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Volumn 111, Issue 5, 2012, Pages 2157-2163

Application of HRM assays with EvaGreen dye for genotyping Giardia duodenalis zoonotic assemblages

Author keywords

[No Author keywords available]

Indexed keywords

DYE; EVAGREEN; GENOMIC DNA; UNCLASSIFIED DRUG;

EID: 84868132330     PISSN: 09320113     EISSN: 14321955     Source Type: Journal    
DOI: 10.1007/s00436-012-3064-x     Document Type: Article
Times cited : (30)

References (28)
  • 2
    • 77749303992 scopus 로고    scopus 로고
    • Genotyping of Giardia duodenalis cysts by new real-time PCR assays for detection of mixed infections in human samples
    • 20080999 10.1128/AEM.02305-09 1:CAS:528:DC%2BC3cXjvVGjsb0%3D
    • Almeida A, Pozio E, Cacciò SM (2010) Genotyping of Giardia duodenalis cysts by new real-time PCR assays for detection of mixed infections in human samples. Appl Environ Microbiol 76(6):1895-1901
    • (2010) Appl Environ Microbiol , vol.76 , Issue.6 , pp. 1895-1901
    • Almeida, A.1    Pozio, E.2    Cacciò, S.M.3
  • 3
    • 79959373307 scopus 로고    scopus 로고
    • Genotypes of Giardia intestinalis clinical isolates of gastrointestinal symptomatic and asymptomatic Saudi children
    • 20838811 10.1007/s00436-010-2033-5
    • Al-Mohammed HI (2011) Genotypes of Giardia intestinalis clinical isolates of gastrointestinal symptomatic and asymptomatic Saudi children. Parasitol Res 108:1375-1381
    • (2011) Parasitol Res , vol.108 , pp. 1375-1381
    • Al-Mohammed, H.I.1
  • 4
    • 0036164482 scopus 로고    scopus 로고
    • Sensitive PCR-restriction fragment length polymorphism assay for detection and genotyping of Giardia duodenalis in human feces
    • 11825955 10.1128/JCM.40.2.446-452.2002 1:CAS:528:DC%2BD38XhvFGktbY%3D
    • Amar CF, Dear PH, Pedraza-Diaz S, Looker N, Linnane E, McLauchlin J (2002) Sensitive PCR-restriction fragment length polymorphism assay for detection and genotyping of Giardia duodenalis in human feces. J Clin Microbiol 40:446-452
    • (2002) J Clin Microbiol , vol.40 , pp. 446-452
    • Amar, C.F.1    Dear, P.H.2    Pedraza-Diaz, S.3    Looker, N.4    Linnane, E.5    McLauchlin, J.6
  • 5
    • 0041527207 scopus 로고    scopus 로고
    • Detection and genotyping by real-time PCR/RFLP analyses of Giardia duodenalis from human faeces
    • 12867562 10.1099/jmm.0.05193-0 1:CAS:528:DC%2BD3sXntlKht70%3D
    • Amar CF, Dear PH, McLauchlin J (2003) Detection and genotyping by real-time PCR/RFLP analyses of Giardia duodenalis from human faeces. J Med Microbiol 52:681-683
    • (2003) J Med Microbiol , vol.52 , pp. 681-683
    • Amar, C.F.1    Dear, P.H.2    McLauchlin, J.3
  • 6
    • 3042522967 scopus 로고    scopus 로고
    • Genotype characterisation of Giardia duodenalis isolates from domestic and farm animals by SSU-rRNA gene sequencing
    • 15219360 10.1016/j.vetpar.2004.04.008 1:CAS:528:DC%2BD2cXlt1Wit7Y%3D
    • Berrilli F, Di Cave D, De Liberato C, Franco A, Scaramozzino P, Orecchia P (2004) Genotype characterisation of Giardia duodenalis isolates from domestic and farm animals by SSU-rRNA gene sequencing. Vet Parasitol 122:193-199
    • (2004) Vet Parasitol , vol.122 , pp. 193-199
    • Berrilli, F.1    Di Cave, D.2    De Liberato, C.3    Franco, A.4    Scaramozzino, P.5    Orecchia, P.6
  • 7
    • 80053908585 scopus 로고    scopus 로고
