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Volumn 68, Issue 1, 2011, Pages 159-167

Intron splicing suppresses RNA silencing in Arabidopsis

Author keywords

ABA HYPERSENSITIVE 1; cap binding complex; gene silencing; intron splicing; RNA dependent RNA polymerase

Indexed keywords

ABA HYPERSENSITIVE 1; ARABIDOPSIS; ARABIDOPSIS THALIANA; CAP-BINDING; CAP-BINDING COMPLEXES; ENDOGENOUS GENES; EXON SEQUENCES; GENE SILENCING; IN-VIVO; REPORTER SYSTEMS; RNA SILENCING; RNA-DEPENDENT RNA POLYMERASE; SMALL RNA; TRANS-GENES; TRANSGENE; TRANSGENE SILENCING; TRANSGENIC CROPS; TRANSGENICS; TRANSPOSABLE ELEMENTS;

EID: 80053567859     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2011.04676.x     Document Type: Article
Times cited : (75)

References (51)
  • 2
    • 0037117416 scopus 로고    scopus 로고
    • A branched pathway for transgene-induced RNA silencing in plants
    • DOI 10.1016/S0960-9822(02)00792-3, PII S0960982202007923
    • Beclin, C., Boutet, S., Waterhouse, P., and, Vaucheret, H., (2002) A branched pathway for transgene-induced RNA silencing in plants. Curr. Biol. 12, 684-688. (Pubitemid 34315855)
    • (2002) Current Biology , vol.12 , Issue.8 , pp. 684-688
    • Beclin, C.1    Boutet, S.2    Waterhouse, P.3    Vaucheret, H.4
  • 3
    • 33646137364 scopus 로고    scopus 로고
    • The diversity of RNA silencing pathways in plants
    • Brodersen, P., and, Voinnet, O., (2006) The diversity of RNA silencing pathways in plants. Trends Genet. 22, 268-280.
    • (2006) Trends Genet. , vol.22 , pp. 268-280
    • Brodersen, P.1    Voinnet, O.2
  • 5
    • 0023503630 scopus 로고
    • Introns increase gene expression in cultured maize cells
    • Callis, J., Fromm, M., and, Walbot, V., (1987) Introns increase gene expression in cultured maize cells. Genes Dev. 1, 1183-1200.
    • (1987) Genes Dev. , vol.1 , pp. 1183-1200
    • Callis, J.1    Fromm, M.2    Walbot, V.3
  • 6
    • 0031171283 scopus 로고    scopus 로고
    • A combinatorial role for exon, intron and splice site sequences in splicing in maize
    • DOI 10.1046/j.1365-313X.1997.11061253.x
    • Carle-Urioste, J.C., Volker, B., and, Walbot, V., (1997) A combinatorial role for exon, intron and splice site sequences in splicing in maize. Plant J. 11, 1253-1263. (Pubitemid 27307242)
    • (1997) Plant Journal , vol.11 , Issue.6 , pp. 1253-1263
    • Carle-Urioste, J.C.1    Brendel, V.2    Walbot, V.3
  • 8
    • 44449164912 scopus 로고    scopus 로고
    • A Silencing Safeguard: Links between RNA Silencing and mRNA Processing in Arabidopsis
    • DOI 10.1016/j.devcel.2008.05.012, PII S1534580708002128
    • Chen, X., (2008) A silencing safeguard: links between RNA silencing and mRNA processing in Arabidopsis. Dev. Cell, 14, 811-812. (Pubitemid 351757208)
    • (2008) Developmental Cell , vol.14 , Issue.6 , pp. 811-812
    • Chen, X.1
  • 9
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J., and, Bent, A.F., (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735-743.
    • (1998) Plant J. , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 10
    • 0034716924 scopus 로고    scopus 로고
    • An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus
    • Dalmay, T., Hamilton, A., Rudd, S., Angell, S., and, Baulcombe, D.C., (2000) An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell, 101, 543-553.
