메뉴 건너뛰기




Volumn 5, Issue , 2012, Pages

Association studies of the copy-number variable β-defensin cluster on 8p23.1 in adenocarcinoma and chronic pancreatitis

Author keywords

Chronic pancreatitis; Copy number variation; Defensins; Pancreatic ductal adenocarcinoma; Single nucleotide variants

Indexed keywords

MAIZE STREAK VIRUS;

EID: 84868663935     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-5-629     Document Type: Article
Times cited : (14)

References (45)
  • 1
    • 79952655306 scopus 로고    scopus 로고
    • Managing acute and chronic pancreatitis
    • 22 21306035
    • Managing acute and chronic pancreatitis. Skipworth JR, Shankar A, Pereira SP, Practitioner 2010 254 23 27 22 21306035
    • (2010) Practitioner , vol.254 , pp. 23-27
    • Skipworth, J.R.1    Shankar, A.2    Pereira, S.P.3
  • 2
    • 0028905980 scopus 로고
    • Development of chronic pancreatitis from acute pancreatitis: A pathogenetic concept
    • 7778338
    • Development of chronic pancreatitis from acute pancreatitis: a pathogenetic concept. Kloppel G, Maillet B, Zentralbl Chir 1995 120 274 277 7778338
    • (1995) Zentralbl Chir , vol.120 , pp. 274-277
    • Kloppel, G.1    Maillet, B.2
  • 6
    • 77955664182 scopus 로고    scopus 로고
    • Clinical presentation and waiting time targets do not affect prognosis in patients with pancreatic cancer
    • 10.1016/j.surge.2010.03.001 20709279
    • Clinical presentation and waiting time targets do not affect prognosis in patients with pancreatic cancer. Raptis DA, Fessas C, Belasyse-Smith P, Kurzawinski TR, Surgeon 2010 8 239 246 10.1016/j.surge.2010.03.001 20709279
    • (2010) Surgeon , vol.8 , pp. 239-246
    • Raptis, D.A.1    Fessas, C.2    Belasyse-Smith, P.3    Kurzawinski, T.R.4
  • 7
    • 78751677985 scopus 로고    scopus 로고
    • Immunology: Peptide gets in shape for self-defence
    • 10.1038/469309a 21248835
    • Immunology: Peptide gets in shape for self-defence. Lehrer RI, Nature 2011 469 309 310 10.1038/469309a 21248835
    • (2011) Nature , vol.469 , pp. 309-310
    • Lehrer, R.I.1
  • 8
    • 21344443115 scopus 로고    scopus 로고
    • Antimicrobial peptides in lung inflammation
    • 15976488
    • Antimicrobial peptides in lung inflammation. Beisswenger C, Bals R, Chem Immunol Allergy 2005 86 55 71 15976488
    • (2005) Chem Immunol Allergy , vol.86 , pp. 55-71
    • Beisswenger, C.1    Bals, R.2
  • 9
    • 80051552897 scopus 로고    scopus 로고
    • Beta-defensins: What are they REALLY doing in the oral cavity?
    • 10.1111/j.1601-0825.2011.01799.x 21332602
    • Beta-defensins: what are they REALLY doing in the oral cavity? Diamond G, Ryan L, Oral Dis 2011 17 7 628 635 10.1111/j.1601-0825.2011.01799.x 21332602
    • (2011) Oral Dis , vol.17 , Issue.7 , pp. 628-635
    • Diamond, G.1    Ryan, L.2
  • 10
    • 77649237880 scopus 로고    scopus 로고
    • Antimicrobial peptides: General overview and clinical implications in human health and disease
    • 10.1016/j.clim.2009.12.004 20116332
    • Antimicrobial peptides: general overview and clinical implications in human health and disease. Guani-Guerra E, Santos-Mendoza T, Lugo-Reyes SO, Teran LM, Clin Immunol 2010 135 1 11 10.1016/j.clim.2009.12.004 20116332
    • (2010) Clin Immunol , vol.135 , pp. 1-11
    • Guani-Guerra, E.1    Santos-Mendoza, T.2    Lugo-Reyes, S.O.3    Teran, L.M.4
  • 11
    • 34748890084 scopus 로고    scopus 로고
    • The role of cathelicidin and defensins in pulmonary inflammatory diseases
    • 10.1517/14712598.7.9.1449 17727333
