Incorporating latitudinal and central-marginal trends in assessing genetic variation across species ranges

Molecular Ecology

Volumn 21, Issue 22, 2012, Pages 5396-5403

  Guo, Qinfeng ^a  

^a USDA FOREST SERVICE   (United States)

Author keywords

, and diversity; climate change; genetic diversity; history; novelty; phylogeography; range geometry and orientation; species invasion

Indexed keywords

BIOLOGICAL MODEL; GENETIC VARIABILITY; GEOGRAPHY; METHODOLOGY; POPULATION GENETICS; REVIEW; SPECIES DIFFERENCE;

GENETIC VARIATION; GENETICS, POPULATION; GEOGRAPHY; MODELS, BIOLOGICAL; SPECIES SPECIFICITY;

EID: 84868205897     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.12012     Document Type: Review

References (52)

1. Bahn V, O'Connor RJ, Krohn WB, (2006) Effect of dispersal at range edges on the structure of species ranges. Oikos, 115, 89-96.
2. Baird NA, Etter PD, Atwood TS, Currey MC, Shiver AL, et al,. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE, 3, e3376.
3. Bridle JR, Vines TH, (2007) Limits to evolution at range margins: when and why does adaptation fail? Trends in Ecology & Evolution, 22, 140-147.
4. Brown JH, (1995) Macroecology. University of Chicago Press, Chicago.
5. Brown JH, Stevens GC, Kaufman DM, (1996) The geographic range: size, shape, boundaries, and internal structure. Annual Review of Ecology & Systematics, 27, 597-623.
6. Colwell RK, Rahbek C, Gotelli NJ, (2004) The mid-domain effect and species richness patterns: what have we learned so far? The American Naturalist, 163, E1-E23.
7. Eckert CG, Samis KE, Lougheed SC, (2008) Genetic variation across species' geographical ranges: The central-marginal hypothesis and beyond. Molecular Ecology, 17, 1170-1188.
8. Eckstein RL, O'neill RA, Danihelka J, Otte A, Köhler W, (2006) Genetic structure among and within peripheral and central populations of three endangered floodplain violets. Molecular Ecology, 15, 2367-2379.
9. Eo SH, Wares JP, Carroll JP, (2008) Population divergence in plant species reflects latitudinal biodiversity gradients. Biology Letters, 4, 382-384.
10. Faugeron S, Martinez EA, Correa JA, Cardenas L, Destombe C, Valero M, (2004) Reduced genetic diversity and increased population differentiation in peripheral and overharvested populations of Gigartina skottsbergii (Rhodophyta, Gigartinales) in southern Chile. Journal of Phycology, 40, 454-462.
11. Fleishman E, Ray C, Sjögren-Gulve P, Boggs CL, Murphy DD, (2002) Assessing the relative roles of patch quality, area, and isolation in predicting metapopulation dynamics. Conservation Biology, 16, 706-716.
12. Fortuna MA, Albaladejo RG, Fernández L, et al,. (2009) Networks of spatial genetic variation across species. Proceedings of the National Academy of Sciences of the United States of America, 106, 19044-19049.
13. Gabriel WJ, (1978) Genetic Variation in Seed and Fruit Characters in Sugar Maple. Research Paper NE-404. U.S. Department of Agriculture, Forest Service, Northeastern Forest Experiment Station, Broomall, PA.
14. Garner TW, Pearman B, Angelone S, (2004) Genetic diversity across a vertebrate species' range: a test of the central-peripheral hypothesis. Molecular Ecology, 13, 1047-1053.
15. Gaston KJ, (2003) The Structure and Dynamics of Geographic Ranges. Oxford University Press, Oxford.
16. Gilad Y, Prichard JK, Thornton K, (2009) Characterizing natural variation using next-generation sequencing technologies. Trends in Genetics, 25, 463-471.
17. Guo Q, Taper M, Schoenberger M, Brandle J, (2005) Spatial-temporal population dynamics across species range: from center to margin. Oikos, 108, 47-57.
18. Hampe A, Petit RT, (2005) Conserving biodiversity under climate change: The rear edge matters. Ecology Letters, 8, 461-467.
19. Hamrick JL, Godt MJW, Sherman-Broyles SL, (1992) Factors influencing levels of genetic diversity in woody plant species. New Forests, 6, 95-124.
20. Hardie DC, Hutchings JA, (2010) Evolutionary ecology at the extremes of species' ranges. Environmental Reviews, 18, 1-20.
21. Hellmann JJ, Pelini SL, Prior KM, Dzurisin JD, (2008) The response of two butterfly species to climatic variation at the edge of their range and the implications for poleward range shifts. Oecologia, 157, 583-592.
22. Howes BJ, Lougheed SC, (2008) Genetic diversity across the range of a temperate lizard. Journal of Biogeography, 35, 1269-1278.
23. Hutchison DW, (2003) Testing the central/peripheral model: analyses of microsatellite variability in the eastern collaredlizard Crotaphytus collaris collaris. American Midland Naturalist, 149, 148-162.
24. Ikeda H, Senni K, Fujii N, Setoguchi H, (2007) Post-glacial range fragmentation is responsible for the current distribution of Potentilla matsumurae Th. Wolf Rosaceae in the Japanese archipelago. Journal of Biogeography, 35, 791-800.
25. James AC, Azevedo RB, Partridge L, (1997) Genetic and environmental responses to temperature of Drosophila melanogaster from a latitudinal cline. Genetics, 146, 881-890.
26. Kanda LL, Fuller TK, Sievert PR, Kellogg RL, (2009) Seasonal source-sink dynamics at the edge of a species' range. Ecology, 90, 1574-1585.