    • (2000) Cell , vol.101 , pp. 543-553
    • Dalmay, T.1    Hamilton, A.2    Rudd, S.3    Angell, S.4    Baulcombe, D.C.5
  • 11
    • 0024605850 scopus 로고
    • Sequences downstream of translation start regulate quantitative expression of two petunia rbcS genes
    • Dean, C., Favreau, M., Bond-Nutter, D., Bedbrook, J., and, Dunsmuir, P., (1989) Sequences downstream of translation start regulate quantitative expression of two petunia rbcS genes. Plant Cell, 1, 201-208.
    • (1989) Plant Cell , vol.1 , pp. 201-208
    • Dean, C.1    Favreau, M.2    Bond-Nutter, D.3    Bedbrook, J.4    Dunsmuir, P.5
  • 12
    • 0030066256 scopus 로고    scopus 로고
    • Suppression of virus accumulation in transgenic plants exhibiting silencing of nuclear genes
    • English, J.J., Mueller, E., and, Baulcombe, D.C., (1996) Suppression of virus accumulation in transgenic plants exhibiting silencing of nuclear genes. Plant Cell, 8, 179-188.
    • (1996) Plant Cell , vol.8 , pp. 179-188
    • English, J.J.1    Mueller, E.2    Baulcombe, D.C.3
  • 13
    • 8344240473 scopus 로고    scopus 로고
    • A link between mRNA turnover and RNA interference in Arabidopsis
    • DOI 10.1126/science.1101092
    • Gazzani, S., Lawrenson, T., Woodward, C., Headon, D., and, Sablowski, R., (2004) A link between rnRNA turnover and RNA interference in Arabidopsis. Science, 306, 1046-1048. (Pubitemid 39482910)
    • (2004) Science , vol.306 , Issue.5698 , pp. 1046-1048
    • Gazzani, S.1    Lawrenson, T.2    Woodward, C.3    Headon, D.4    Sablowski, R.5
  • 17
    • 14844295120 scopus 로고    scopus 로고
    • RNA polymerase IV directs silencing of endogenous DNA
    • DOI 10.1126/science.1106910
    • Herr, A.J., Jensen, M.B., Dalmay, T., and, Baulcombe, D.C., (2005) RNA polymerase IV directs silencing of endogenous DNA. Science, 308, 118-120. (Pubitemid 40471011)
    • (2005) Science , vol.308 , Issue.5718 , pp. 118-120
    • Herr, A.J.1    Jensen, M.B.2    Dalmay, T.3    Baulcombe, D.C.4
  • 19
    • 0042738082 scopus 로고    scopus 로고
    • Transitivity-dependent and -independent cell-to-cell movement of RNA silencing
    • DOI 10.1093/emboj/cdg431
    • Himber, C., Dunoyer, P., Moissiard, G., Ritzenthaler, C., and, Voinnet, O., (2003) Transitivity-dependent and -independent cell-to-cell movement of RNA silencing. EMBO J. 22, 4523-4533. (Pubitemid 37087205)
    • (2003) EMBO Journal , vol.22 , Issue.17 , pp. 4523-4533
    • Himber, C.1    Dunoyer, P.2    Moissiard, G.3    Ritzenthaler, C.4    Voinnet, O.5
  • 21
    • 0027969151 scopus 로고
    • A nuclear cap binding protein complex involved in pre-mRNA splicing
    • DOI 10.1016/0092-8674(94)90530-4
    • Izaurralde, E., Lewis, J., McGuigan, C., Jankowska, M., Darzynkiewicz, E., and, Mattaj, I.W., (1994) A nuclear cap-binding protein complex involved in pre-mRNA splicing. Cell, 78, 657-668. (Pubitemid 24268588)
    • (1994) Cell , vol.78 , Issue.4 , pp. 657-668
    • Izaurralde, E.1    Lewis, J.2    McGuigan, C.3    Jankowska, M.4    Darzynkiewicz, E.5    Mattaj, L.W.6
  • 22
    • 0033398983 scopus 로고    scopus 로고
    • RNA-DNA interactions and DNA methylation in post-transcriptional gene silencing
    • DOI 10.1105/tpc.11.12.2291
