-
1
-
-
0026658989
-
Isolation of DNA damage-inducible promoters in Escherichia coli: Regulation of polB (dinA), dinG, and dinH by LexA repressor
-
L.K. Lewis, M.E. Jenkins, and D.W. Mount Isolation of DNA damage-inducible promoters in Escherichia coli: regulation of polB (dinA), dinG, and dinH by LexA repressor J. Bacteriol. 174 1992 3377 3385
-
(1992)
J. Bacteriol.
, vol.174
, pp. 3377-3385
-
-
Lewis, L.K.1
Jenkins, M.E.2
Mount, D.W.3
-
2
-
-
0041344536
-
Characterization of the DNA damage-inducible helicase DinG from Escherichia coli
-
O.N. Voloshin, F. Vanevski, P.P. Khil, and R.D. Camerini-Otero Characterization of the DNA damage-inducible helicase DinG from Escherichia coli J. Biol. Chem. 278 2003 28284 28293
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 28284-28293
-
-
Voloshin, O.N.1
Vanevski, F.2
Khil, P.P.3
Camerini-Otero, R.D.4
-
3
-
-
34547133987
-
The DinG protein from Escherichia coli is a structure-specific helicase
-
O.N. Voloshin, and R.D. Camerini-Otero The DinG protein from Escherichia coli is a structure-specific helicase J. Biol. Chem. 282 2007 18437 18447
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 18437-18447
-
-
Voloshin, O.N.1
Camerini-Otero, R.D.2
-
4
-
-
75649142564
-
The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo
-
H. Boubakri, A.L. de Septenville, E. Viguera, and B. Michel The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo EMBO J. 29 2010 145 157
-
(2010)
EMBO J.
, vol.29
, pp. 145-157
-
-
Boubakri, H.1
De Septenville, A.L.2
Viguera, E.3
Michel, B.4
-
5
-
-
33748428875
-
The DNA repair helicases XPD and FancJ have essential iron-sulfur domains
-
J. Rudolf, V. Makrantoni, W.J. Ingledew, M.J.R. Stark, and M.F. White The DNA repair helicases XPD and FancJ have essential iron-sulfur domains Mol. Cell 23 2006 801 808
-
(2006)
Mol. Cell
, vol.23
, pp. 801-808
-
-
Rudolf, J.1
Makrantoni, V.2
Ingledew, W.J.3
Stark, M.J.R.4
White, M.F.5
-
6
-
-
0035176067
-
The xeroderma pigmentosum group D (XPD) gene: One gene, two functions, three diseases
-
A.R. Lehmann The xeroderma pigmentosum group D (XPD) gene: one gene, two functions, three diseases Genes Dev. 15 2001 15 23
-
(2001)
Genes Dev.
, vol.15
, pp. 15-23
-
-
Lehmann, A.R.1
-
7
-
-
34247513888
-
Distinct roles for the XPB/p52 and XPD/p44 subcomplexes of TFIIH in damaged DNA opening during nucleotide excision repair
-
F. Coin, V. Oksenych, and J.M. Egly Distinct roles for the XPB/p52 and XPD/p44 subcomplexes of TFIIH in damaged DNA opening during nucleotide excision repair Mol. Cell 26 2007 245 256
-
(2007)
Mol. Cell
, vol.26
, pp. 245-256
-
-
Coin, F.1
Oksenych, V.2
Egly, J.M.3
-
8
-
-
21844445309
-
Analysis of the DNA substrate specificity of the human BACH1 helicase associated with breast cancer
-
R. Gupta, S. Sharma, J.A. Sommers, Z. Jin, S.B. Cantor, and R.M. Brosh Jr. Analysis of the DNA substrate specificity of the human BACH1 helicase associated with breast cancer J. Biol. Chem. 280 2005 25450 25460
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 25450-25460
-
-
Gupta, R.1
Sharma, S.2
Sommers, J.A.3
Jin, Z.4
Cantor, S.B.5
Brosh, Jr.R.M.6
-
9
-
-
84862908251
-
Biochemical characterization of Warsaw breakage syndrome helicase
-
Y. Wu, J.A. Sommers, I. Khan, J.P. de Winter, and R.M. Brosh Jr. Biochemical characterization of Warsaw breakage syndrome helicase J. Biol. Chem. 287 2012 1007 1021
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 1007-1021
-
-
Wu, Y.1
Sommers, J.A.2
Khan, I.3
De Winter, J.P.4
Brosh, Jr.R.M.5
-
10
-
-
79953147386
-
RTEL1: An essential helicase for telomere maintenance and the regulation of homologous recombination
-
E.J. Uringa, J.L. Youds, K. Lisaingo, P.M. Lansdorp, and S.J. Boulton RTEL1: an essential helicase for telomere maintenance and the regulation of homologous recombination Nucleic Acids Res. 39 2011 1647 1655
