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Volumn 72, Issue 3, 2012, Pages 368-377

The Arabidopsis DCP2 gene is required for proper mRNA turnover and prevents transgene silencing in Arabidopsis

Author keywords

aberrant mRNA; Arabidopsis; decapping; ITS1; small RNAs; transgene silencing

Indexed keywords

ABERRANT MRNA; ARABIDOPSIS; DECAPPING; ITS1; SMALL RNA; TRANSGENE SILENCING;

EID: 84868194698     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2012.05066.x     Document Type: Article
Times cited : (48)

References (43)
  • 1
    • 4644242349 scopus 로고    scopus 로고
    • RNA silencing in plants
    • Baulcombe, D., (2004) RNA silencing in plants. Nature, 431, 356-363.
    • (2004) Nature , vol.431 , pp. 356-363
    • Baulcombe, D.1
  • 2
    • 79951527876 scopus 로고    scopus 로고
    • A quantitative assay for measuring mRNA decapping by splinted ligation reverse transcription polymerase chain reaction: QSL-RT-PCR
    • Blewett, N., Coller, J., and, Goldstrohm, A., (2011) A quantitative assay for measuring mRNA decapping by splinted ligation reverse transcription polymerase chain reaction: qSL-RT-PCR. RNA, 17, 535-543.
    • (2011) RNA , vol.17 , pp. 535-543
    • Blewett, N.1    Coller, J.2    Goldstrohm, A.3
  • 5
    • 80053567859 scopus 로고    scopus 로고
    • Intron splicing suppresses RNA silencing in Arabidopsis
    • Christie, M., Croft, L.J., and, Carroll, B.J., (2011a) Intron splicing suppresses RNA silencing in Arabidopsis. Plant J. 68, 159-167.
    • (2011) Plant J. , vol.68 , pp. 159-167
    • Christie, M.1    Croft, L.J.2    Carroll, B.J.3
  • 6
  • 7
    • 0142245636 scopus 로고    scopus 로고
    • A Gateway™ cloning vector set for high-throughput functional analysis of genes in planta
    • Curtis, M.D., and, Grossniklaus, U., (2003) A Gateway™ cloning vector set for high-throughput functional analysis of genes in planta. Plant Physiol. 133, 462-469.
    • (2003) Plant Physiol. , vol.133 , pp. 462-469
    • Curtis, M.D.1    Grossniklaus, U.2
  • 8
    • 71949092231 scopus 로고    scopus 로고
    • A hairpin RNA construct residing in an intron efficiently triggered RNA-directed DNA methylation in tobacco
    • Dalakouras, A., Moser, M., Zwiebel, M., Krczal, G., Hell, R., and, Wassenegger, M., (2009) A hairpin RNA construct residing in an intron efficiently triggered RNA-directed DNA methylation in tobacco. Plant J. 60, 840-851.
    • (2009) Plant J. , vol.60 , pp. 840-851
    • Dalakouras, A.1    Moser, M.2    Zwiebel, M.3    Krczal, G.4    Hell, R.5    Wassenegger, M.6
  • 9
    • 0034716924 scopus 로고    scopus 로고
    • An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus
    • Dalmay, T., Hamilton, A., Rudd, S., Angell, S., and, Baulcombe, D.C., (2000) An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell, 101, 543-553.
    • (2000) Cell , vol.101 , pp. 543-553
    • Dalmay, T.1    Hamilton, A.2    Rudd, S.3    Angell, S.4    Baulcombe, D.C.5
  • 10
    • 8344240473 scopus 로고    scopus 로고
    • A link between mRNA turnover and RNA interference in Arabidopsis
    • Gazzani, S., Lawrenson, T., Woodward, C., Headon, D., and, Sablowski, R., (2004) A link between mRNA turnover and RNA interference in Arabidopsis. Science, 306, 1046-1048.
    • (2004) Science , vol.306 , pp. 1046-1048
    • Gazzani, S.1    Lawrenson, T.2    Woodward, C.3    Headon, D.4    Sablowski, R.5
  • 11
    • 34347398218 scopus 로고    scopus 로고
    • Components of the Arabidopsis mRNA decapping complex are required for early seedling development
    • Goeres, D.C., Van Norman, J.M., Zhang, W., Fauver, N.A., Spencer, M.L., and, Sieburth, L.E., (2007) Components of the Arabidopsis mRNA decapping complex are required for early seedling development. Plant Cell, 19, 1549-1564.
    • (2007) Plant Cell , vol.19 , pp. 1549-1564