    • The role of cathelicidin and defensins in pulmonary inflammatory diseases. Herr C, Shaykhiev R, Bals R, Expert Opin Biol Ther 2007 7 1449 1461 10.1517/14712598.7.9.1449 17727333
    • (2007) Expert Opin Biol Ther , vol.7 , pp. 1449-1461
    • Herr, C.1    Shaykhiev, R.2    Bals, R.3
  • 12
    • 62549137023 scopus 로고    scopus 로고
    • Copy number variation of beta-defensins and relevance to disease
    • 10.1159/000184702 19287149
    • Copy number variation of beta-defensins and relevance to disease. Hollox EJ, Cytogenet Genome Res 2008 123 148 155 10.1159/000184702 19287149
    • (2008) Cytogenet Genome Res , vol.123 , pp. 148-155
    • Hollox, E.J.1
  • 13
    • 63449139717 scopus 로고    scopus 로고
    • Gene expression of human beta-defensins in healthy and inflamed human dental pulps
    • 10.1016/j.joen.2008.12.015 19345797
    • Gene expression of human beta-defensins in healthy and inflamed human dental pulps. Paris S, Wolgin M, Kielbassa AM, Pries A, Zakrzewicz A, J Endod 2009 35 520 523 10.1016/j.joen.2008.12.015 19345797
    • (2009) J Endod , vol.35 , pp. 520-523
    • Paris, S.1    Wolgin, M.2    Kielbassa, A.M.3    Pries, A.4    Zakrzewicz, A.5
  • 14
    • 0042387792 scopus 로고    scopus 로고
    • Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster
    • 10.1086/378157 12916016
    • Extensive normal copy number variation of a beta-defensin antimicrobial-gene cluster. Hollox EJ, Armour JA, Barber JC, Am J Hum Genet 2003 73 591 600 10.1086/378157 12916016
    • (2003) Am J Hum Genet , vol.73 , pp. 591-600
    • Hollox, E.J.1    Armour, J.A.2    Barber, J.C.3
  • 15
    • 25444457773 scopus 로고    scopus 로고
    • Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence
    • 10.1186/1471-2164-5-92 15588320
    • Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence. Taudien S, Galgoczy P, Huse K, Reichwald K, Schilhabel M, Szafranski K, Shimizu A, Asakawa S, Frankish A, Loncarevic IF, et al. BMC Genomics 2004 5 92 10.1186/1471-2164-5-92 15588320
    • (2004) BMC Genomics , vol.5 , pp. 92
    • Taudien, S.1    Galgoczy, P.2    Huse, K.3    Reichwald, K.4    Schilhabel, M.5    Szafranski, K.6    Shimizu, A.7    Asakawa, S.8    Frankish, A.9    Loncarevic, I.F.10
  • 18
    • 79959237605 scopus 로고    scopus 로고
    • A worldwide analysis of beta-defensin copy number variation suggests recent selection of a high-expressing DEFB103 gene copy in East Asia
    • 10.1002/humu.21491 21387465
    • A worldwide analysis of beta-defensin copy number variation suggests recent selection of a high-expressing DEFB103 gene copy in East Asia. Hardwick RJ, Machado LR, Zuccherato LW, Antolinos S, Xue Y, Shawa N, Gilman RH, Cabrera L, Berg DE, Tyler-Smith C, et al. Hum Mutat 2011 32 743 750 10.1002/humu.21491 21387465
    • (2011) Hum Mutat , vol.32 , pp. 743-750
    • Hardwick, R.J.1    MacHado, L.R.2    Zuccherato, L.W.3    Antolinos, S.4    Xue, Y.5    Shawa, N.6    Gilman, R.H.7    Cabrera, L.8    Berg, D.E.9    Tyler-Smith, C.10
  • 19
    • 77950954883 scopus 로고    scopus 로고
    • Haplotyping and copy number estimation of the highly polymorphic human beta-defensin locus on 8p23 by 454 amplicon sequencing
    • 10.1186/1471-2164-11-252 20403190
    • Haplotyping and copy number estimation of the highly polymorphic human beta-defensin locus on 8p23 by 454 amplicon sequencing. Taudien S, Groth M, Huse K, Petzold A, Szafranski K, Hampe J, Rosenstiel P, Schreiber S, Platzer M, BMC Genomics 2010 11 252 10.1186/1471-2164-11-252 20403190
