-
1
-
-
0038699591
-
High-throughput classification of yeast mutants for functional genomics using metabolic footprinting
-
Allen, J., Davey, H. M., Broadhurst, D., Heald, J. K., Rowland, J. J., Oliver, S. G., et al. (2003). High-throughput classification of yeast mutants for functional genomics using metabolic footprinting. Nature Biotechnology, 21, 692-696.
-
(2003)
Nature Biotechnology
, vol.21
, pp. 692-696
-
-
Allen, J.1
Davey, H.M.2
Broadhurst, D.3
Heald, J.K.4
Rowland, J.J.5
Oliver, S.G.6
-
2
-
-
61849165638
-
Environmental metabolomics: a critical review and future perspectives
-
doi:10.1007/s11306-008-0152-0
-
Bundy, J., Davey, M., & Viant, M. (2009). Environmental metabolomics: a critical review and future perspectives. Metabolomics, 5, 3-21. doi: 10. 1007/s11306-008-0152-0.
-
(2009)
Metabolomics
, vol.5
, pp. 3-21
-
-
Bundy, J.1
Davey, M.2
Viant, M.3
-
3
-
-
77956328401
-
Metabolic profiling and the metabolome-wide association study: significance level for biomarker identification
-
doi:10.1021/pr1003449
-
Chadeau-Hyam, M., Ebbels, T. M. D., Brown, I. J., Chan, Q., Stamler, J., Huang, C. C., et al. (2010). Metabolic profiling and the metabolome-wide association study: significance level for biomarker identification. Journal of Proteome Research, 9, 4620-4627. doi: 10. 1021/pr1003449.
-
(2010)
Journal of Proteome Research
, vol.9
, pp. 4620-4627
-
-
Chadeau-Hyam, M.1
Ebbels, T.M.D.2
Brown, I.J.3
Chan, Q.4
Stamler, J.5
Huang, C.C.6
-
4
-
-
20044366919
-
Statistical total correlation spectroscopy: an exploratory approach for latent biomarker identification from metabolic 1H NMR data sets
-
doi:10.1021/ac048630x
-
Cloarec, O., Dumas, M. E., Craig, A., Barton, R. H., Trygg, J., Hudson, J., et al. (2005a). Statistical total correlation spectroscopy: an exploratory approach for latent biomarker identification from metabolic 1H NMR data sets. Analytical Chemistry, 77, 1282-1289. doi: 10. 1021/ac048630x.
-
(2005)
Analytical Chemistry
, vol.77
, pp. 1282-1289
-
-
Cloarec, O.1
Dumas, M.E.2
Craig, A.3
Barton, R.H.4
Trygg, J.5
Hudson, J.6
-
5
-
-
12244293657
-
Evaluation of the orthogonal projection on latent structure model limitations caused by chemical shift variability and improved visualization of biomarker changes in 1H NMR spectroscopic metabonomic studies
-
doi:10.1021/ac048803i
-
Cloarec, O., Dumas, M. E., Trygg, J., Craig, A., Barton, R. H., Lindon, J. C., et al. (2005b). Evaluation of the orthogonal projection on latent structure model limitations caused by chemical shift variability and improved visualization of biomarker changes in 1H NMR spectroscopic metabonomic studies. Analytical Chemistry, 77, 517-526. doi: 10. 1021/ac048803i.
-
(2005)
Analytical Chemistry
, vol.77
, pp. 517-526
-
-
Cloarec, O.1
Dumas, M.E.2
Trygg, J.3
Craig, A.4
Barton, R.H.5
Lindon, J.C.6
-
6
-
-
64649084089
-
Analytic properties of statistical total correlation spectroscopy based information recovery in (1)H NMR metabolic data sets
-
doi:10.1021/ac801982h
-
Couto Alves, A., Rantalainen, M., Holmes, E., Nicholson, J. K., & Ebbels, T. M. (2009). Analytic properties of statistical total correlation spectroscopy based information recovery in (1)H NMR metabolic data sets. Analytical Chemistry,. doi: 10. 1021/ac801982h.