    • Goeres, D.C.1    Van Norman, J.M.2    Zhang, W.3    Fauver, N.A.4    Spencer, M.L.5    Sieburth, L.E.6
  • 13
    • 38349131643 scopus 로고    scopus 로고
    • Identification of functional domains in Arabidopsis thaliana mRNA decapping enzyme (AtDcp2)
    • Gunawardana, D., Cheng, H.C., and, Gayler, K.R., (2008) Identification of functional domains in Arabidopsis thaliana mRNA decapping enzyme (AtDcp2). Nucleic Acids Res. 36, 203-216.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 203-216
    • Gunawardana, D.1    Cheng, H.C.2    Gayler, K.R.3
  • 15
    • 0033615491 scopus 로고    scopus 로고
    • A species of small antisense RNA in posttranscriptional gene silencing in plants
    • Hamilton, A.J., and, Baulcombe, D.C., (1999) A species of small antisense RNA in posttranscriptional gene silencing in plants. Science, 286, 950-952.
    • (1999) Science , vol.286 , pp. 950-952
    • Hamilton, A.J.1    Baulcombe, D.C.2
  • 16
    • 33750062572 scopus 로고    scopus 로고
    • Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis
    • Herr, A.J., Molnar, A., Jones, A., and, Baulcombe, D.C., (2006) Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis. Proc. Natl Acad. Sci. USA, 103, 14994-15001.
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 14994-15001
    • Herr, A.J.1    Molnar, A.2    Jones, A.3    Baulcombe, D.C.4
  • 17
    • 0042738082 scopus 로고    scopus 로고
    • Transitivity-dependent and -independent cell-to-cell movement of RNA silencing
    • Himber, C., Dunoyer, P., Moissiard, G., Ritzenthaler, C., and, Voinnet, O., (2003) Transitivity-dependent and -independent cell-to-cell movement of RNA silencing. EMBO J. 22, 4523-4533.
    • (2003) EMBO J. , vol.22 , pp. 4523-4533
    • Himber, C.1    Dunoyer, P.2    Moissiard, G.3    Ritzenthaler, C.4    Voinnet, O.5
  • 18
    • 0035543896 scopus 로고    scopus 로고
    • Evidence for expression level-dependent modulation of carbohydrate status and viral resistance by the potato leafroll virus movement protein in transgenic tobacco plants
    • Hofius, D., Herbers, K., Melzer, M., Omid, A., Tacke, E., Wolf, S., and, Sonnewald, U., (2001) Evidence for expression level-dependent modulation of carbohydrate status and viral resistance by the potato leafroll virus movement protein in transgenic tobacco plants. Plant J. 28, 529-543.
    • (2001) Plant J. , vol.28 , pp. 529-543
    • Hofius, D.1    Herbers, K.2    Melzer, M.3    Omid, A.4    Tacke, E.5    Wolf, S.6    Sonnewald, U.7
  • 19
    • 34248546224 scopus 로고    scopus 로고
    • Characterization of Arabidopsis decapping proteins AtDCP1 and AtDCP2, which are essential for post-embryonic development
    • Iwasaki, S., Takeda, A., Motose, H., and, Watanabe, Y., (2007) Characterization of Arabidopsis decapping proteins AtDCP1 and AtDCP2, which are essential for post-embryonic development. FEBS Lett. 581, 2455-2459.
    • (2007) FEBS Lett. , vol.581 , pp. 2455-2459
    • Iwasaki, S.1    Takeda, A.2    Motose, H.3    Watanabe, Y.4
  • 21
    • 36248959315 scopus 로고    scopus 로고
    • The silver lining of a viral agent: Increasing seed yield and harvest index in Arabidopsis by ectopic expression of the potato leaf roll virus movement protein
    • Kronberg, K., Vogel, F., Rutten, T., Hajirezaei, M.R., Sonnewald, U., and, Hofius, D., (2007) The silver lining of a viral agent: increasing seed yield and harvest index in Arabidopsis by ectopic expression of the potato leaf roll virus movement protein. Plant Physiol. 145, 905-918.
    • (2007) Plant Physiol. , vol.145 , pp. 905-918
    • Kronberg, K.1    Vogel, F.2    Rutten, T.3    Hajirezaei, M.R.4    Sonnewald, U.5    Hofius, D.6
  • 22
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U.K., (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 23
    • 0023654956 scopus 로고
