Anti-idiotypic monobodies for immune response profiling

Methods

Volumn 58, Issue 1, 2012, Pages 62-68

  Sullivan, Mark A ^a   Wentworth, Tim ^a   Kobie, James J ^a   Sanz, Ignacio ^a  

^a UNIVERSITY OF ROCHESTER SCHOOL OF MEDICINE AND DENTISTRY   (United States)

Author keywords

Autoantibodies; Mimotopes; Phage display; Scaffold protein

Indexed keywords

ANTIBODY; ANTIIDIOTYPIC ANTIBODY; CORTICOSTEROID; FIBRONECTIN; IMMUNOGLOBULIN; METHOTREXATE;

ANTIBODY BLOOD LEVEL; ARTICLE; AUTOIMMUNE DISEASE; BINDING AFFINITY; BIOPANNING; CLINICAL ARTICLE; CLINICAL ASSESSMENT; CONTROLLED STUDY; CORTICOSTEROID THERAPY; DIAGNOSTIC TEST ACCURACY STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; HUMAN; HUMAN CELL; IMMUNE RESPONSE; IMMUNOGLOBULIN BLOOD LEVEL; IMMUNOREACTIVITY; MOLECULAR LIBRARY; MOLECULAR PROBE; PATIENT SELECTION; PHAGE DISPLAY; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN STABILITY; RANDOMIZATION; RHEUMATOID ARTHRITIS; SENSITIVITY AND SPECIFICITY; SERUM;

AMINO ACID SEQUENCE; ANTIBODIES, ANTI-IDIOTYPIC; ANTIBODY SPECIFICITY; ANTIGENS; ARTHRITIS, RHEUMATOID; AUTOANTIBODIES; CELL SURFACE DISPLAY TECHNIQUES; ENZYME-LINKED IMMUNOSORBENT ASSAY; EPITOPES; FIBRONECTINS; HEK293 CELLS; HUMANS; IMMUNOGLOBULIN G; MOLECULAR MIMICRY; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; PEPTIDE LIBRARY; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY;

EID: 84868357443     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2012.07.009     Document Type: Article

References (36)

1. Cantaert T., De Rycke L., Bongartz T., Matteson E.L., et al. Arthritis Rheum 2006, 54:3381-3389.
2. Koenig M., Fritzler M.J., Targoff I.N., Troyanov Y., Senecal J.L. J. L. Arthritis Res. Ther. 2007, 9:R78.
3. Robert-Pachot M., Desbos A., Moreira A., Becchi M., et al. Autoimmunity 2007, 40:380-389.
4. Dinser R., Braun A., Jendro M.C., Engel A. Scand J. Rheumatol. 2007, 36:448-451.
5. Bizzaro N. Autoimmun. Rev. 2007, 6:325-333.
6. Chatterjee M., Mohapatra S., Ionan A., Bawa G., et al. Cancer Res. 2006, 66:1181-1190.
7. Lin H.S., Talwar H.S., Tarca A.L., Ionan A., Chatterjee M., et al. Cancer Epidemiol. Biomarkers Prev. 2007, 16:2396-2405.
8. Somers V., Govarts C., Somers K., Hupperts R., Medaer R., Stinissen P. J. Immunol. 2008, 180:3957-3963.
9. Kalnina Z., Silina K., Meistere I., Zayakin P., Rivoshet A. J. Immunol. Methods 2008, 334:37-50.
10. Papini A.M. J. Pept. Sci. 2009, 15:621-628.
11. Irving M.B., Craig L., Menendez A., Gangadhar B.P., Montero M., et al. Mol. Immunol. 2010, 47:1137-1148.
12. Koide A., Bailey C.W., Huang X., Koide S. J. Mol. Biol. 1998, 284:1141-1151.
13. Koide A., Koide S. Methods Mol. Biol. 2007, 352:95-109.
14. Barbas C.F., Burton D.R., Scott J.K., Silverman G.J. Phage Display: A Laboratory Manual 2001, Cold Spring Harbor Laboratory Press, New York.
15. Haidaris C.G., Malone J., Sherrill L.A., Bliss J.M., et al. J. Immunol. Methods 2001, 257:185-202.
16. Shea C., Bloedorn L., Sullivan L.M.A. J. Struct. Funct. Genomics 2005, 6:171-175.
17. Barbas C.F., Collet T.A., Amberg W., Roben P., Binley J.M., et al. J. Mol. Biol. 1993, 230:812-823.
18. Walker L.M., Phogat S.K., Chan-Hui P.Y., Wagner D., Phung P., et al. Science 2009, 326:285-289.
19. Zwick M.B., Jensen R., Church S., Wang M., Stiegler G., et al. J. Virol. 2005, 79:1252-1261.
20. Herold M., Boeser V., Russe E., Klotz W. Clin. Dev. Immunol. 2005, 12:131-135.
21. Sebbag M., Simon M., Vincent C., Masson-Bessiere C., Girbal E., et al. J. Clin. Invest. 1995, 95:2672-2679.
22. Girbal-Neuhauser E., Durieux J.J., Arnaud M., Dalbon P., Sebbag M., et al. J. Immunol. 1999, 162:585-594.
23. Dejaco C., Klotz W., Larcher H., Duftner C., Schirmer M., Herold M., Arthritis M. Res. Ther. 2006, 8:R119.
24. Kunkel T.A., Roberts J.D., Zakour R.A. Methods Enzymol. 1987, 154:367-382.
25. Tonikian R., Zhang Y., Boone C., Sidhu S.S. Nat. Protoc. 2007, 2:1368-1386.
26. Broders O., Breitling F., Dubel S. Methods Mol. Biol. 2003, 205:295-302.
27. Zwick M.B., Parren P.W., Saphire E.O., Church S., Wang M., et al. J. Virol. 2003, 77:5863-5876.
28. Zwick M.B., Bonnycastle L.L., Menendez A., Irving M.B., et al. J. Virol. 2001, 75:6692-6699.
29. Saphire E.O., Montero M., Menendez A., van Houten N.E., Irving M.B., et al. J. Mol. Biol. 2007, 369:696-709.
30. Leidinger P., Keller A., Ludwig N., Rheinhammer S., Hamacher J., et al. Int. J. Cancer 2008, 123:1631-1636.
31. Zhong L., Peng X., Hidalgo G.E., Doherty D.E., et al. Proteomics 2004, 4:12-16-1225.
32. Siddiqui A.H., Irani R.A., Blackwell S.C., Ramin S.M., Kellems R.E., Xia Y. Hypertension 2010, 55:386-393.
33. Cleutjens K.B., Faber B.C., Rousch M., van Doorn R., et al. J. Clin. Invest. 2008, 118:2979-2985.
34. Oak S., Gilliam L.K., Landin-Olsson M., Torn C., Kockum I., et al. Proc. Natl. Acad. Sci. USA 2008, 105:5471-5476.
35. Metzker M.L. Nat. Rev. Genet. 2010, 11:31-46.
36. t'Hoen P.A.C., Jirka S.M.G., ten Broeke B.R., Schultes E.A., Aguilera B., Pang K.H., et al. Anal. Biochem. 2012, 421:622-631.