Analyzing protein-protein interactions from affinity purification-mass spectrometry data with SAINT

Current Protocols in Bioinformatics

Volumn , Issue SUPPL.39, 2012, Pages

  Choi, Hyungwon ^a   Liu, Guomin ^b   Mellacheruvu, Dattatreya ^c   Tyers, Mike ^d,e   Gingras, Anne Claude ^b,f   Nesvizhskii, Alexey I ^c  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^b MOUNT SINAI HOSPITAL   (Canada)

^c UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

^d INSTITUTE FOR RESEARCH IN IMMUNOLOGY AND CANCER   (Canada)

^e UNIVERSITY OF EDINBURGH   (United Kingdom)

^f UNIVERSITY OF TORONTO   (Canada)

Author keywords

Affinity purification mass spectrometry (AP MS); Label free quantitative proteomics; Protein protein interactions; statistical model

Indexed keywords

AFFINITY PURIFICATION MASS SPECTROMETRY; ARTICLE; COMPUTER; COMPUTER NETWORK; COMPUTER PROGRAM; EXPERIMENTAL DESIGN; MASS SPECTROMETRY; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; SIGNIFICANCE ANALYSIS OF INTERACTOME; AFFINITY CHROMATOGRAPHY; BINDING SITE; CHEMISTRY; METABOLISM; METHODOLOGY; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEOMICS;

PROTEIN;

BINDING SITES; CHROMATOGRAPHY, AFFINITY; DATABASES, PROTEIN; MASS SPECTROMETRY; PROTEIN INTERACTION MAPPING; PROTEINS; PROTEOMICS; SOFTWARE;

EID: 84868357292     PISSN: 19343396     EISSN: 1934340X     Source Type: Journal    
DOI: 10.1002/0471250953.bi0815s39     Document Type: Article

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