    • Improved method for the isolation of RNA from plant tissues
    • Logemann, J., Schell, J., and, Willmitzer, L., (1987) Improved method for the isolation of RNA from plant tissues. Anal. Biochem. 163, 16-20.
    • (1987) Anal. Biochem. , vol.163 , pp. 16-20
    • Logemann, J.1    Schell, J.2    Willmitzer, L.3
  • 24
    • 34250683941 scopus 로고    scopus 로고
    • Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis
    • Luo, Z., and, Chen, Z., (2007) Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis. Plant Cell, 19, 943-958.
    • (2007) Plant Cell , vol.19 , pp. 943-958
    • Luo, Z.1    Chen, Z.2
  • 26
    • 0034716907 scopus 로고    scopus 로고
    • Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance
    • Mourrain, P., Beclin, C., Elmayan, T., et al. (2000) Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance. Cell, 101, 533-542.
    • (2000) Cell , vol.101 , pp. 533-542
    • Mourrain, P.1    Beclin, C.2    Elmayan, T.3
  • 27
    • 33845742490 scopus 로고    scopus 로고
    • The exoribonuclease XRN4 is a component of the ethylene response pathway in Arabidopsis
    • Potuschak, T., Vansiri, A., Binder, B.M., Lechner, E., Vierstra, R.D., and, Genschik, P., (2006) The exoribonuclease XRN4 is a component of the ethylene response pathway in Arabidopsis. Plant Cell, 18, 3047-3057.
    • (2006) Plant Cell , vol.18 , pp. 3047-3057
    • Potuschak, T.1    Vansiri, A.2    Binder, B.M.3    Lechner, E.4    Vierstra, R.D.5    Genschik, P.6
  • 28
    • 0031421379 scopus 로고    scopus 로고
    • The frequency and degree of cosuppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence
    • Que, Q., Wang, H.Y., English, J.J., and, Jorgensen, R.A., (1997) The frequency and degree of cosuppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence. Plant Cell, 9, 1357-1368.
    • (1997) Plant Cell , vol.9 , pp. 1357-1368
    • Que, Q.1    Wang, H.Y.2    English, J.J.3    Jorgensen, R.A.4
  • 29
    • 79951527525 scopus 로고    scopus 로고
    • Evidence that XRN4, an Arabidopsis homolog of exoribonuclease XRN1, preferentially impacts transcripts with certain sequences or in particular functional categories
    • Rymarquis, L.A., Souret, F.F., and, Green, P.J., (2011) Evidence that XRN4, an Arabidopsis homolog of exoribonuclease XRN1, preferentially impacts transcripts with certain sequences or in particular functional categories. RNA, 17, 501-511.
    • (2011) RNA , vol.17 , pp. 501-511
    • Rymarquis, L.A.1    Souret, F.F.2    Green, P.J.3
  • 30
    • 12744280061 scopus 로고    scopus 로고
    • Silencing in Arabidopsis T-DNA transformants: The predominant role of a gene-specific RNA sensing mechanism versus position effects
    • Schubert, D., Lechtenberg, B., Forsbach, A., Gils, M., Bahadur, S., and, Schmidt, R., (2004) Silencing in Arabidopsis T-DNA transformants: the predominant role of a gene-specific RNA sensing mechanism versus position effects. Plant Cell, 16, 2561-2572.
    • (2004) Plant Cell , vol.16 , pp. 2561-2572
    • Schubert, D.1    Lechtenberg, B.2    Forsbach, A.3    Gils, M.4    Bahadur, S.5    Schmidt, R.6
  • 31
    • 0001832157 scopus 로고
    • Red light-independent instability of oat phytochrome mRNA in vivo
    • Seeley, K.A., Byrne, D.H., and, Colbert, J.T., (1992) Red light-independent instability of oat phytochrome mRNA in vivo. Plant Cell, 4, 29-38.
    • (1992) Plant Cell , vol.4 , pp. 29-38
    • Seeley, K.A.1    Byrne, D.H.2    Colbert, J.T.3
  • 32
    • 30044439885 scopus 로고    scopus 로고
    • Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe
    • She, M., Decker, C.J., Chen, N., Tumati, S., Parker, R., and, Song, H., (2006) Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe. Nat. Struct. Mol. Biol. 13, 63-70.
    • (2006) Nat. Struct. Mol. Biol. , vol.13 , pp. 63-70