    • Jones, L., Hamilton, A.J., Voinnet, O., Thomas, C.L., Maule, A.J., and, Baulcombe, D.C., (1999) RNA-DNA interactions and DNA methylation in post-transcriptional gene silencing. Plant Cell, 11, 2291-2301. (Pubitemid 30031376)
    • (1999) Plant Cell , vol.11 , Issue.12 , pp. 2291-2301
    • Jones, L.1    Hamilton, A.J.2    Voinnet, O.3    Thomas, C.L.4    Maule, A.J.5    Baulcombe, D.C.6
  • 24
    • 26944490683 scopus 로고    scopus 로고
    • Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum
    • DOI 10.1007/s11103-005-0668-x
    • Koscianska, E., Kalantidis, K., Wypijewski, K., Sadowski, J., and, Tabler, M., (2005) Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum. Plant Mol. Biol. 59, 647-661. (Pubitemid 41484197)
    • (2005) Plant Molecular Biology , vol.59 , Issue.4 , pp. 647-661
    • Koscianska, E.1    Kalantidis, K.2    Wypijewski, K.3    Sadowski, J.4    Tabler, M.5
  • 25
    • 34250190291 scopus 로고    scopus 로고
    • mRNA metabolism of flowering-time regulators in wild-type Arabidopsis revealed by a nuclear cap binding protein mutant, abh1
    • DOI 10.1111/j.1365-313X.2007.03110.x
    • Kuhn, J.M., Breton, G., and, Schroeder, J.I., (2007) mRNA metabolism of flowering-time regulators in wild-type Arabidopsis revealed by a nuclear cap binding protein mutant, abh1. Plant J. 50, 1049-1062. (Pubitemid 46904113)
    • (2007) Plant Journal , vol.50 , Issue.6 , pp. 1049-1062
    • Kuhn, J.M.1    Breton, G.2    Schroeder, J.I.3
  • 27
    • 41949135532 scopus 로고    scopus 로고
    • EJCs at the Heart of Translational Control
    • DOI 10.1016/j.cell.2008.04.002, PII S0092867408004509
    • Le Hir, H., and, Séraphin, B., (2008) EJCs at the heart of translational control. Cell, 133, 213-216. (Pubitemid 351508309)
    • (2008) Cell , vol.133 , Issue.2 , pp. 213-216
    • Le Hir, H.1    Seraphin, B.2
  • 28
    • 0027145973 scopus 로고
    • Induction of a highly specific antiviral state in transgenic plants: Implications for regulation of gene expression and virus resistance
    • DOI 10.1105/tpc.5.12.1749
    • Lindbo, J.A., Silvarosales, L., Proebsting, W.M., and, Dougherty, W.G., (1993) Induction of a highly specific antiviral state in transgenic plants-implications for regulation of gene expression and virus resistance. Plant Cell, 5, 1749-1759. (Pubitemid 2034681)
    • (1993) Plant Cell , vol.5 , Issue.12 , pp. 1749-1759
    • Lindbo, J.A.1    Silva-Rosales, L.2    Proebsting, W.M.3    Dougherty, W.G.4
  • 29
    • 0025576260 scopus 로고
    • Insertion of Mu1 elements in the first intron of the Adh1-S gene of maize results in novel RNA processing events
    • Luehrsen, K.R., and, Walbot, V., (1990) Insertion of MU1 elements in the first intron of the ADH1-S gene of maize results in novel RNA processing events. Plant Cell, 2, 1225-1238. (Pubitemid 120015471)
    • (1990) Plant Cell , vol.2 , Issue.12 , pp. 1225-1238
    • Luehrsen, K.R.1    Walbot, V.2
  • 30
    • 34250683941 scopus 로고    scopus 로고
    • Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis
    • DOI 10.1105/tpc.106.045724
    • Luo, Z., and, Chen, Z., (2007) Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis. Plant Cell, 19, 943-958. (Pubitemid 46953239)
    • (2007) Plant Cell , vol.19 , Issue.3 , pp. 943-958
    • Luo, Z.1    Chen, Z.2
  • 31
    • 24944498904 scopus 로고    scopus 로고
