Differential diagnosis of lung carcinoma with three-dimensional quantitative molecular vibrational imaging

Journal of Biomedical Optics

Volumn 17, Issue 6, 2012, Pages

  Gao, Liang ^a,b   Hammoudi, Ahmad A ^a,c   Li, Fuhai ^a   Thrall, Michael J ^a   Cagle, Philip T ^a   Chen, Yuanxin ^a   Yang, Jian ^a   Xia, Xiaofeng ^a   Fan, Yubo ^a   Massoud, Yehia ^c   Wang, Zhiyong ^a   Wong, Stephen T C ^a,c  

^a WEILL CORNELL MEDICAL COLLEGE   (United States)

^b Chroma Technology   (United States)

^c Rice University   (United States)

Author keywords

Artificial intelligence; Lung cancer; Microscopy; Non linear diagnostic imaging; Non near optics

Indexed keywords

COLLAGEN; LAMININ; MATRIGEL; PROTEOGLYCAN;

ALGORITHM; ANIMAL; ARTICLE; AUTOMATED PATTERN RECOGNITION; BAGG ALBINO MOUSE; CALIBRATION; CHEMISTRY; DIFFERENTIAL DIAGNOSIS; DRUG COMBINATION; FEMALE; HUMAN; LUNG NON SMALL CELL CANCER; LUNG TUMOR; METHODOLOGY; MOUSE; NUDE MOUSE; ONCOLOGY; OPTICS; PATHOLOGY; REPRODUCIBILITY; THREE DIMENSIONAL IMAGING; TUMOR CELL LINE;

ALGORITHMS; ANIMALS; CALIBRATION; CARCINOMA, NON-SMALL-CELL LUNG; CELL LINE, TUMOR; COLLAGEN; DIAGNOSIS, DIFFERENTIAL; DRUG COMBINATIONS; FEMALE; HUMANS; IMAGING, THREE-DIMENSIONAL; LAMININ; LUNG NEOPLASMS; MEDICAL ONCOLOGY; MICE; MICE, INBRED BALB C; MICE, NUDE; OPTICS AND PHOTONICS; PATTERN RECOGNITION, AUTOMATED; PROTEOGLYCANS; REPRODUCIBILITY OF RESULTS;

EID: 84868661010     PISSN: 10833668     EISSN: 15602281     Source Type: Journal    
DOI: 10.1117/1.JBO.17.6.066017     Document Type: Article

References (52)