    • (2010) BMC Genomics , vol.11 , pp. 252
    • Taudien, S.1    Groth, M.2    Huse, K.3    Petzold, A.4    Szafranski, K.5    Hampe, J.6    Rosenstiel, P.7    Schreiber, S.8    Platzer, M.9
  • 20
    • 79955970571 scopus 로고    scopus 로고
    • Comprehensive assessment of sequence variation within the copy number variable defensin cluster on 8p23 by target enriched in-depth 454 sequencing
    • 10.1186/1471-2164-12-243 21592371
    • Comprehensive assessment of sequence variation within the copy number variable defensin cluster on 8p23 by target enriched in-depth 454 sequencing. Taudien S, Szafranski K, Felder M, Groth M, Huse K, Raffaelli F, Petzold A, Zhang X, Rosenstiel P, Hampe J, et al. BMC Genomics 2011 12 243 10.1186/1471-2164-12-243 21592371
    • (2011) BMC Genomics , vol.12 , pp. 243
    • Taudien, S.1    Szafranski, K.2    Felder, M.3    Groth, M.4    Huse, K.5    Raffaelli, F.6    Petzold, A.7    Zhang, X.8    Rosenstiel, P.9    Hampe, J.10
  • 22
    • 3543040014 scopus 로고    scopus 로고
    • Complex SNP-related sequence variation in segmental genome duplications
    • 10.1038/ng1401 15247918
    • Complex SNP-related sequence variation in segmental genome duplications. Fredman D, White SJ, Potter S, Eichler EE, Den Dunnen JT, Brookes AJ, Nat Genet 2004 36 861 866 10.1038/ng1401 15247918
    • (2004) Nat Genet , vol.36 , pp. 861-866
    • Fredman, D.1    White, S.J.2    Potter, S.3    Eichler, E.E.4    Den Dunnen, J.T.5    Brookes, A.J.6
  • 23
    • 33847390726 scopus 로고    scopus 로고
    • Accurate, high-throughput typing of copy number variation using paralogue ratios from dispersed repeats
    • 10.1093/nar/gkl1089 17175532
    • Accurate, high-throughput typing of copy number variation using paralogue ratios from dispersed repeats. Armour JA, Palla R, Zeeuwen PL, den Heijer M, Schalkwijk J, Hollox EJ, Nucleic Acids Res 2007 35 19 10.1093/nar/gkl1089 17175532
    • (2007) Nucleic Acids Res , vol.35 , pp. 519
    • Armour, J.A.1    Palla, R.2    Zeeuwen, P.L.3    Den Heijer, M.4    Schalkwijk, J.5    Hollox, E.J.6
  • 24
    • 10844248472 scopus 로고    scopus 로고
    • Detection of aneuploidies by paralogous sequence quantification
    • 10.1136/jmg.2004.023184 15591276
    • Detection of aneuploidies by paralogous sequence quantification. Deutsch S, Choudhury U, Merla G, Howald C, Sylvan A, Antonarakis SE, J Med Genet 2004 41 908 915 10.1136/jmg.2004.023184 15591276
    • (2004) J Med Genet , vol.41 , pp. 908-915
    • Deutsch, S.1    Choudhury, U.2    Merla, G.3    Howald, C.4    Sylvan, A.5    Antonarakis, S.E.6
  • 25
    • 0031045298 scopus 로고    scopus 로고
    • Rapid detection of trisomy 21 by homologous gene quantitative PCR (HGQ-PCR)
    • 10.1007/s004390050373 9050924
    • Rapid detection of trisomy 21 by homologous gene quantitative PCR (HGQ-PCR). Lee HH, Chang JG, Lin SP, Chao HT, Yang ML, Ng HT, Hum Genet 1997 99 364 367 10.1007/s004390050373 9050924
    • (1997) Hum Genet , vol.99 , pp. 364-367
    • Lee, H.H.1    Chang, J.G.2    Lin, S.P.3    Chao, H.T.4    Yang, M.L.5    Ng, H.T.6
  • 26
    • 3543023204 scopus 로고    scopus 로고
    • Relative quantification of 40 nucleic acid sequences by multiplex ligation-dependent probe amplification
    • 10.1093/nar/gnf056 12060695
    • Relative quantification of 40 nucleic acid sequences by multiplex ligation-dependent probe amplification. Schouten JP, McElgunn CJ, Waaijer R, Zwijnenburg D, Diepvens F, Pals G, Nucleic Acids Res 2002 30 57 10.1093/nar/gnf056 12060695