    • Systemic Agrobacterium tumefaciens-mediated transfection of viral replicons for efficient transient expression in plants
    • DOI 10.1038/nbt1094
    • Marillonnet, S., Thoeringer, C., Kandzia, R., Klimyuk, V., and, Gleba, Y., (2005) Systemic Agrobacterium tumefaciens-mediated transfection of viral replicons for efficient transient expression in plants. Nat. Biotech. 23, 718-723. (Pubitemid 41716362)
    • (2005) Nature Biotechnology , vol.23 , Issue.6 , pp. 718-723
    • Marillonnet, S.1    Thoeringer, C.2    Kandzia, R.3    Klimyuk, V.4    Gleba, Y.5
  • 32
    • 34447498668 scopus 로고    scopus 로고
    • Transitivity in Arabidopsis can be primed, requires the redundant action of the antiviral Dicer-like 4 and Dicer-like 2, and is compromised by viral-encoded suppressor proteins
    • DOI 10.1261/rna.541307
    • Moissiard, G., Parizotto, E.A., Himber, C., and, Voinnet, O., (2007) Transitivity in Arabidopsis can be primed, requires the redundant action of the antiviral Dicer-like 4 and Dicer-like 2, and is compromised by viral-encoded suppressor proteins. RNA, 13, 1268-1278. (Pubitemid 47080472)
    • (2007) RNA , vol.13 , Issue.8 , pp. 1268-1278
    • Moissiard, G.1    Parizotto, E.A.2    Himber, C.3    Voinnet, O.4
  • 33
    • 0034716907 scopus 로고    scopus 로고
    • Arabidopsis SGS2 nd SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance
    • Mourrain, P., Beclin, C., Elmayan, T., et al. (2000) Arabidopsis SGS2 nd SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance. Cell, 101, 533-542.
    • (2000) Cell , vol.101 , pp. 533-542
    • Mourrain, P.1    Beclin, C.2    Elmayan, T.3
  • 34
    • 37849034683 scopus 로고    scopus 로고
    • Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana
    • Narsai, R., Howell, K.A., Millar, A.H., O'Toole, N., Small, I., and, Whelan, J., (2007) Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana. Plant Cell, 19, 3418-3436.
    • (2007) Plant Cell , vol.19 , pp. 3418-3436
    • Narsai, R.1    Howell, K.A.2    Millar, A.H.3    O'Toole, N.4    Small, I.5    Whelan, J.6
  • 35
    • 0030875953 scopus 로고    scopus 로고
    • Systemic acquired silencing: Transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions
    • DOI 10.1093/emboj/16.15.4738
    • Palauqui, J.C., Elmayan, T., Pollien, J.M., and, Vaucheret, H., (1997) Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J. 16, 4738-4745. (Pubitemid 27326611)
    • (1997) EMBO Journal , vol.16 , Issue.15 , pp. 4738-4745
    • Palauqui, J.-C.1    Elmayan, T.2    Pollien, J.-M.3    Vaucheret, H.4
  • 36
    • 0031421379 scopus 로고    scopus 로고
    • The frequency and degree of cosuppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence
    • DOI 10.1105/tpc.9.8.1357
    • Que, Q.D., Wang, H.Y., English, J.J., and, Jorgensen, R.A., (1997) The frequency and degree of cosuppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence. Plant Cell, 9, 1357-1368. (Pubitemid 28174114)
    • (1997) Plant Cell , vol.9 , Issue.8 , pp. 1357-1368
    • Que, Q.1    Wang, H.-Y.2    English, J.J.3    Jorgensen, R.A.4
  • 37
    • 0023960330 scopus 로고
    • Cap recognition and the entry of mRNA into the protein synthesis initiation cycle
    • Rhoads, R.E., (1988) Cap recognition and the entry of mRNA into the protein synthesis initiation cycle. Trends Biochem. Sci. 13, 52-56.