    • Giardia duodenalis assemblages and Entamoeba species infecting non-human primates in an Italian zoological garden: Zoonotic potential and management traits
    • 21988762 10.1186/1756-3305-4-199
    • Berrilli F, Prisco C, Friedrich KG, Di Cerbo P, Di Cavel D, De Liberato C (2011) Giardia duodenalis assemblages and Entamoeba species infecting non-human primates in an Italian zoological garden: zoonotic potential and management traits. Parasites Vectors 4:199
    • (2011) Parasites Vectors , vol.4 , pp. 199
    • Berrilli, F.1    Prisco, C.2    Friedrich, K.G.3    Di Cerbo, P.4    Di Cavel, D.5    De Liberato, C.6
  • 8
    • 50049135646 scopus 로고    scopus 로고
    • Molecular epidemiology of giardiasis
    • 18501440 10.1016/j.molbiopara.2008.04.006
    • Cacciò SM, Ryan U (2008) Molecular epidemiology of giardiasis. Mol Biochem Parasitol 160:75-80
    • (2008) Mol Biochem Parasitol , vol.160 , pp. 75-80
    • Cacciò, S.M.1    Ryan, U.2
  • 10
    • 50249156826 scopus 로고    scopus 로고
    • Frequency of Giardia intestinalis assemblages isolated from dogs and humans in a community from Culiacan, Sinaloa, Mexico using beta-giardin restriction gene
    • 18617331 10.1016/j.vetpar.2008.04.029 1:CAS:528:DC%2BD1cXhtVKms7jF
    • Eligio-Garcia L, Cortes-Campos A, Cota-Guajardo S, Gaxiola S, Jimenez-Cardoso E (2008a) Frequency of Giardia intestinalis assemblages isolated from dogs and humans in a community from Culiacan, Sinaloa, Mexico using beta-giardin restriction gene. Vet Parasitol 156:205-209
    • (2008) Vet Parasitol , vol.156 , pp. 205-209
    • Eligio-Garcia, L.1    Cortes-Campos, A.2    Cota-Guajardo, S.3    Gaxiola, S.4    Jimenez-Cardoso, E.5
  • 11
    • 48349108781 scopus 로고    scopus 로고
    • Classification of Giardia intestinalis isolates by multiple polymerase chain reaction (multiplex)
    • 18551318 10.1007/s00436-008-1042-0
    • Eligio-Garcia L, Cortes-Campos A, Jimenez-Cardoso E (2008b) Classification of Giardia intestinalis isolates by multiple polymerase chain reaction (multiplex). Parasitol Res 103:797-800
    • (2008) Parasitol Res , vol.103 , pp. 797-800
    • Eligio-Garcia, L.1    Cortes-Campos, A.2    Jimenez-Cardoso, E.3
  • 12
    • 46949105560 scopus 로고    scopus 로고
    • High resolution melting applications for clinical laboratory medicine
    • 18502416 10.1016/j.yexmp.2008.03.012 1:CAS:528:DC%2BD1cXosVOrtro%3D
    • Erali M, Voelkerding KV, Witter CT (2008) High resolution melting applications for clinical laboratory medicine. Exp Mol Pathol 85:50-58
    • (2008) Exp Mol Pathol , vol.85 , pp. 50-58
    • Erali, M.1    Voelkerding, K.V.2    Witter, C.T.3
  • 13
    • 78751544529 scopus 로고    scopus 로고
    • Zoonotic potential and molecular epidemiology of Giardia species and giardiasis
    • 21233509 10.1128/CMR.00033-10 1:CAS:528:DC%2BC3MXjtFSgu7g%3D
    • Feng Y, Xiao L (2011) Zoonotic potential and molecular epidemiology of Giardia species and giardiasis. Clin Microbiol Rev 24(1):110-140
    • (2011) Clin Microbiol Rev , vol.24 , Issue.1 , pp. 110-140
    • Feng, Y.1    Xiao, L.2
  • 14
    • 3142764580 scopus 로고    scopus 로고
    • Real-Time PCR assay for detection and genotype differentiation of Giardia lamblia in stool specimens
    • 15243104 10.1128/JCM.42.7.3317-3320.2004 1:CAS:528:DC%2BD2cXntFGkur0%3D
    • Guy RA, Xiao C, Horgen PA (2004) Real-Time PCR assay for detection and genotype differentiation of Giardia lamblia in stool specimens. J Clin Microbiol 42(7):3317-3320