    • She, M.1    Decker, C.J.2    Chen, N.3    Tumati, S.4    Parker, R.5    Song, H.6
  • 34
    • 39549110203 scopus 로고    scopus 로고
    • MicroRNA detection by Northern blotting using locked nucleic acid probes
    • Varallyay, E., Burgyan, J., and, Havelda, Z., (2008) MicroRNA detection by Northern blotting using locked nucleic acid probes. Nat. Protoc. 3, 190-196.
    • (2008) Nat. Protoc. , vol.3 , pp. 190-196
    • Varallyay, E.1    Burgyan, J.2    Havelda, Z.3
  • 35
    • 46149088681 scopus 로고    scopus 로고
    • Plant ARGONAUTES
    • Vaucheret, H., (2008) Plant ARGONAUTES. Trends Plant Sci. 13, 350-358.
    • (2008) Trends Plant Sci. , vol.13 , pp. 350-358
    • Vaucheret, H.1
  • 36
    • 34547866723 scopus 로고    scopus 로고
    • Intracellular trafficking of Potato leafroll virus movement protein in transgenic Arabidopsis
    • Vogel, F., Hofius, D., and, Sonnewald, U., (2007) Intracellular trafficking of Potato leafroll virus movement protein in transgenic Arabidopsis. Traffic, 8, 1205-1214.
    • (2007) Traffic , vol.8 , pp. 1205-1214
    • Vogel, F.1    Hofius, D.2    Sonnewald, U.3
  • 37
    • 78650391178 scopus 로고    scopus 로고
    • The second face of a known player: Arabidopsis silencing suppressor AtXRN4 acts organ-specifically
    • Vogel, F., Hofius, D., Paulus, K.E., Jungkunz, I., and, Sonnewald, U., (2011) The second face of a known player: Arabidopsis silencing suppressor AtXRN4 acts organ-specifically. New Phytol. 189, 484-493.
    • (2011) New Phytol. , vol.189 , pp. 484-493
    • Vogel, F.1    Hofius, D.2    Paulus, K.E.3    Jungkunz, I.4    Sonnewald, U.5
  • 38
    • 0035425379 scopus 로고    scopus 로고
    • RNA silencing as a plant immune system against viruses
    • Voinnet, O., (2001) RNA silencing as a plant immune system against viruses. Trends Genet. 17, 449-459.
    • (2001) Trends Genet. , vol.17 , pp. 449-459
    • Voinnet, O.1
  • 39
    • 46149095029 scopus 로고    scopus 로고
    • Use, tolerance and avoidance of amplified RNA silencing by plants
    • Voinnet, O., (2008) Use, tolerance and avoidance of amplified RNA silencing by plants. Trends Plant Sci. 13, 317-328.
    • (2008) Trends Plant Sci. , vol.13 , pp. 317-328
    • Voinnet, O.1
  • 40
    • 0030798444 scopus 로고    scopus 로고
    • Systemic signalling in gene silencing
    • Voinnet, O., and, Baulcombe, D.C., (1997) Systemic signalling in gene silencing. Nature, 389, 553.
    • (1997) Nature , vol.389 , pp. 553
    • Voinnet, O.1    Baulcombe, D.C.2
  • 41
    • 72049130531 scopus 로고    scopus 로고
    • Arabidopsis decapping 5 is required for mRNA decapping, P-body formation, and translational repression during postembryonic development
    • Xu, J., and, Chua, N.H., (2009) Arabidopsis decapping 5 is required for mRNA decapping, P-body formation, and translational repression during postembryonic development. Plant Cell, 21, 3270-3279.
    • (2009) Plant Cell , vol.21 , pp. 3270-3279
    • Xu, J.1    Chua, N.H.2
  • 42
    • 33947540895 scopus 로고    scopus 로고
    • Arabidopsis DCP2, DCP1, and VARICOSE form a decapping complex required for postembryonic development
    • Xu, J., Yang, J.Y., Niu, Q.W., and, Chua, N.H., (2006) Arabidopsis DCP2, DCP1, and VARICOSE form a decapping complex required for postembryonic development. Plant Cell, 18, 3386-3398.
    • (2006) Plant Cell , vol.18 , pp. 3386-3398
    • Xu, J.1    Yang, J.Y.2    Niu, Q.W.3    Chua, N.H.4
  • 43
    • 0037474126 scopus 로고    scopus 로고
    • ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation
    • Zilberman, D., Cao, X., and, Jacobsen, S.E., (2003) ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation. Science, 299, 716-719.
    • (2003) Science , vol.299 , pp. 716-719
    • Zilberman, D.1    Cao, X.2    Jacobsen, S.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.