메뉴 건너뛰기




Volumn 48, Issue 2, 2012, Pages 231-241

Direct regulation of GTP homeostasis by (p)ppGpp: A critical component of viability and stress resistance

Author keywords

[No Author keywords available]

Indexed keywords

GUANOSINE TRIPHOSPHATE; GUANYLATE KINASE; HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; NUCLEOTIDE GUANOSINE (PENTA)TETRAPHOSPHATE; PHOSPHATE; UNCLASSIFIED DRUG;

EID: 84868147753     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2012.08.009     Document Type: Article
Times cited : (236)

References (43)
  • 2
    • 0035951305 scopus 로고    scopus 로고
    • Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro
    • Barker M.M., Gaal T., Josaitis C.A., Gourse R.L. Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro. J. Mol. Biol. 2001, 305:673-688.
    • (2001) J. Mol. Biol. , vol.305 , pp. 673-688
    • Barker, M.M.1    Gaal, T.2    Josaitis, C.A.3    Gourse, R.L.4
  • 3
    • 0021024568 scopus 로고
    • Specificity and control of uptake of purines and other compounds in Bacillus subtilis
    • Beaman T.C., Hitchins A.D., Ochi K., Vasantha N., Endo T., Freese E. Specificity and control of uptake of purines and other compounds in Bacillus subtilis. J. Bacteriol. 1983, 156:1107-1117.
    • (1983) J. Bacteriol. , vol.156 , pp. 1107-1117
    • Beaman, T.C.1    Hitchins, A.D.2    Ochi, K.3    Vasantha, N.4    Endo, T.5    Freese, E.6
  • 4
    • 80655143420 scopus 로고    scopus 로고
    • CodY-mediated regulation of guanosine uptake in Bacillus subtilis
    • Belitsky B.R., Sonenshein A.L. CodY-mediated regulation of guanosine uptake in Bacillus subtilis. J. Bacteriol. 2011, 193:6276-6287.
    • (2011) J. Bacteriol. , vol.193 , pp. 6276-6287
    • Belitsky, B.R.1    Sonenshein, A.L.2
  • 6
    • 40849098022 scopus 로고    scopus 로고
    • Lethal accumulation of guanylic nucleotides in Saccharomyces cerevisiae HPT1-deregulated mutants
    • Breton A., Pinson B., Coulpier F., Giraud M.F., Dautant A., Daignan-Fornier B. Lethal accumulation of guanylic nucleotides in Saccharomyces cerevisiae HPT1-deregulated mutants. Genetics 2008, 178:815-824.
    • (2008) Genetics , vol.178 , pp. 815-824
    • Breton, A.1    Pinson, B.2    Coulpier, F.3    Giraud, M.F.4    Dautant, A.5    Daignan-Fornier, B.6
  • 8
    • 0036849768 scopus 로고    scopus 로고
    • Structural and biochemical analysis of the Obg GTP binding protein
    • Buglino J., Shen V., Hakimian P., Lima C.D. Structural and biochemical analysis of the Obg GTP binding protein. Structure 2002, 10:1581-1592.
    • (2002) Structure , vol.10 , pp. 1581-1592
    • Buglino, J.1    Shen, V.2    Hakimian, P.3    Lima, C.D.4
  • 10
    • 38649092391 scopus 로고    scopus 로고
    • Transcription profiling of the stringent response in Escherichia coli
    • Durfee T., Hansen A.M., Zhi H., Blattner F.R., Jin D.J. Transcription profiling of the stringent response in Escherichia coli. J. Bacteriol. 2008, 190:1084-1096.
    • (2008) J. Bacteriol. , vol.190 , pp. 1084-1096
    • Durfee, T.1    Hansen, A.M.2    Zhi, H.3    Blattner, F.R.4    Jin, D.J.5
  • 11
    • 0024566701 scopus 로고
    • Bacillus subtilis pur operon expression and regulation
    • Ebbole D.J., Zalkin H. Bacillus subtilis pur operon expression and regulation. J. Bacteriol. 1989, 171:2136-2141.
    • (1989) J. Bacteriol. , vol.171 , pp. 2136-2141
    • Ebbole, D.J.1    Zalkin, H.2
  • 12
    • 0015240172 scopus 로고
    • The mechanism of amino acid control of guanylate and adenylate biosynthesis