    • (2002) Nucleic Acids Res , vol.30 , pp. 557
    • Schouten, J.P.1    McElgunn, C.J.2    Waaijer, R.3    Zwijnenburg, D.4    Diepvens, F.5    Pals, G.6
  • 27
    • 78649479154 scopus 로고    scopus 로고
    • Measurement methods and accuracy in copy number variation: Failure to replicate associations of beta-defensin copy number with Crohn's disease
    • 10.1093/hmg/ddq411 20858604
    • Measurement methods and accuracy in copy number variation: failure to replicate associations of beta-defensin copy number with Crohn's disease. Aldhous MC, Abu Bakar S, Prescott NJ, Palla R, Soo K, Mansfield JC, Mathew CG, Satsangi J, Armour JA, Hum Mol Genet 2010 19 4930 4938 10.1093/hmg/ddq411 20858604
    • (2010) Hum Mol Genet , vol.19 , pp. 4930-4938
    • Aldhous, M.C.1    Abu Bakar, S.2    Prescott, N.J.3    Palla, R.4    Soo, K.5    Mansfield, J.C.6    Mathew, C.G.7    Satsangi, J.8    Armour, J.A.9
  • 28
    • 77953363607 scopus 로고    scopus 로고
    • Comparison of multiplex ligation-dependent probe amplification and real-time PCR accuracy for gene copy number quantification using the beta-defensin locus
    • 10.2144/000113300 20041854
    • Comparison of multiplex ligation-dependent probe amplification and real-time PCR accuracy for gene copy number quantification using the beta-defensin locus. Perne A, Zhang X, Lehmann L, Groth M, Stuber F, Book M, Biotechniques 2009 47 1023 1028 10.2144/000113300 20041854
    • (2009) Biotechniques , vol.47 , pp. 1023-1028
    • Perne, A.1    Zhang, X.2    Lehmann, L.3    Groth, M.4    Stuber, F.5    Book, M.6
  • 29
    • 77952974727 scopus 로고    scopus 로고
    • Increased genomic copy number of DEFA1/DEFA3 is associated with susceptibility to severe sepsis in Chinese Han population
    • 10.1097/ALN.0b013e3181d968eb 20502117
    • Increased genomic copy number of DEFA1/DEFA3 is associated with susceptibility to severe sepsis in Chinese Han population. Chen Q, Hakimi M, Wu S, Jin Y, Cheng B, Wang H, Xie G, Ganz T, Linzmeier RM, Fang X, Anesthesiology 2010 112 1428 1434 10.1097/ALN.0b013e3181d968eb 20502117
    • (2010) Anesthesiology , vol.112 , pp. 1428-1434
    • Chen, Q.1    Hakimi, M.2    Wu, S.3    Jin, Y.4    Cheng, B.5    Wang, H.6    Xie, G.7    Ganz, T.8    Linzmeier, R.M.9    Fang, X.10
  • 30
    • 67651100418 scopus 로고    scopus 로고
    • Dysregulation of human beta-defensin-2 protein in inflammatory bowel disease
    • 10.1371/journal.pone.0006285 19617917
    • Dysregulation of human beta-defensin-2 protein in inflammatory bowel disease. Aldhous MC, Noble CL, Satsangi J, PLoS One 2009 4 6285 10.1371/journal.pone.0006285 19617917
    • (2009) PLoS One , vol.4 , pp. 56285
    • Aldhous, M.C.1    Noble, C.L.2    Satsangi, J.3
  • 34
    • 28044437971 scopus 로고    scopus 로고
    • Cardiovascular disease, risk factors and heart rate variability in the elderly general population: Design and objectives of the CARdiovascular disease, Living and Ageing in Halle (CARLA) Study
    • 10.1186/1471-2261-5-33 16283930
    • Cardiovascular disease, risk factors and heart rate variability in the elderly general population: design and objectives of the CARdiovascular disease, Living and Ageing in Halle (CARLA) Study. Greiser KH, Kluttig A, Schumann B, Kors JA, Swenne CA, Kuss O, Werdan K, Haerting J, BMC Cardiovasc Disord 2005 5 33 10.1186/1471-2261-5-33 16283930
    • (2005) BMC Cardiovasc Disord , vol.5 , pp. 33
    • Greiser, K.H.1    Kluttig, A.2    Schumann, B.3    Kors, J.A.4    Swenne, C.A.5    Kuss, O.6    Werdan, K.7    Haerting, J.8