    • (1988) Trends Biochem. Sci. , vol.13 , pp. 52-56
    • Rhoads, R.E.1
  • 38
    • 48249115236 scopus 로고    scopus 로고
    • Promoter-proximal introns in Arabidopsis thaliana are enriched in dispersed signals that elevate gene expression
    • DOI 10.1105/tpc.107.057190
    • Rose, A.B., Elfersi, T., Parra, G., and, Korf, I., (2008) Promoter-proximal introns in Arabidopsis thaliana are enriched in dispersed signals that elevate gene expression. Plant Cell, 20, 543-551. (Pubitemid 352843991)
    • (2008) Plant Cell , vol.20 , Issue.3 , pp. 543-551
    • Rose, A.B.1    Elfersi, T.2    Parra, G.3    Korf, I.4
  • 39
    • 3643145804 scopus 로고    scopus 로고
    • Initiation and maintenance of virus-induced gene silencing
    • DOI 10.1105/tpc.10.6.937
    • Ruiz, M.T., Voinnet, O., and, Baulcombe, D.C., (1998) Initiation and maintenance of virus-induced gene silencing. Plant Cell, 10, 937-946. (Pubitemid 28537418)
    • (1998) Plant Cell , vol.10 , Issue.6 , pp. 937-946
    • Teresa Ruiz, M.1    Voinnet, O.2    Baulcombe, D.C.3
  • 40
    • 12744280061 scopus 로고    scopus 로고
    • Silencing in Arabidopsis T-DNA transformants: The predominant role of a gene-specific RNA sensing mechanism versus position effects
    • DOI 10.1105/tpc.104.024547
    • Schubert, D., Lechtenberg, B., Forsbach, A., Gils, M., Bahadur, S., and, Schmidt, R., (2004) Silencing in Arabidopsis T-DNA transformants: the predominant role of a gene-specific RNA sensing mechanism versus position effects. Plant Cell, 16, 2561-2572. (Pubitemid 41071346)
    • (2004) Plant Cell , vol.16 , Issue.10 , pp. 2561-2572
    • Schubert, D.1    Lechtenberg, B.2    Forsbach, A.3    Gils, M.4    Bahadur, S.5    Schmidt, R.6
  • 41
    • 0021921587 scopus 로고
    • mRNA cap binding proteins: Essential factors for initiating translation
    • Shatkin, A.J., (1985) mRNA cap binding proteins: essential factors for initiating translation. Cell, 40, 223-224. (Pubitemid 15138450)
    • (1985) Cell , vol.40 , Issue.2 , pp. 223-224
    • Shatkin, A.J.1
  • 43
    • 0024237848 scopus 로고
    • Cap-binding proteins of eukaryotic mRNA functions in initiation and control of translation
    • Sonenberg, N., (1988) Cap-binding proteins of eukaryotic mRNA functions in initiation and control of translation. Prog. Nucleic Acid Res. Mol. Biol. 35, 173-207.