    • Gallant J., Irr J., Cashel M. The mechanism of amino acid control of guanylate and adenylate biosynthesis. J. Biol. Chem. 1971, 246:5812-5816.
    • (1971) J. Biol. Chem. , vol.246 , pp. 5812-5816
    • Gallant, J.1    Irr, J.2    Cashel, M.3
  • 13
    • 0015502060 scopus 로고
    • The regulation of purine utilization in bacteria. V. Inhibition of purine phosphoribosyltransferase activities and purine uptake in isolated membrane vesicles by guanosine tetraphosphate
    • Hochstadt-Ozer J., Cashel M. The regulation of purine utilization in bacteria. V. Inhibition of purine phosphoribosyltransferase activities and purine uptake in isolated membrane vesicles by guanosine tetraphosphate. J. Biol. Chem. 1972, 247:7067-7072.
    • (1972) J. Biol. Chem. , vol.247 , pp. 7067-7072
    • Hochstadt-Ozer, J.1    Cashel, M.2
  • 14
    • 78951481983 scopus 로고    scopus 로고
    • Guanine nucleotide pool imbalance impairs multiple steps of protein synthesis and disrupts GCN4 translational control in Saccharomyces cerevisiae
    • Iglesias-Gato D., Martin-Marcos P., Santos M.A., Hinnebusch A.G., Tamame M. Guanine nucleotide pool imbalance impairs multiple steps of protein synthesis and disrupts GCN4 translational control in Saccharomyces cerevisiae. Genetics 2011, 187:105-122.
    • (2011) Genetics , vol.187 , pp. 105-122
    • Iglesias-Gato, D.1    Martin-Marcos, P.2    Santos, M.A.3    Hinnebusch, A.G.4    Tamame, M.5
  • 15
    • 0016823448 scopus 로고
    • IMP dehydrogenase, an enzyme linked with proliferation and malignancy
    • Jackson R.C., Weber G., Morris H.P. IMP dehydrogenase, an enzyme linked with proliferation and malignancy. Nature 1975, 256:331-333.
    • (1975) Nature , vol.256 , pp. 331-333
    • Jackson, R.C.1    Weber, G.2    Morris, H.P.3
  • 17
    • 33749646813 scopus 로고    scopus 로고
    • Physiological analysis of the stringent response elicited in an extreme thermophilic bacterium, Thermus thermophilus
    • Kasai K., Nishizawa T., Takahashi K., Hosaka T., Aoki H., Ochi K. Physiological analysis of the stringent response elicited in an extreme thermophilic bacterium, Thermus thermophilus. J. Bacteriol. 2006, 188:7111-7122.
    • (2006) J. Bacteriol. , vol.188 , pp. 7111-7122
    • Kasai, K.1    Nishizawa, T.2    Takahashi, K.3    Hosaka, T.4    Aoki, H.5    Ochi, K.6
  • 18
    • 0036501462 scopus 로고    scopus 로고
    • Identification of an IMPDH1 mutation in autosomal dominant retinitis pigmentosa (RP10) revealed following comparative microarray analysis of transcripts derived from retinas of wild-type and Rho(-/-) mice
    • Kennan A., Aherne A., Palfi A., Humphries M., McKee A., Stitt A., Simpson D.A., Demtroder K., Orntoft T., Ayuso C., et al. Identification of an IMPDH1 mutation in autosomal dominant retinitis pigmentosa (RP10) revealed following comparative microarray analysis of transcripts derived from retinas of wild-type and Rho(-/-) mice. Hum. Mol. Genet. 2002, 11:547-557.
    • (2002) Hum. Mol. Genet. , vol.11 , pp. 547-557
    • Kennan, A.1    Aherne, A.2    Palfi, A.3    Humphries, M.4    McKee, A.5    Stitt, A.6    Simpson, D.A.7    Demtroder, K.8    Orntoft, T.9    Ayuso, C.10
  • 19
    • 52249087130 scopus 로고    scopus 로고
    • Quantitative metabolome analysis using liquid chromatography-high-resolution mass spectrometry
    • Kiefer P., Portais J.C., Vorholt J.A. Quantitative metabolome analysis using liquid chromatography-high-resolution mass spectrometry. Anal. Biochem. 2008, 382:94-100.
    • (2008) Anal. Biochem. , vol.382 , pp. 94-100
