M., TOPO3 α inlfluences antigenic variation by monitoring expression-site-associated VSG switching in Trypanosoma brucei. PLoS Pathogens 2010 6 7 e1000992
26. Kapler G. M., Coburn C. M., Beverley S. M., Stable transfection of the human parasite Leishmania major delineates a 30-kilobase region sufficient for extrachromosomal replication and expression. Molecular and Cellular Biology 1990 10 3 1084 1094 2-s2.0-0025122367
27. Vernet T., Dignard D., Thomas D. Y., A family of yeast expression vectors containing the phage f1 intergenic region. Gene 1987 52 2-3 225 233 2-s2.0-0023275830 (Pubitemid 17090751)
28. Chen D.-C., Yang B.-C., Kuo T.-T., One-step transformation of yeast in stationary phase. Current Genetics 1992 21 1 83 84
29. Ng S. W., Liu Y., Hasselblatt K. T., Mok S. C., Berkowitz R. S., A new human topoisomerase III that interacts with SGS1 protein. Nucleic Acids Research 1999 27 4 993 1000 2-s2.0-0033557311 10.1093/nar/27.4.993 (Pubitemid 29209501)
30. Zhang H. L., DiGate R. J., The carboxyl-terminal residues of Escherichia coli DNA topoisomerase III are involved in substrate binding. Journal of Biological Chemistry 1994 269 12 9052 9059 2-s2.0-0028240122 (Pubitemid 24209226)
31. Gangloff S., De Massy B., Lane A., Rothstein R., Fabre F., The essential role of yeast topoisomerase III in meiosis depends on recombination. The EMBO Journal 1999 18 6 1701 1711 2-s2.0-0033559694 (Pubitemid 29127081)
32. Wilson-Sali T., Hsieh T. S., Preferential cleavage of plasmid-based R-loops and D-loops by Drosophila topoisomerase III β Proceedings of the National Academy of Sciences of the United States of America 2002 99 12 7974 7979 2-s2.0-0037062474 10.1073/pnas.122007999 (Pubitemid 34650990)
33. Harmon F. G., DiGate R. J., Kowalczykowski S. C., RecQ helicase and topoisomerase III comprise a novel DNA strand passage function: a conserved mechanism for control of DNA recombination. Molecular Cell 1999 3 5 611 620 2-s2.0-0033031935 10.1016/S1097-2765(00)80354-8 (Pubitemid 29268444)