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1647-1655
-
-
Uringa, E.J.1
Youds, J.L.2
Lisaingo, K.3
Lansdorp, P.M.4
Boulton, S.J.5
-
11
-
-
38349091095
-
The iron-containing domain is essential in Rad3 helicases for coupling of ATP hydrolysis to DNA translocation and for targeting the helicase to the single-stranded DNA-double-stranded DNA junction
-
R.A. Pugh, M. Honda, H. Leesley, A. Thomas, Y. Lin, M.J. Nilges, I.K. Cann, and M. Spies The iron-containing domain is essential in Rad3 helicases for coupling of ATP hydrolysis to DNA translocation and for targeting the helicase to the single-stranded DNA-double-stranded DNA junction J. Biol. Chem. 283 2008 1732 1743
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 1732-1743
-
-
Pugh, R.A.1
Honda, M.2
Leesley, H.3
Thomas, A.4
Lin, Y.5
Nilges, M.J.6
Cann, I.K.7
Spies, M.8
-
12
-
-
43949110271
-
Structure of the DNA repair helicase XPD
-
H. Liu Structure of the DNA repair helicase XPD Cell 133 2008 801 812
-
(2008)
Cell
, vol.133
, pp. 801-812
-
-
Liu, H.1
-
13
-
-
44149094083
-
XPD helicase structures and activities: Insights into the cancer and aging phenotypes from XPD mutations
-
L. Fan, J.O. Fuss, Q.J. Cheng, A.S. Arvai, M. Hammel, V.A. Roberts, P.K. Cooper, and J.A. Tainer XPD helicase structures and activities: insights into the cancer and aging phenotypes from XPD mutations Cell 133 2008 789 800
-
(2008)
Cell
, vol.133
, pp. 789-800
-
-
Fan, L.1
Fuss, J.O.2
Cheng, Q.J.3
Arvai, A.S.4
Hammel, M.5
Roberts, V.A.6
Cooper, P.K.7
Tainer, J.A.8
-
14
-
-
45849119445
-
Crystal structure of the FeS cluster-containing nucleotide excision repair helicase XPD
-
S.C. Wolski, J. Kuper, P. Hanzelmann, J.J. Truglio, D.L. Croteau, B. Van Houten, and C. Kisker Crystal structure of the FeS cluster-containing nucleotide excision repair helicase XPD PLoS Biol. 6 2008 e149
-
(2008)
PLoS Biol.
, vol.6
, pp. 149
-
-
Wolski, S.C.1
Kuper, J.2
Hanzelmann, P.3
Truglio, J.J.4
Croteau, D.L.5
Van Houten, B.6
Kisker, C.7
-
15
-
-
64149092801
-
Redox control of the DNA damage-inducible protein DinG helicase activity via its iron-sulfur cluster
-
B. Ren, X. Duan, and H. Ding Redox control of the DNA damage-inducible protein DinG helicase activity via its iron-sulfur cluster J. Biol. Chem. 284 2009 4829 4835
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 4829-4835
-
-
Ren, B.1
Duan, X.2
Ding, H.3
-
16
-
-
84870323168
-
Structure, function and evolution of the XPD family of iron-sulfur-containing 5′ → 3′ DNA helicases
-
M.F. White Structure, function and evolution of the XPD family of iron-sulfur-containing 5′ → 3′ DNA helicases Biochem. Soc. Trans. 37 2009 547 551
-
(2009)
Biochem. Soc. Trans.
, vol.37
, pp. 547-551
-
-
White, M.F.1
-
17
-
-
84857029886
-
Iron-sulphur clusters in nucleic acid processing enzymes
-
M.F. White, and M.S. Dillingham Iron-sulphur clusters in nucleic acid processing enzymes Curr. Opin. Struct. Biol. 22 2012 94 100
-
(2012)
Curr. Opin. Struct. Biol.
, vol.22
, pp. 94-100
-
-
White, M.F.1
Dillingham, M.S.2
-
18
-
-
0038401982
-
Identification of additional genes belonging to the LexA regulon in Escherichia coli
-
A.R. Fernandez De Henestrosa, T. Ogi, S. Aoyagi, D. Chafin, J.J. Hayes, H. Ohmori, and R. Woodgate Identification of additional genes belonging to the LexA regulon in Escherichia coli Mol. Microbiol. 35 2000 1560 1572
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 1560-1572
-
-
Fernandez De Henestrosa, A.R.1
Ogi, T.2
Aoyagi, S.3
Chafin, D.4
Hayes, J.J.5
Ohmori, H.6
Woodgate, R.7
-
19
-
-
0022555837
-
Single-stranded DNA binding proteins required for DNA replication
-
J.W. Chase, and K.R. Williams Single-stranded DNA binding proteins required for DNA replication Annu. Rev. Biochem. 55 1986 103 136
-
(1986)
Annu. Rev. Biochem.