    • (2004) J Clin Microbiol , vol.42 , Issue.7 , pp. 3317-3320
    • Guy, R.A.1    Xiao, C.2    Horgen, P.A.3
  • 15
    • 34249725525 scopus 로고    scopus 로고
    • Multiplex real-time PCR assay for detection of Entamoeba histolytica, Giardia intestinalis, and Cryptosporidium spp
    • 17426176 1:CAS:528:DC%2BD2sXltFSqtLY%3D
    • Haque R, Roy S, Siddique A, Mondal U, Rahman SM, Mondal D, Houpt E, Petry WA Jr (2007) Multiplex real-time PCR assay for detection of Entamoeba histolytica, Giardia intestinalis, and Cryptosporidium spp. Am J Trop Med Hyg 76:713-717
    • (2007) Am J Trop Med Hyg , vol.76 , pp. 713-717
    • Haque, R.1    Roy, S.2    Siddique, A.3    Mondal, U.4    Rahman, S.M.5    Mondal, D.6    Houpt, E.7    Petry Jr., W.A.8
  • 16
    • 13844257272 scopus 로고    scopus 로고
    • Genetic heterogeneity at the beta-giardin locus among human and animal isolates of Giardia duodenalis and identification of potentially zoonotic subgenotypes
    • 15710441 10.1016/j.ijpara.2004.10.022 1:CAS:528:DC%2BD2MXhtlOms74%3D
    • Lalle M, Pozio E, Capelli G, Bruschi F, Crotti D, Cacciò SM (2005) Genetic heterogeneity at the beta-giardin locus among human and animal isolates of Giardia duodenalis and identification of potentially zoonotic subgenotypes. Int J Parasitol 35:207-213
    • (2005) Int J Parasitol , vol.35 , pp. 207-213
    • Lalle, M.1    Pozio, E.2    Capelli, G.3    Bruschi, F.4    Crotti, D.5    Cacciò, S.M.6
  • 17
  • 19
    • 38649136194 scopus 로고    scopus 로고
    • Characterization of EvaGreen and the implication of its physicochemical properties for qPCR applications
    • 17996102 10.1186/1472-6750-7-76
    • Mao F, Leung WY, Xin X (2007) Characterization of EvaGreen and the implication of its physicochemical properties for qPCR applications. BMC Biotechnol 7:76
    • (2007) BMC Biotechnol , vol.7 , pp. 76
    • Mao, F.1    Leung, W.Y.2    Xin, X.3
  • 20
    • 75249105299 scopus 로고    scopus 로고
    • Campylobacter jejuni and Campylobacter coli genotyping by high-resolution melting analysis of a flaA Fragment
    • 19933351 10.1128/AEM.01164-09 1:CAS:528:DC%2BC3cXksVCit7s%3D
    • Merchant-Patel S, Blackall PJ, Templeton J, Price EP, Tong SY, Huygens F, Giffard PM (2010) Campylobacter jejuni and Campylobacter coli genotyping by high-resolution melting analysis of a flaA Fragment. Appl Environ Microbiol 76(2):493-499
    • (2010) Appl Environ Microbiol , vol.76 , Issue.2 , pp. 493-499
    • Merchant-Patel, S.1    Blackall, P.J.2    Templeton, J.3    Price, E.P.4    Tong, S.Y.5    Huygens, F.6    Giffard, P.M.7
  • 21
    • 0030059343 scopus 로고    scopus 로고
    • Molecular genetic analysis of Giardia intestinalis isolates at the glutamate dehydrogenase locus
    • 8587793 10.1017/S0031182000065021 1:CAS:528:DyaK28Xht1Ggsb0%3D
    • Monis PT, Mayrhofer G, Andrews RH, Homan WL, Limper L, Ey PL (1996) Molecular genetic analysis of Giardia intestinalis isolates at the glutamate dehydrogenase locus. Parasitology 112:1-12
    • (1996) Parasitology , vol.112 , pp. 1-12
    • Monis, P.T.1    Mayrhofer, G.2    Andrews, R.H.3    Homan, W.L.4    Limper, L.5    Ey, P.L.6
  • 22
    • 0032857253 scopus 로고    scopus 로고
    • Molecular systematics of the parasitic protozoan Giardia intestinalis
    • 10486969 10.1093/oxfordjournals.molbev.a026204 1:CAS:528: DyaK1MXmtVWntLY%3D
