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Volumn 62, Issue 11, 2012, Pages 2717-2723

Phytohabitans flavus sp. nov., Phytohabitans rumicis sp. nov. and Phytohabitans houttuyneae sp. nov., isolated from plant roots, and emended description of the genus Phytohabitans

Author keywords

[No Author keywords available]

Indexed keywords

DNA; RNA 16S;

EID: 84868321077     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.037747-0     Document Type: Article
Times cited : (11)

References (27)
  • 1
    • 0000240038 scopus 로고
    • Chemical composition of cell-wall preparation from strains of various formgenera of aerobic actinomycetes
    • Becker, B., Lechevalier, M. P. & Lechevalier, H. A. (1965). Chemical composition of cell-wall preparation from strains of various formgenera of aerobic actinomycetes. Appl Microbiol 13, 236-243.
    • (1965) Appl Microbiol , vol.13 , pp. 236-243
    • Becker, B.1    Lechevalier, M.P.2    Lechevalier, H.A.3
  • 2
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J.-H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.-H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 3
    • 0017682064 scopus 로고
    • Distribution of menaquinones in actinomycetes and corynebacteria
    • Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
    • (1977) J Gen Microbiol , vol.100 , pp. 221-230
    • Collins, M.D.1    Pirouz, T.2    Goodfellow, M.3    Minnikin, D.E.4
  • 4
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 5
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 6
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 7
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a species tree topology
    • Fitch, W. M. (1972). Toward defining the course of evolution: minimum change for a species tree topology. Syst Zool 20, 406-416.
    • (1972) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 74549125386 scopus 로고    scopus 로고
    • SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
    • Gouy, M., Guindon, S. & Gascuel, O. (2010). SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27, 221-224.
    • (2010) Mol Biol Evol , vol.27 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 10
    • 78649310941 scopus 로고    scopus 로고
    • Phytohabitans suffuscus gen nov., sp. nov., an actinomycete of the family Micromonosporaceae isolated from plant roots
    • Inahashi, Y., Matsumoto, A., Danbara, H., Ōmura, S. & Takahashi, Y. (2010). Phytohabitans suffuscus gen. nov., sp. nov., an actinomycete of the family Micromonosporaceae isolated from plant roots. Int J Syst Evol Microbiol 60, 2652-2658.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 2652-2658
    • Inahashi, Y.1    Matsumoto, A.2    Danbara, H.3    Omura, S.4    Takahashi, Y.5
  • 11
    • 79955563465 scopus 로고    scopus 로고
    • Streptosporangium oxazolinicum sp nov., a novel endophytic actinomycete producing new antitrypanosomal antibiotics, spoxazomicins
    • Inahashi, Y., Matsumoto, A., Ōmura, S. & Takahashi, Y. (2011a). Streptosporangium oxazolinicum sp. nov., a novel endophytic actinomycete producing new antitrypanosomal antibiotics, spoxazomicins. J Antibiot (Tokyo) 64, 297-302.
    • (2011) J Antibiot (Tokyo) , vol.64 , pp. 297-302
    • Inahashi, Y.1    Matsumoto, A.2    Omura, S.3    Takahashi, Y.4
  • 12
    • 79955569186 scopus 로고    scopus 로고
    • Spoxazomicins A-C, novel antitrypanosomal alkaloids produced by an endophytic actinomycete, Streptosporangium oxazolinicum K07-0460T
    • other authors
    • Inahashi, Y., Iwatsuki, M., Ishiyama, A., Namatame, M., Nishihara-Tsukashima, A., Matsumoto, A., Hirose, T., Sunazuka, T., Yamada, H. & other authors (2011b). Spoxazomicins A-C, novel antitrypanosomal alkaloids produced by an endophytic actinomycete, Streptosporangium oxazolinicum K07-0460T. J Antibiot 64, 303-307.
    • (2011) J Antibiot , vol.64 , pp. 303-307
    • Inahashi, Y.1    Iwatsuki, M.2    Ishiyama, A.3    Namatame, M.4    Nishihara-Tsukashima, A.5    Matsumoto, A.6    Hirose, T.7    Sunazuka, T.8    Yamada, H.9
  • 13
    • 77954290013 scopus 로고    scopus 로고
    • Biosynthetic potential of phylogenetically unique endophytic actinomycetes from tropical plants
    • Janso, J. E. & Carter, G. T. (2010). Biosynthetic potential of phylogenetically unique endophytic actinomycetes from tropical plants. Appl Environ Microbiol 76, 4377-4386.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 4377-4386
    • Janso, J.E.1    Carter, G.T.2
  • 14
    • 0019481137 scopus 로고
    • Cell wall composition of Micromonospora olivoasterospora, Micromonospora sagamiensis, and related organisms
    • Kawamoto, I., Oka, T. & Nara, T. (1981). Cell wall composition of Micromonospora olivoasterospora, Micromonospora sagamiensis, and related organisms. J Bacteriol 146, 527-534.
    • (1981) J Bacteriol , vol.146 , pp. 527-534
    • Kawamoto, I.1    Oka, T.2    Nara, T.3
  • 15
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 19
    • 84957363038 scopus 로고
    • The utilization of carbon compounds by some Actinomycetales as an aid for species determination
    • Pridham, T. G. & Gottlieb, D. (1948). The utilization of carbon compounds by some Actinomycetales as an aid for species determination. J Bacteriol 56, 107-114.
    • (1948) J Bacteriol , vol.56 , pp. 107-114
    • Pridham, T.G.1    Gottlieb, D.2
  • 20
    • 50549178319 scopus 로고
    • Preparation of transforming deoxyribonucleic acid by phenol treatment
    • Saito, H. & Miura, K. I. (1963). Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72, 619-629.
    • (1963) Biochim Biophys Acta , vol.72 , pp. 619-629
    • Saito, H.1    Miura, K.I.2
  • 21
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 22
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 23
    • 0020638681 scopus 로고
    • Analysis of bacterial menaquinone mixtures by high performance liquid chromatography
    • Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J Appl Bacteriol 54, 31-36.
    • (1983) J Appl Bacteriol , vol.54 , pp. 31-36
    • Tamaoka, J.1    Katayama-Fujimura, Y.2    Kuraishi, H.3
  • 25
    • 0020367861 scopus 로고
    • Mycolic acid composition and thermally adaptative changes in Nocardia asteroides
    • Tomiyasu, I. (1982). Mycolic acid composition and thermally adaptative changes in Nocardia asteroides. J Bacteriol 151, 828-837.
    • (1982) J Bacteriol , vol.151 , pp. 828-837
    • Tomiyasu, I.1
  • 26
    • 0017590905 scopus 로고
    • Acyl type of bacterial cell wall: Its simple identification by a colourimetric method
    • Uchida, K. & Aida, K. (1977). Acyl type of bacterial cell wall: its simple identification by a colourimetric method. J Gen Appl Microbiol 23, 249-260.
    • (1977) J Gen Appl Microbiol , vol.23 , pp. 249-260
    • Uchida, K.1    Aida, K.2
  • 27
    • 0000770675 scopus 로고
    • International Committee on Systematic Bacteriology Report of the Ad Hoc Committee on reconciliation of approaches to bacterial systematics
    • other authors
    • Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the Ad Hoc Committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3    Grimont, P.A.D.4    Kandler, O.5    Krichevsky, M.I.6    Moore, L.H.7    Moore, W.E.C.8    Murray, R.G.E.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.