1. D. M. Parkin et al., "Global cancer statistics, 2002," Ca-Cancer J. Clin. 55(2), 74-108 (2005). (Pubitemid 40372904)
2. D. R. Youlden, S. M. Cramb, and P. D. Baade, "The international epidemiology of lung cancer: geographical distribution and secular trends," J. Thorac. Oncol. 3(8), 819-831 (2008).
3. P. S. Shenkin, B. Erman, and L. D. Mastrandrea, " Informationtheoretical entropy as a measure of sequence variability," Proteins 11(4), 297-313 (1991).
4. P. T. Cagle et al., "Revolution in lung cancer: new challenges for the surgical pathologist," Arch. Pathol. Lab. Med. 135(1), 110-116 (2011).
5. M. Maemondo et al., "Gefitinib or chemotherapy for non-small-cell lung cancer with mutated EGFR," N. Engl. J. Med. 362(25), 2380-2388 (2010).
6. T. Mitsudomi et al., "Gefitinib versus cisplatin plus docetaxel in patients with non-small-cell lung cancer harbouring mutations of the epidermal growth factor receptor (WJTOG3405): an open label, randomised phase 3 trial," Lancet Oncol. 11(2), 121-128 (2010).
7. T. S. Mok et al., "Gefitinib or carboplatin-paclitaxel in pulmonary adenocarcinoma," N. Engl. J. Med. 361(10), 947-957 (2009).
8. M. H. Cohen et al., "FDA drug approval summary: bevacizumab (Avastin) plus Carboplatin and Paclitaxel as first-line treatment of advanced/ metastatic recurrent nonsquamous non-small cell lung cancer," Oncologist 12(6), 713-718 (2007). (Pubitemid 47036205)
9. D. H. Johnson et al., "Randomized phase II trial comparing bevacizumab plus carboplatin and paclitaxel with carboplatin and paclitaxel alone in previously untreated locally advanced or metastatic nonsmall- cell lung cancer," J. Clin. Oncol. 22(11), 2184-2191 (2004). (Pubitemid 41095154)
10. P. S. Loo et al., "Subtyping of undifferentiated non-small cell carcinomas in bronchial biopsy specimens," J. Thorac. Oncol. 5(4), 442-447 (2010).
11. W. D. Travis et al., "International association for the study of lung cancer/American thoracic society/European respiratory society international multidisciplinary classification of lung adenocarcinoma," J. Thorac. Oncol. 6(2), 244-285 (2011).
12. C. I. Henschke, "Early lung cancer action project: overall design and findings from baseline screening," Cancer 89(S11), 2474-2482 (2000).
13. F. Levi et al., "Trends in mortality from major cancers in the European Union, including acceding countries, in 2004," Cancer 101(12), 2843-2850 (2004). (Pubitemid 39603193)
14. M. D. Duncan, J. Reintjes, and T. J. Manuccia, "Imaging biological compounds using the coherent anti-Stokes Raman scattering microscope," Opt. Eng. 24, 352-355 (1985). (Pubitemid 15494454)
15. M. D. Duncan, J. Reintjes, and T. J. Manuccia, "Scanning coherent anti- Stokes Raman microscope," Opt. Lett. 7, 350-352 (1982).
16. C. L. Evans and X. S. Xie, "Coherent anti-Stokes Raman scattering microscopy: chemical imaging for biology and medicine," Annu. Rev. Anal. Chem. 1, 883-909 (2008).
17. C. L. Evans, E. O. Potma, and X. S. Xie, "Coherent anti-Stokes Raman scattering spectral interferometry: determination of the real and imaginary components of nonlinear susceptibility chi(3) for vibrational microscopy," Opt. Lett. 29(24), 2923-2925 (2004). (Pubitemid 40011269)
18. M. Muller and A. Zumbusch, "Coherent anti-Stokes Raman scattering microscopy," ChemPhysChem 8(15), 2156-2170 (2007).
19. J.-X. Cheng and X. S. Xie, "Coherent anti-Stokes Raman scattering microscopy: instrumentation, theory, and applications," J. Phys. Chem. B 108(3), 827-840 (2004).
20. C. L. Evans et al., "Chemical imaging of tissue in vivo with video-rate coherent anti-Stokes Raman scattering microscopy," Proc. Natl. Acad. Sci. USA 102(46), 16807-16812 (2005). (Pubitemid 41688858)
21. C. L. Evans et al., "Chemically-selective imaging of brain structures with CARS microscopy," Opt. Express 15(19), 12076-12087 (2007). (Pubitemid 47460072)
22. J. X. Cheng et al., "Laser-scanning coherent anti-Stokes Raman scattering microscopy and applications to cell biology," Biophys. J. 83(1), 502-509 (2002).
23. Y. Yang et al., "Differential diagnosis of breast cancer using quantitative, label-free and molecular vibrational imaging," Biomed. Opt. Express 2(8), 2160-2174 (2011).
24. L. Gao et al., "On-the-spot lung cancer differential diagnosis by labelfree, molecular vibrational imaging and knowledge-based classification," J. Biomed. Opt. 16(9), 096004 (2011).
