Genetic diversity in Eucommia ulmoides (Eucommiaceae), an endangered traditional Chinese medicinal plant

Conservation Genetics

Volumn 13, Issue 6, 2012, Pages 1499-1507

  Yao, Xiaohong ^a   Deng, Jianyun ^a   Huang, Hongwen ^a,b  

^a Wuhan Institute of Botany Chinese Academy of Sciences   (China)

^b SOUTH CHINA INSTITUTE OF BOTANY   (China)

Author keywords

Conservation; Domestication and cultivation; E. ulmoides; Genetic diversity; Medicinal plant

Indexed keywords

CONSERVATION GENETICS; CULTIVATION; DIOECY; DOMESTICATION; ENDANGERED SPECIES; EXPLOITATION; GENETIC MARKER; GENETIC RESOURCE; GENETIC VARIATION; HUMAN ACTIVITY; ISOLATION EFFECT; MEDICINAL PLANT; SPECIES CONSERVATION; VARIANCE ANALYSIS;

EUCOMMIA ULMOIDES; EUCOMMIACEAE;

EID: 84868593888     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-012-0393-3     Document Type: Article

References (41)

1. Bohonak AJ (2002) IBD (Isolation by Distance): a program for analyses of isolation by distance. J Hered 93: 153-154.
2. Call VB, Dilcher DL (1997) The fossil record of Eucommia (Eucommiaceae) in North America. Am J Bot 84: 798-814.
3. Chinese Pharmacopoeia Committee of Ministry of Health of the People's Republic of China (1990) Chinese pharmacopoeia. People's Medical Publishing House and Chemical Industry Press, Beijing, p 131.
4. Coart E, Vekemans X, Smulders MJM, Wagner I, van Huylenbroeck J, van Bockstaele E, Roldan-Ruiz I (2003) Genetic variation in the endangered wild apple (Malus sylvestris (L.) Mill.) in Belgium as revealed by amplified fragment length polymorphism and microsatellite markers. Mol Ecol 12: 845-857.
5. Cronquist A (1981) An integrated system of classification of flowering plants. Columbia University Press, New York.
6. Deng JY, Li JQ, Huang HW (2007) Discovery of an originally wild tree of Eucommia ulmoides Oliver by AFLP fingerprinting. J Wuhan Bot Res 24: 509-513.
7. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19: 11-15.
8. Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
9. Frankham R, Ballou JD, Briscoe DA (2002) Introduction to conservation genetics. Cambridge University Press, Cambridge.
10. Fu LG, Jin JM (1992) Red list of endangered plants in China. Science Press, Beijing.
11. Gomes V, Collevatti RG, Silveira FAO, Fernandes GW (2004) The distribution of genetic variability in Baccharis concinna (Asteraceae), an endemic, dioecious and threatened shrub of rupestrian fields of Brazil. Conserv Genet 5: 157-165.
12. Gu JT (1998) Conservation of plant diversity in China: achievements, and concerns. Biol Conserv 85: 321-327.
13. Guo HB, Lu BR, Wu QH, Chen JK, Zhou TS (2007) Abundant genetic diversity in cultivated Codonopsis pilosula populations revealed by RAPD polymorphisms. Genet Resour Crop Evol 54: 917-924.
14. Hamilton AC (2004) Medicinal plants, conservation and livelihoods. Biodivers Conserv 13: 1477-1517.
15. Hamrick JL, Godt JW (1996) Effects of life history traits on genetic diversity in plant species. Philos Trans R Soc Lond B Biol Sci 351: 1291-1298.
16. Hancock JF (2004) Plant evolution and the origin of crop species. CABI Publishing, Cambridge.
17. Hollingsworth PM, Dawson IK, Goodall-Copestake WP, Richardson JE, Weber JC, Sotelo-Montes C, Pennington RT (2005) Do farmers reduce genetic diversity when they domesticate tropical trees? A case study from Amazonia. Mol Ecol 14: 497-501.
18. Holsinger KE, Lewis PO (2003) HICKORY: a package for analysis of population genetic data V1. 0. http://www. eeb. uconn. edu. Accessed 15 Oct 2005.