    • (1988) Prog. Nucleic Acid Res. Mol. Biol. , vol.35 , pp. 173-207
    • Sonenberg, N.1
  • 44
    • 0031796374 scopus 로고    scopus 로고
    • Position-dependent methylation and transcriptional silencing of transgenes in inverted T-DNA repeats: Implications for posttranscriptional silencing of homologous host genes in plants
    • Stam, M., Viterbo, A., Mol, J.N.M., and, Kooter, J.M., (1998) Position-dependent methylation and transcriptional silencing of transgenes in inverted T-DNA repeats: implications for posttranscriptional silencing of homologous host genes in plants. Mol. Cell. Biol. 18, 6165-6177. (Pubitemid 28500508)
    • (1998) Molecular and Cellular Biology , vol.18 , Issue.11 , pp. 6165-6177
    • Stam, M.1    Viterbo, A.2    Mol, J.N.M.3    Kooter, J.M.4
  • 45
    • 0035077189 scopus 로고    scopus 로고
    • Size constraints for targeting post-transcriptional gene silencing and for RNA-directed methylation in Nicotiana benthamiana using a potato virus X vector
    • DOI 10.1046/j.1365-313X.2001.00976.x
    • Thomas, C.L., Jones, L., Baulcombe, D.C., and, Maule, A.J., (2001) Size constraints for targeting post-transcriptional gene silencing and for RNA-directed methylation in Nicotiana benthamiana using a potato virus X vector. Plant J. 25, 417-425. (Pubitemid 32235075)
    • (2001) Plant Journal , vol.25 , Issue.4 , pp. 417-425
    • Thomas, C.L.1    Jones, L.2    Baulcombe, D.C.3    Maule, A.J.4
  • 46
    • 0035999373 scopus 로고    scopus 로고
    • Spreading of RNA targeting and DNA methylation in RNA silencing requires transcription of the target gene and a putative RNA-dependent RNA polymerase
    • DOI 10.1105/tpc.010480
    • Vaistij, F.E., Jones, L., and, Baulcombe, D.C., (2002) Spreading of RNA targeting and DNA methylation in RNA silencing requires transcription of the target gene and a putative RNA-dependent RNA polymerase. Plant Cell, 14, 857-867. (Pubitemid 34519607)
    • (2002) Plant Cell , vol.14 , Issue.4 , pp. 857-867
    • Vaistij, F.E.1    Jones, L.2    Baulcombe, D.C.3
  • 47
    • 0035054777 scopus 로고    scopus 로고
    • Transcriptional gene silencing in plants: Targets, inducers and regulators
    • DOI 10.1016/S0168-9525(00)02166-1, PII S0168952500021661
    • Vaucheret, H., and, Fagard, M., (2001) Transcriptional gene silencing in plants: targets, inducers and regulators. Trends Genet. 17, 29-35. (Pubitemid 32332977)
    • (2001) Trends in Genetics , vol.17 , Issue.1 , pp. 29-35
    • Vaucheret, H.1    Fagard, M.2
  • 48
    • 78149437462 scopus 로고    scopus 로고
    • Introns reduce transitivity proportionally to their length, suggesting that silencing spreads along the pre-mRNA
    • Vermeersch, L., De Winne, N., and, Depicker, A., (2010) Introns reduce transitivity proportionally to their length, suggesting that silencing spreads along the pre-mRNA. Plant J. 64, 392-401.
    • (2010) Plant J. , vol.64 , pp. 392-401
    • Vermeersch, L.1    De Winne, N.2    Depicker, A.3
  • 49
    • 46149095029 scopus 로고    scopus 로고
    • Use, tolerance and avoidance of amplified RNA silencing by plants
    • Voinnet, O., (2008) Use, tolerance and avoidance of amplified RNA silencing by plants. Trends Plant Sci. 13, 317-328.
    • (2008) Trends Plant Sci. , vol.13 , pp. 317-328
    • Voinnet, O.1
  • 50
    • 0033905703 scopus 로고    scopus 로고
    • High-efficiency silencing of a β-glucuronidase gene in rice is correlated with repetitive transgene structure but is independent of DNA methylation
    • DOI 10.1023/A:1006490331303
    • Wang, M.B., and, Waterhouse, P.M., (2000) High-efficiency silencing of a beta-glucuronidase gene in rice is correlated with repetitive transgene structure but is independent of DNA methylation. Plant Mol. Biol. 43, 67-82. (Pubitemid 30600111)
    • (2000) Plant Molecular Biology , vol.43 , Issue.1 , pp. 67-82
    • Wang, M.-B.1    Waterhouse, P.M.2


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