    • Monis PT, Andrews RH, Mayrhofer G, Ey PL (1999) Molecular systematics of the parasitic protozoan Giardia intestinalis. Mol Biol Evol 16:1135-1144
    • (1999) Mol Biol Evol , vol.16 , pp. 1135-1144
    • Monis, P.T.1    Andrews, R.H.2    Mayrhofer, G.3    Ey, P.L.4
  • 23
    • 0028229267 scopus 로고
    • Complementation of Escherichia coli glycolysis mutant by Giardia lamblia triosephosphate isomerase
    • 8299763 10.1006/expr.1994.1008 1:CAS:528:DyaK2cXmslegt7c%3D
    • Mowatt MR, Weinbach EC, Howard TC, Nash TT (1994) Complementation of Escherichia coli glycolysis mutant by Giardia lamblia triosephosphate isomerase. Exp Parasitol 78:85-92
    • (1994) Exp Parasitol , vol.78 , pp. 85-92
    • Mowatt, M.R.1    Weinbach, E.C.2    Howard, T.C.3    Nash, T.T.4
  • 24
    • 0036153844 scopus 로고    scopus 로고
    • Correlation between genotype of Giardia duodenalis and diarrhoea
    • 11812501 10.1016/S0020-7519(01)00340-X 1:STN:280:DC%2BD38%2FosFCgtw%3D%3D
    • Read C, Walters J, Robertson ID, Thompson RC (2002) Correlation between genotype of Giardia duodenalis and diarrhoea. Int J Parasitol 32:229-231
    • (2002) Int J Parasitol , vol.32 , pp. 229-231
    • Read, C.1    Walters, J.2    Robertson, I.D.3    Thompson, R.C.4
  • 25
    • 34250658870 scopus 로고    scopus 로고
    • High resolution DNA melting analysis for simple and efficient molecular diagnostics
    • 17559349 10.2217/14622416.8.6.597 1:CAS:528:DC%2BD2sXmsFWrtbg%3D
    • Reed G, Kent J, Walters C (2007) High resolution DNA melting analysis for simple and efficient molecular diagnostics. Pharmacogenomics 8:597-608
    • (2007) Pharmacogenomics , vol.8 , pp. 597-608
    • Reed, G.1    Kent, J.2    Walters, C.3
  • 26
    • 33745037760 scopus 로고    scopus 로고
    • Genotyping of Giardia in Dutch patients and animals: A phylogenetic analysis of human and animal isolates
    • 16701663 10.1016/j.ijpara.2006.03.001
    • Van der Giessen JW, de Vries A, Roos M, Wielinqa P, Kortbeek LM, Mank TG (2006) Genotyping of Giardia in Dutch patients and animals: a phylogenetic analysis of human and animal isolates. Int J Parasitol 36(7):849-858
    • (2006) Int J Parasitol , vol.36 , Issue.7 , pp. 849-858
    • Van Der Giessen, J.W.1    De Vries, A.2    Roos, M.3    Wielinqa, P.4    Kortbeek, L.M.5    Mank, T.G.6
  • 27
    • 0025801579 scopus 로고
    • Cloning and restriction enzyme mapping of ribosomal DNA of Giardia duodenalis, Giardia ardeae and Giardia muris
    • 1922199 10.1016/0166-6851(91)90051-7
    • Van Keulen H, Campbell SR, Erlandsen SL, Jarroll EL (1991) Cloning and restriction enzyme mapping of ribosomal DNA of Giardia duodenalis, Giardia ardeae and Giardia muris. Mol Biochem Parasitol 46:275-284
    • (1991) Mol Biochem Parasitol , vol.46 , pp. 275-284
    • Van Keulen, H.1    Campbell, S.R.2    Erlandsen, S.L.3    Jarroll, E.L.4
  • 28
    • 0142071135 scopus 로고    scopus 로고
    • A method for the absolute quantification of cDNA using real time PCR
    • 10.1016/S0022-1759(03)00223-0 1:CAS:528:DC%2BD3sXmvVOht7w%3D
    • Whelan JA, Russel NB, Whelan MA (2003) A method for the absolute quantification of cDNA using real time PCR. J Immunol Meth 278:261-269
    • (2003) J Immunol Meth , vol.278 , pp. 261-269
    • Whelan, J.A.1    Russel, N.B.2    Whelan, M.A.3


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