-
(2009)
Analytical Chemistry
-
-
Couto Alves, A.1
Rantalainen, M.2
Holmes, E.3
Nicholson, J.K.4
Ebbels, T.M.5
-
7
-
-
33645663178
-
Scaling and normalization effects in NMR spectroscopic metabonomic data sets
-
Craig, A., Cloarec, O., Holmes, E., Nicholson, J. K., & Lindon, J. C. (2006). Scaling and normalization effects in NMR spectroscopic metabonomic data sets. Analytical Chemistry, 78, 2262-2267.
-
(2006)
Analytical Chemistry
, vol.78
, pp. 2262-2267
-
-
Craig, A.1
Cloarec, O.2
Holmes, E.3
Nicholson, J.K.4
Lindon, J.C.5
-
8
-
-
33745728718
-
Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in H-1 NMR metabonomics
-
Dieterle, F., Ross, A., Schlotterbeck, G., & Senn, H. (2006). Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in H-1 NMR metabonomics. Analytical Chemistry, 78, 4281-4290.
-
(2006)
Analytical Chemistry
, vol.78
, pp. 4281-4290
-
-
Dieterle, F.1
Ross, A.2
Schlotterbeck, G.3
Senn, H.4
-
10
-
-
33645671556
-
Assessment of analytical reproducibility of 1H NMR spectroscopy based metabonomics for large-scale epidemiological research: the INTERMAP study
-
doi:10.1021/ac0517085
-
Dumas, M.-E., Maibaum, E. C., Teague, C., Ueshima, H., Zhou, B., Lindon, J. C., et al. (2006). Assessment of analytical reproducibility of 1H NMR spectroscopy based metabonomics for large-scale epidemiological research: the INTERMAP study. Analytical Chemistry, 78, 2199-2208. doi: 10. 1021/ac0517085.
-
(2006)
Analytical Chemistry
, vol.78
, pp. 2199-2208
-
-
Dumas, M.-E.1
Maibaum, E.C.2
Teague, C.3
Ueshima, H.4
Zhou, B.5
Lindon, J.C.6
-
11
-
-
0033757963
-
Metabolite profiling for plant functional genomics
-
Fiehn, O., Kopka, J., Dormann, P., Altmann, T., Trethewey, R. N., & Willmitzer, L. (2000). Metabolite profiling for plant functional genomics. Nat Biotech, 18, 1157-1161.
-
(2000)
Nat Biotech
, vol.18
, pp. 1157-1161
-
-
Fiehn, O.1
Kopka, J.2
Dormann, P.3
Altmann, T.4
Trethewey, R.N.5
Willmitzer, L.6
-
13
-
-
16344365619
-
Classification using partial least squares with penalized logistic regression
-
doi:10.1093/bioinformatics/bti114
-
Fort, G., & Lambert-Lacroix, S. (2005). Classification using partial least squares with penalized logistic regression. Bioinformatics, 21, 1104-1111. doi: 10. 1093/bioinformatics/bti114.
-
(2005)
Bioinformatics
, vol.21
, pp. 1104-1111
-
-
Fort, G.1
Lambert-Lacroix, S.2
-
14
-
-
43749087841
-
Human metabolic phenotype diversity and its association with diet and blood pressure
-
Holmes, E., Loo, R. L., Stamler, J., Bictash, M., Yap, I. K. S., Chan, Q., et al. (2008). Human metabolic phenotype diversity and its association with diet and blood pressure. Nature, 453, 396-400.