27. Lammi A, Siikamäki P, Mustajärvi K, (1999) Genetic diversity, population size, and fitness in central and peripheral populations of a rare plant Lychnis viscaria. Conservation Biology, 13, 1069-1078.
28. Le Roux JJ, Wieczorek AM, Meyer JY, (2008) Genetic diversity and structure of the invasive tree Miconia calvescens in Pacific islands. Diversity & Distributions, 14, 935-948.
29. Lihová J, Kudoh H, Marhold K, (2010) Genetic structure and phylogeography of a temperate-boreal herb, Cardamine scutata Brassicaceae, in northeast Asia inferred from AFLPs and cpDNA haplotypes. American Journal of Botany, 97, 1058-1070.
30. Lomolino MV, Channel R, (1995) Splendid isolation: patterns of geographic range collapse in endangered mammals. Journal of Mammology, 762, 335-347.
31. Maguirre TL, Saenger P, Baverstock P, Henry R, (2000) Microsatellite analysis of genetic structure in the mangrove species Avicennia marina Forsk. Vierh. Avicenniaceae. Molecular Ecology, 9, 1853-1862.
32. Martin PR, McKay JK, (2004) Latitudinal variation in genetic divergence of populations and the potential for future speciation. Evolution, 58, 938-945.
33. Mcdonald-Madden E, Baxter PWJ, Possingham HP, (2008) Subpopulation triage: how to allocate conservation effort among populations. Conservation Biology, 22, 656-665.
34. Merrill KR, Meyer SE, Coleman CE, (2012) Population genetic analysis of Bromus tectorum (Poaceae) indicates recent range expansion may be facilitated by specialist genotypes. American Journal of Botany, 99, 529-537.
35. Miller MJ, Bermingham E, Klicka J, Escalante P, Kevin Winker K, (2010) Neotropical birds show a humped distribution of within-population genetic diversity along a latitudinal transect. Ecology Letters, 13, 576-586.
36. Mittelbach GG, Schemske DW, Cornell HV, et al,. (2007) Evolution and the latitudinal diversity gradient: speciation, extinction and biogeography. Ecology Letters, 10, 315-331.
37. Nybom H, (2004) Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Molecular Ecology, 13, 1143-1155.
38. Palma-Silva C, Lexer C, Paggi GM, et al,. (2009) Range-wide patterns of nuclear and chloroplast DNA diversity in Vriesea gigantea (Bromeliaceae), a neotropical forest species. Heredity, 103, 503-512.
39. Pattison RR, Mack RN, (2009) Environmental constraints on the invasion of Triadica sebifera in the eastern United States: an experimental field assessment. Oecologia, 158, 591-602.
40. Petit RJ, Aguinagalde I, De Beaulieu J-L, Bittkau C, et al,. (2003) Glacial refugia: hotspots but not melting pots of genetic diversity. Science, 300, 1563-1565.
41. Petit RJ, Duminil J, Fineschi S, et al,. (2005) Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Molecular Ecology, 14, 689-701.
42. Pfeifer M, Schatz B, Xavier Picõ F, et al,. (2009) Phylogeography and genetic structure of the orchid Himantoglossum hircinum (L.) Spreng. across its European central-marginal gradient. Journal of Biogeography, 36, 2353-2365.
43. Pinheiro F, de Barros F, Palma-Silva C, et al,. (2011) Phylogeography and genetic differentiation along the distributional range of the orchid Epidendrum fulgens: a Neotropical coastal species not restricted to glacial refugia. Journal of Biogeography, 38, 1923-1935.
44. Ren H, Zhang Q, Wang Z, et al,. (2010) Community ecology knowledge for conservation through possible re-introduction, a case study of a rare plant Primulina tabacum Hance in China. Plant Species Biology, 25, 43-50.
45. Schiemann K, Tyler T, Widen B, (2000) Allozyme diversity in relation to geographic distribution and population size in Lathyrus vernus (L.) Bernh. (Fabaceae). Plant Systematics & Evolution, 225, 119-132.
46. Schrey AW, Grispo M, Awad M, et al,. (2011) Broad-scale latitudinal patterns of genetic diversity among native European and introduced house sparrow (Passer domesticus) populations. Molecular Ecology, 20, 1133-1143.
47. Vandewoestijne S, Van Dyck H, (2010) Population genetic differences along a latitudinal cline between original and recently colonized habitat in a butterfly. PLoS ONE, 5, e13810.
48. Vecutich JA, Waite TA, (2003) Spatial patterns of demography and genetic processes across the species' range: null hypotheses for landscape conservation genetics. Conservation Genetics, 45, 639-645.
49. Vellend M, Geber MA, (2005) Connections between species diversity and genetic diversity. Ecology Letters, 8, 767-781.
50. Vik U, Jørgensen MH, Kauserud H, Nordal I, Brysting AK, (2010) Microsatellite markers show decreasing diversity but unchanged level of clonality in Dryas octopetala Rosaceae with increasing latitude. American Journal of Botany, 97, 988-997.
51. Wakeley J, (2004) Metapopulation genetics. In: Metapopulation Biology (eds, Hanski I, Gaggiotti OE,), pp. 175-198. Academic Press, New York.
52. Zakharov EV, Hellmann JJ, (2008) Genetic differentiation across a latitudinal gradient in two co-occurring butterfly species: revealing population differences in a context of climate change. Molecular Ecology, 17, 189-208.