  • 37
    • 74949144690 scopus 로고    scopus 로고
    • Epidemiology of pancreatic cancer: An overview
    • 10.1038/nrgastro.2009.177 19806144
    • Epidemiology of pancreatic cancer: an overview. Raimondi S, Maisonneuve P, Lowenfels AB, Nat Rev Gastroenterol Hepatol 2009 6 699 708 10.1038/nrgastro.2009.177 19806144
    • (2009) Nat Rev Gastroenterol Hepatol , vol.6 , pp. 699-708
    • Raimondi, S.1    Maisonneuve, P.2    Lowenfels, A.B.3
  • 38
    • 77949957568 scopus 로고    scopus 로고
    • Pancreatitis in inflammatory bowel diseases
    • 10.1097/MCG.0b013e3181cadbe1 20087199
    • Pancreatitis in inflammatory bowel diseases. Pitchumoni CS, Rubin A, Das K, J Clin Gastroenterol 2010 44 246 253 10.1097/MCG.0b013e3181cadbe1 20087199
    • (2010) J Clin Gastroenterol , vol.44 , pp. 246-253
    • Pitchumoni, C.S.1    Rubin, A.2    Das, K.3
  • 39
    • 76349116970 scopus 로고    scopus 로고
    • Beta-defensins and Crohn's disease: Confusion from counting copies
    • 10.1038/ajg.2009.573 20139874
    • Beta-defensins and Crohn's disease: confusion from counting copies. Hollox EJ, Am J Gastroenterol 2010 105 360 362 10.1038/ajg.2009.573 20139874
    • (2010) Am J Gastroenterol , vol.105 , pp. 360-362
    • Hollox, E.J.1
  • 40
    • 33846673312 scopus 로고    scopus 로고
    • Alcoholic pancreatitis: Mechanisms of viral infections as cofactors in the development of acute and chronic pancreatitis and fibrosis
    • 10.1189/jlb.1004622 17095612
    • Alcoholic pancreatitis: mechanisms of viral infections as cofactors in the development of acute and chronic pancreatitis and fibrosis. Jerrells TR, Vidlak D, Strachota JM, J Leukoc Biol 2007 81 430 439 10.1189/jlb.1004622 17095612
    • (2007) J Leukoc Biol , vol.81 , pp. 430-439
    • Jerrells, T.R.1    Vidlak, D.2    Strachota, J.M.3
  • 42
    • 2442689246 scopus 로고    scopus 로고
    • Inflammatory mechanisms contributing to pancreatic cancer development
    • discussion 769-771 10.1097/01.sla.0000128681.76786.07 15166955
    • Inflammatory mechanisms contributing to pancreatic cancer development. Farrow B, Sugiyama Y, Chen A, Uffort E, Nealon W, Mark Evers B, Ann Surg 2004 239 763 769 discussion 769-771 10.1097/01.sla.0000128681.76786.07 15166955
    • (2004) Ann Surg , vol.239 , pp. 763-769
    • Farrow, B.1    Sugiyama, Y.2    Chen, A.3    Uffort, E.4    Nealon, W.5    Mark Evers, B.6
  • 43
    • 0037180757 scopus 로고    scopus 로고
    • Inflammation and cancer
    • 10.1038/nature01322 12490959
    • Inflammation and cancer. Coussens LM, Werb Z, Nature 2002 420 860 867 10.1038/nature01322 12490959
    • (2002) Nature , vol.420 , pp. 860-867
    • Coussens, L.M.1    Werb, Z.2
  • 44
    • 75849147159 scopus 로고    scopus 로고
    • Defensins as anti-inflammatory compounds and mucosal adjuvants
    • 10.2217/fmb.09.104 20020832
    • Defensins as anti-inflammatory compounds and mucosal adjuvants. Kohlgraf KG, Pingel LC, Dietrich DE, Brogden KA, Future Microbiol 2010 5 99 113 10.2217/fmb.09.104 20020832
    • (2010) Future Microbiol , vol.5 , pp. 99-113
    • Kohlgraf, K.G.1    Pingel, L.C.2    Dietrich, D.E.3    Brogden, K.A.4
  • 45
    • 0141799911 scopus 로고    scopus 로고
    • Defensins: Antimicrobial peptides of innate immunity
    • 10.1038/nri1180 12949495
    • Defensins: antimicrobial peptides of innate immunity. Ganz T, Nat Rev Immunol 2003 3 710 720 10.1038/nri1180 12949495
    • (2003) Nat Rev Immunol , vol.3 , pp. 710-720
    • Ganz, T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.