    • Kiefer, P.1    Portais, J.C.2    Vorholt, J.A.3
  • 21
    • 10044225617 scopus 로고    scopus 로고
    • An alternative strategy for bacterial ribosome synthesis: Bacillus subtilis rRNA transcription regulation
    • Krasny L., Gourse R.L. An alternative strategy for bacterial ribosome synthesis: Bacillus subtilis rRNA transcription regulation. EMBO J. 2004, 23:4473-4483.
    • (2004) EMBO J. , vol.23 , pp. 4473-4483
    • Krasny, L.1    Gourse, R.L.2
  • 22
    • 0030771435 scopus 로고    scopus 로고
    • Guanosine tetra- and pentaphosphate promote accumulation of inorganic polyphosphate in Escherichia coli
    • Kuroda A., Murphy H., Cashel M., Kornberg A. Guanosine tetra- and pentaphosphate promote accumulation of inorganic polyphosphate in Escherichia coli. J. Biol. Chem. 1997, 272:21240-21243.
    • (1997) J. Biol. Chem. , vol.272 , pp. 21240-21243
    • Kuroda, A.1    Murphy, H.2    Cashel, M.3    Kornberg, A.4
  • 23
    • 0021099614 scopus 로고
    • Diadenosine 5',5''-P1,P4-tetraphosphate and related adenylylated nucleotides in Salmonella typhimurium
    • Lee P.C., Bochner B.R., Ames B.N. Diadenosine 5',5''-P1,P4-tetraphosphate and related adenylylated nucleotides in Salmonella typhimurium. J. Biol. Chem. 1983, 258:6827-6834.
    • (1983) J. Biol. Chem. , vol.258 , pp. 6827-6834
    • Lee, P.C.1    Bochner, B.R.2    Ames, B.N.3
  • 25
    • 0019456415 scopus 로고
    • Response of guanosine 5'-triphosphate concentration to nutritional changes and its significance for Bacillus subtilis sporulation
    • Lopez J.M., Dromerick A., Freese E. Response of guanosine 5'-triphosphate concentration to nutritional changes and its significance for Bacillus subtilis sporulation. J. Bacteriol. 1981, 146:605-613.
    • (1981) J. Bacteriol. , vol.146 , pp. 605-613
    • Lopez, J.M.1    Dromerick, A.2    Freese, E.3
  • 27
    • 0037336206 scopus 로고    scopus 로고
    • Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis
    • Molle V., Nakaura Y., Shivers R.P., Yamaguchi H., Losick R., Fujita Y., Sonenshein A.L. Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis. J. Bacteriol. 2003, 185:1911-1922.
    • (2003) J. Bacteriol. , vol.185 , pp. 1911-1922
    • Molle, V.1    Nakaura, Y.2    Shivers, R.P.3    Yamaguchi, H.4    Losick, R.5    Fujita, Y.6    Sonenshein, A.L.7
  • 28
    • 0347536251 scopus 로고    scopus 로고
    • Isolation of RNA polymerase suppressors of a (p)ppGpp deficiency
    • Murphy H., Cashel M. Isolation of RNA polymerase suppressors of a (p)ppGpp deficiency. Methods Enzymol. 2003, 371:596-601.
    • (2003) Methods Enzymol. , vol.371 , pp. 596-601
    • Murphy, H.1    Cashel, M.2
  • 30
    • 4043069926 scopus 로고    scopus 로고
    • DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP
    • Paul B.J., Barker M.M., Ross W., Schneider D.A., Webb C., Foster J.W., Gourse R.L. DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP. Cell 2004, 118:311-322.
    • (2004) Cell , vol.118 , pp. 311-322
    • Paul, B.J.1    Barker, M.M.2    Ross, W.3    Schneider, D.A.4    Webb, C.5    Foster, J.W.6    Gourse, R.L.7
  • 32
    • 78449268845 scopus 로고    scopus 로고
    • Interdependence of cell growth and gene expression: origins and consequences
    • Scott M., Gunderson C.W., Mateescu E.M., Zhang Z., Hwa T. Interdependence of cell growth and gene expression: origins and consequences. Science 2010, 330:1099-1102.
    • (2010) Science , vol.330 , pp. 1099-1102
    • Scott, M.1    Gunderson, C.W.2    Mateescu, E.M.3    Zhang, Z.4    Hwa, T.5
  • 33
    • 0001615271 scopus 로고
    • Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate
    • Spizizen J. Transformation of biochemically deficient strains of Bacillus subtilis by deoxyribonucleate. Proc. Natl. Acad. Sci. USA 1958, 44:1072-1078.
    • (1958) Proc. Natl. Acad. Sci. USA , vol.44 , pp. 1072-1078
    • Spizizen, J.1
  • 34
    • 50849126804 scopus 로고    scopus 로고
    • High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies
    • Srivatsan A., Han Y., Peng J., Tehranchi A.K., Gibbs R., Wang J.D., Chen R. High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies. PLoS Genet. 2008, 4:e1000139. 10.1371/journal.pgen.1000139.
    • (2008) PLoS Genet. , vol.4
    • Srivatsan, A.1    Han, Y.2    Peng, J.3    Tehranchi, A.K.4    Gibbs, R.5    Wang, J.D.6    Chen, R.7
  • 38
    • 0019168132 scopus 로고
    • Enzyme changes during Bacillus subtilis sporulation caused by deprivation of guanine nucleotides
    • Vasantha N., Freese E. Enzyme changes during Bacillus subtilis sporulation caused by deprivation of guanine nucleotides. J. Bacteriol. 1980, 144:1119-1125.
    • (1980) J. Bacteriol. , vol.144 , pp. 1119-1125
    • Vasantha, N.1    Freese, E.2
  • 39
    • 40049090539 scopus 로고    scopus 로고
    • Still looking for the magic spot: the crystallographically defined binding site for ppGpp on RNA polymerase is unlikely to be responsible for rRNA transcription regulation
    • Vrentas C.E., Gaal T., Berkmen M.B., Rutherford S.T., Haugen S.P., Vassylyev D.G., Ross W., Gourse R.L. Still looking for the magic spot: the crystallographically defined binding site for ppGpp on RNA polymerase is unlikely to be responsible for rRNA transcription regulation. J. Mol. Biol. 2008, 377:551-564.
    • (2008) J. Mol. Biol. , vol.377 , pp. 551-564
    • Vrentas, C.E.1    Gaal, T.2    Berkmen, M.B.3    Rutherford, S.T.4    Haugen, S.P.5    Vassylyev, D.G.6    Ross, W.7    Gourse, R.L.8
  • 40
    • 33847383586 scopus 로고    scopus 로고
    • Nutritional control of elongation of DNA replication by (p)ppGpp
    • Wang J.D., Sanders G.M., Grossman A.D. Nutritional control of elongation of DNA replication by (p)ppGpp. Cell 2007, 128:865-875.
    • (2007) Cell , vol.128 , pp. 865-875
    • Wang, J.D.1    Sanders, G.M.2    Grossman, A.D.3
  • 41
    • 0030866704 scopus 로고    scopus 로고
    • Cloning and characterization of a relA/spoT homologue from Bacillus subtilis
    • Wendrich T.M., Marahiel M.A. Cloning and characterization of a relA/spoT homologue from Bacillus subtilis. Mol. Microbiol. 1997, 26:65-79.
    • (1997) Mol. Microbiol. , vol.26 , pp. 65-79
    • Wendrich, T.M.1    Marahiel, M.A.2
  • 42
    • 80052017616 scopus 로고    scopus 로고
    • Metabolomic data processing, analysis, and interpretation using MetaboAnalyst
    • Chapter 14, Unit 14.10
    • Xia J., Wishart D.S. Metabolomic data processing, analysis, and interpretation using MetaboAnalyst. Curr. Protoc. Bioinformatics 2011, Chapter 14, Unit 14.10.
    • (2011) Curr. Protoc. Bioinformatics
    • Xia, J.1    Wishart, D.S.2
  • 43
    • 0025992789 scopus 로고
    • Residual guanosine 3',5'-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations
    • Xiao H., Kalman M., Ikehara K., Zemel S., Glaser G., Cashel M. Residual guanosine 3',5'-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations. J. Biol. Chem. 1991, 266:5980-5990.
    • (1991) J. Biol. Chem. , vol.266 , pp. 5980-5990
    • Xiao, H.1    Kalman, M.2    Ikehara, K.3    Zemel, S.4    Glaser, G.5    Cashel, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.