-
(2008)
Nature
, vol.453
, pp. 396-400
-
-
Holmes, E.1
Loo, R.L.2
Stamler, J.3
Bictash, M.4
Yap, I.K.S.5
Chan, Q.6
-
15
-
-
18744396052
-
Analytical reproducibility in 1H NMR-based metabonomic urinalysis
-
doi:10.1021/tx0255774
-
Keun, H. C., Ebbels, T. M. D., Antti, H., Bollard, M. E., Beckonert, O., Schlotterbeck, G., et al. (2002). Analytical reproducibility in 1H NMR-based metabonomic urinalysis. Chemical Research in Toxicology, 15, 1380-1386. doi: 10. 1021/tx0255774.
-
(2002)
Chemical Research in Toxicology
, vol.15
, pp. 1380-1386
-
-
Keun, H.C.1
Ebbels, T.M.D.2
Antti, H.3
Bollard, M.E.4
Beckonert, O.5
Schlotterbeck, G.6
-
18
-
-
0242718698
-
Iteratively reweighted partial least squares estimation for generalized linear regression
-
Marx, B. D. (1996). Iteratively reweighted partial least squares estimation for generalized linear regression. Technometrics, 38, 374-381.
-
(1996)
Technometrics
, vol.38
, pp. 374-381
-
-
Marx, B.D.1
-
19
-
-
77957292333
-
MetAssimulo: simulation of realistic NMR metabolic profiles
-
Muncey, H., Jones, R., De Iorio, M., & Ebbels, T. (2010). MetAssimulo: simulation of realistic NMR metabolic profiles. BMC Bioinformatics, 11, 496.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 496
-
-
Muncey, H.1
Jones, R.2
de Iorio, M.3
Ebbels, T.4
-
20
-
-
0036740519
-
Multi-class cancer classification via partial least squares with gene expression profiles
-
doi:10.1093/bioinformatics/18.9.1216
-
Nguyen, D. V., & Rocke, D. M. (2002). Multi-class cancer classification via partial least squares with gene expression profiles. Bioinformatics, 18, 1216-1226. doi: 10. 1093/bioinformatics/18. 9. 1216.
-
(2002)
Bioinformatics
, vol.18
, pp. 1216-1226
-
-
Nguyen, D.V.1
Rocke, D.M.2
-
21
-
-
36049042571
-
Variation of metabolites in normal human urine
-
Saude, E. J., Adamko, D., Rowe, B. H., Marrie, T., & Sykes, B. D. (2007). Variation of metabolites in normal human urine. Metabolomics, 3, 439-451.
-
(2007)
Metabolomics
, vol.3
, pp. 439-451
-
-
Saude, E.J.1
Adamko, D.2
Rowe, B.H.3
Marrie, T.4
Sykes, B.D.5
-
22
-
-
0036083139
-
Orthogonal projections to latent structures (O-PLS)
-
Trygg, J., & Wold, S. (2002). Orthogonal projections to latent structures (O-PLS). Journal of Chemometrics, 16, 119-128.
-
(2002)
Journal of Chemometrics
, vol.16
, pp. 119-128
-
-
Trygg, J.1
Wold, S.2
-
23
-
-
38949180527
-
Assessment of PLSDA cross validation
-
doi:10.1007/s11306-007-0099-6
-
Westerhuis, J., Hoefsloot, H., Smit, S., Vis, D., Smilde, A., van Velzen, E., et al. (2008). Assessment of PLSDA cross validation. Metabolomics, 4, 81-89. doi: 10. 1007/s11306-007-0099-6.
-
(2008)
Metabolomics
, vol.4
, pp. 81-89
-
-
Westerhuis, J.1
Hoefsloot, H.2
Smit, S.3
Vis, D.4
Smilde, A.5
van Velzen, E.6
-
24
-
-
33846088138
-
HMDB: the human metabolome database
-
Wishart, D. S., Tzur, D., Knox, C., Eisner, R., Guo, A. C., Young, N., et al. (2007). HMDB: the human metabolome database. Nucleic Acids Research, 35, D521-D526.
-
(2007)
Nucleic Acids Research
, vol.35
-
-
Wishart, D.S.1
Tzur, D.2
Knox, C.3
Eisner, R.4
Guo, A.C.5
Young, N.6
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