25. L. Gao et al., "Diagnosing lung cancer using coherent anti-Stokes Raman scattering microscopy," in Proc. SPIE 7890, 789015 (2011).
26. L. Gao et al., "Label-free high-resolution imaging of prostate glands and cavernous nerves using coherent anti-Stokes Raman scattering microscopy," Biomed. Opt. Express 2(4), 915-926 (2011).
27. Y. Yang et al., "Label-free imaging of human breast tissues using coherent anti-Stokes Raman scattering microscopy," Proc. SPIE 7903, 79032G (2011).
28. J. Terry et al., "Optimal immunohistochemical markers for distinguishing lung adenocarcinomas from squamous cell carcinomas in small tumor samples," Am. J. Surg. Pathol. 34(12), 1805-1811 (2010).
29. C. J. Langer et al., "The evolving role of histology in the management of advanced non-small-cell lung cancer," J. Clin. Oncol. 28(36), 5311-5320 (2010).
30. W. Denk, J. H. Strickler, and W. W. Webb, "Two-photon laser scanning fluorescence microscopy," Science 248(4951), 73-76 (1990).
31. J. Hartigan and M. Wong, "Algorithm AS 136: aK-means clustering algorithm," J. Royal Stat. Soc. C (Appl. Stat.) 28(1), 100-108 (1979).
32. T. Moon, "The expectation-maximization algorithm," IEEE Signal Process. Mag. 13(6), 47-60 (1996). (Pubitemid 126518983)
33. R. Achanta et al., "Slic superpixels," Technical Report 149300 EPFL (2010).
34. A. Lucchi et al., "Supervoxel-based segmentation of EM image stacks with learned shape feature," in EPFL TECHNICAL REPORT (2010).
35. Z. Wang et al., "Delivery of picosecond lasers in multimode fibers for coherent anti-Stokes Raman scattering imaging," Opt. Express 18(12), 13017-13028 (2010).
36. X. Ren and J. Malik, "Learning a classification model for segmentation," in Ninth IEEE Int. Conf. on Computer Vision, Nice, France, p. 10, Springer-Verlag, Berlin, Heidelberg (2003).
37. A. A. Hammoudi et al., "Automated nuclear segmentation of coherent anti-Stokes Raman scattering microscopy images by coupling superpixel context information with artificial neural networks," in Proc. Second Int. Conf. on Machine Learning in Medical Imaging, Toronto, Canada, Springer-Verlag (2011).
38. A. Radhakrishna et al., "SLIC Superpixels," Technical Report 149300, EPFL (June, 2010).
39. A. Levinshtein et al., "Turbopixels: fast superpixels using geometric flows. Pattern analysis and machine intelligence," IEEE Trans. Pattern Anal. Mach. Intell. 31(12), 2290-2297 (2009).
40. X. Ren and J. Malik, "Learning a classification model for segmentation," In: "Computer Vision" in Proc. Ninth IEEE Int. Conf., pp. 10-17 (2003).
41. Y. Xu et al., "Capacity-constrained Delaunay triangulation for point distributions," Comput. Graph. 35(3), 510-516 (2011).
42. F. Li et al., "Multiple nuclei tracking using integer programming for quantitative cancer cell cycle analysis," IEEE Trans. Med. Imag. 29(10), 96-105 (2010).
43. F. Li, X. Zhou, and T. C. S. Wong, "Optimal live cell tracking for cell cycle study using time-lapse fluorescent microscopy images," in Int. Workshop on Machine Learning in Medical Imaging (MLMI 2010), pp. 124-131, Springer Lecture Notes in Computer Science, Beijing, China (2010).
44. A. Laga et al., "Adenocarcinoma," in Color Atlas and Text of Pulmonary Pathology, 2nd ed., pp. 31-41, Lippincott Williams & Wilkins, Philadelphia, PA (2008).
45. E. Zeren et al., "Squamous-cell carcinoma," in Color Atlas and Text of Pulmonary Pathology, 2nd ed., pp. 42-46, Lippincott Williams & Wilkins, Philadelphia, PA (2008).
46. V. Kumar et al., Eds., Pathologic Basis of Disease, 8th ed., Saunders, Philadelphia, PA (2009).
47. B. G. Saar et al., "Coherent Raman scanning fiber endoscopy," Opt. Lett. 36(13), 2396-2398 (2011).
48. M. Balu et al., "Fiber delivered probe for efficient CARS imaging of tissues," Opt. Express 18(3), 2380-2388 (2010).
49. F. Legare et al., "Towards CARS Endoscopy," Opt. Express 14(10), 4427-4432 (2006). (Pubitemid 43727632)
50. Z. Wang et al., "Coherent anti-Stokes Raman scattering microscopy imaging with suppression of four-wave mixing in optical fibers," Opt. Express 19(9), 7960-7970 (2011).
51. Z.Wang et al., "Use of multimode optical fibers for fiber-based coherent anti-Stokes Raman scattering microendoscopy imaging," Opt. Lett. 36(15), 2967-2969 (2011).
52. Z. Wang et al., "Delivery of picosecond lasers in multimode fibers for coherent anti-Stokes Raman scattering imaging," Opt. Express 18(12), 13017-13028 (2010).