Draft genome sequence of an extremely drug-resistant KPC- producing Klebsiella pneumoniae ST258 epidemic strain

Journal of Bacteriology

Volumn 194, Issue 21, 2012, Pages 6014-

  Chmelnitsky, I ^a   Doniger, T ^b   Shklyar, M ^a   Naparstek, L ^a,b   Banin, E ^b   Edgar, R ^a   Carmeli, Y ^a  

^a TEL AVIV SOURASKY MEDICAL CENTER   (Israel)

^b BAR ILAN UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

CARBAPENEMASE; CONTIG; RIBOSOME RNA; TRANSFER RNA;

ANTIBIOTIC RESISTANCE; BACTERIAL GENOME; BACTERIAL STRAIN; CLONE; GENE MAPPING; GENE SEQUENCE; ISRAEL; KLEBSIELLA PNEUMONIAE; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OPERON; PLASMID; PRIORITY JOURNAL; RNA GENE; SEQUENCE ANALYSIS;

ANTI-BACTERIAL AGENTS; BACTERIAL PROTEINS; BETA-LACTAMASES; DNA, BACTERIAL; DRUG RESISTANCE, MULTIPLE, BACTERIAL; GENOME, BACTERIAL; HUMANS; ISRAEL; KLEBSIELLA INFECTIONS; KLEBSIELLA PNEUMONIAE; MOLECULAR SEQUENCE DATA; SEQUENCE ANALYSIS, DNA;

KLEBSIELLA PNEUMONIAE;

EID: 84868627233     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01546-12     Document Type: Note

References (7)

1. Delcher AL, Harmon D, Kasif S, White O, Salzberg SL. 1999. Improved microbial gene identification with Glimmer. Nucleic Acids Res. 27:4636-4641.
2. García-Fernández A, et al. 2012. Klebsiella pneumoniae ST258 producing KPC-3 identified in Italy carries novel plasmids and OmpK36/OmpK35 porin variants. Antimicrob. Agents Chemother. 56:2143-2145.
3. Hidron AI, et al. 2008. NHSN annual update: antimicrobial-resistant pathogens associated with healthcare-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007. Infect. Control Hosp. Epidemiol. 29:996-1011.
4. Leavitt A, Chmelnitsky I, Carmeli Y, Navon-Venezia S. 2010. Complete nucleotide sequence of KPC-3-encoding plasmid pKpQIL in the epidemic Klebsiella pneumoniae sequence type 258. Antimicrob. Agents Chemother. 54:4493-4496.
5. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
6. Salzberg S, Delcher A, Kasif S, White O. 1998. Microbial gene identification using interpolated Markov models. Nucleic Acids Res. 26:544-548.
7. Wu KM, et al. 2009. Genome sequencing and comparative analysis of Klebsiella pneumoniae NTUH-K2044, a strain causing liver abscess and meningitis. J. Bacteriol. 191:4492-4501.