19. Holsinger KE, Lewis PO, Dey DK (2002) A Bayesian approach to inferring population structure from dominant markers. Mol Ecol 11: 1157-1164.
20. Huang LQ, Yang B, Wang M, Fu GF (1999) An approach to some problems on utilization of medicinal plant resources in China. China J Mater Med 24: 70-73.
21. Huang XQ, Börner A, Röder MS, Ganal MW (2002) Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers. Theor Appl Genet 105: 699-707.
22. Hyten D, Song Q, Zhu Y, Choi IY, Nelson RL, Costa JM, Specht JE, Shoemaker RC, Cregan PB (2006) Impacts of genetic bottlenecks on soybean genome diversity. Proc Natl Acad Sci USA 103: 16666-16671.
23. Kang M, Xu FH, Lowe A, Huang HW (2007) Protecting evolutionary significant units for the remnant populations of Berchemiella wilsonii var. pubipetiolata (Rhamnaceae). Conserv Genet 8: 465-473.
24. Mabberley DJ (1989) The plant book. Cambridge University Press, Cambridge.
25. Meudt HM, Clarke AC (2007) Almost forgotten or latest practice? AFLP applications, analyses and advances. Trends Ecol Evol 12: 106-117.
26. Miller AJ, Schaal BA (2006) Domestication and the distribution of genetic variation in wild and cultivated populations of the Mesoamerican fruit tree Spondias purpurea L. (Anacardiaceae). Mol Ecol 15: 1467-1480.
27. Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 70: 3321-3323.
28. Olden JD, Poff NL, Douglas MR, Douglas ME, Fausch KD (2004) Ecological and evolutionary consequences of biotic homogenization. Trends Ecol Evol 19: 18-24.
29. Petit RJ, Duminil J, Fineschi S, Hampe A, Salvini D, Vendramin G (2005) Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Mol Ecol 14: 689-701.
30. Pons Q, Petit RJ (1996) Measuring and testing genetic differentiation with ordered versus unordered alleles. Genetics 144: 1237-1245.
31. Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
32. Provan J, Powell W, Hollingsworth PM (2001) Chloroplast microsatellites: new tools for studies in plant ecology and evolution. Trends Ecol Evol 16: 142-147.
33. Sanguinetti CJ, Neto ED, Simpson AJG (1994) Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. Biotechniques 17: 914-921.
34. Schneider S, Roessli D, Excoffier L (2000) ARLEQUIN, Version 2. 0: a software for population genetics data analysis. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Switzerland.
35. Vos P, Hogers R, Bleeker M, Reijans M, Lee TVD, Hornes M, Frijters A, Pot J, Peieman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23: 4407-4414.
36. Wang YF, Li CS, Collinson ME, Lin J, Sun QG (2003) Eucommia (Eucomiaceae), a potential biothermometer for the reconstruction of paleoenvironments. Am J Bot 90: 1-7.
37. Wang AQ, Huang LQ, Shao AJ, Cui GH, Chen M, Tong CH (2006) Genetic diversity of Eucommia ulmoides by RAPD analysis. China J Chinese Mater Med 31: 1583-1586 (in Chinese with English abstract).
38. Weising K, Gardner RC (1999) A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms. Genome 42: 9-19.
39. Yeh FC, Yang R, Boyle TJ, Xiyan JM (2000) PopGene32, Microsoft Window-based freeware for population genetic analysis, version 1. 32. Molecular Biology and Biotechnology Centre, University of Alberta, Edmonton.
40. Zhang Z, Zhang H, Turland NJ (2003) Eucommiaceae. In: Flora of China Editorial Committee (eds) Flora of China, vol 9. Science Press, Beijing, p 49.
41. Zhou ZX (1993) Eucommia ulmoides of China. Guizhou Science and Technology Press, Guiyang.