, vol.55
, pp. 103-136
-
-
Chase, J.W.1
Williams, K.R.2
-
20
-
-
0028246888
-
Escherichia coli single-stranded DNA-binding protein: Multiple DNA-binding modes and cooperativities
-
T.M. Lohman, and M.E. Ferrari Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities Annu. Rev. Biochem. 63 1994 527 570
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 527-570
-
-
Lohman, T.M.1
Ferrari, M.E.2
-
21
-
-
54349118941
-
SSB as an organizer/mobilizer of genome maintenance complexes
-
R.D. Shereda, A.G. Kozlov, T.M. Lohman, M.M. Cox, and J.L. Keck SSB as an organizer/mobilizer of genome maintenance complexes Crit. Rev. Biochem. Mol. Biol. 43 2008 289 318
-
(2008)
Crit. Rev. Biochem. Mol. Biol.
, vol.43
, pp. 289-318
-
-
Shereda, R.D.1
Kozlov, A.G.2
Lohman, T.M.3
Cox, M.M.4
Keck, J.L.5
-
22
-
-
0034074478
-
Interaction of E. coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease
-
J. Genschel, U. Curth, and C. Urbanke Interaction of E. coli single-stranded DNA binding protein (SSB) with exonuclease I. The carboxy-terminus of SSB is the recognition site for the nuclease Biol. Chem. 381 2000 183 192
-
(2000)
Biol. Chem.
, vol.381
, pp. 183-192
-
-
Genschel, J.1
Curth, U.2
Urbanke, C.3
-
23
-
-
34547121734
-
A central role for SSB in Escherichia coli RecQ DNA helicase function
-
R.D. Shereda, D.A. Bernstein, and J.L. Keck A central role for SSB in Escherichia coli RecQ DNA helicase function J. Biol. Chem. 282 2007 19247 19258
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 19247-19258
-
-
Shereda, R.D.1
Bernstein, D.A.2
Keck, J.L.3
-
24
-
-
59649104376
-
Identification of the SSB binding site on E. coli RecQ reveals a conserved surface for binding SSB's C terminus
-
R.D. Shereda, N.J. Reiter, S.E. Butcher, and J.L. Keck Identification of the SSB binding site on E. coli RecQ reveals a conserved surface for binding SSB's C terminus J. Mol. Biol. 386 2009 612 625
-
(2009)
J. Mol. Biol.
, vol.386
, pp. 612-625
-
-
Shereda, R.D.1
Reiter, N.J.2
Butcher, S.E.3
Keck, J.L.4
-
25
-
-
0033534380
-
Trading places on DNA - A three-point switch underlies primer handoff from primase to the replicative DNA polymerase
-
A. Yuzhakov, Z. Kelman, and M. O'Donnell Trading places on DNA - a three-point switch underlies primer handoff from primase to the replicative DNA polymerase Cell 96 1999 153 163
-
(1999)
Cell
, vol.96
, pp. 153-163
-
-
Yuzhakov, A.1
Kelman, Z.2
O'Donnell, M.3
-
26
-
-
80055089237
-
Mechanism of Exonuclease i stimulation by the single-stranded DNA-binding protein
-
D. Lu, A.R. Myers, N.P. George, and J.L. Keck Mechanism of Exonuclease I stimulation by the single-stranded DNA-binding protein Nucleic Acids Res. 39 2011 6536 6545
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 6536-6545
-
-
Lu, D.1
Myers, A.R.2
George, N.P.3
Keck, J.L.4
-
27
-
-
0035907374
-
Chimeras between single-stranded DNA-binding proteins from Escherichia coli and Mycobacterium tuberculosis reveal that their C-terminal domains interact with uracil DNA glycosylases
-
P. Handa, N. Acharya, and U. Varshney Chimeras between single-stranded DNA-binding proteins from Escherichia coli and Mycobacterium tuberculosis reveal that their C-terminal domains interact with uracil DNA glycosylases J. Biol. Chem. 276 2001 16992 16997
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 16992-16997
-
-
Handa, P.1
Acharya, N.2
Varshney, U.3
-
28
-
-
0043163774
-
DNA polymerase III chi subunit ties single-stranded DNA binding protein to the bacterial replication machinery
-
G. Witte, C. Urbanke, and U. Curth DNA polymerase III chi subunit ties single-stranded DNA binding protein to the bacterial replication machinery Nucleic Acids Res. 31 2003 4434 4440
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 4434-4440
-
-
Witte, G.1
Urbanke, C.2
Curth, U.3
-
29
-
-
43749084397
-
Single-stranded DNA-binding protein recruits DNA polymerase v to primer termini on RecA-coated DNA
-
G. Arad, A. Hendel, C. Urbanke, U. Curth, and Z. Livneh Single-stranded DNA-binding protein recruits DNA polymerase V to primer termini on RecA-coated DNA J. Biol. Chem. 283 2008 8274 8282
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 8274-8282
-
-
Arad, G.1
Hendel, A.2
Urbanke, C.3
Curth, U.4
Livneh, Z.5
-
30
-
-
44949225070
-
Resolution of converging replication forks by RecQ and topoisomerase III
-
C. Suski, and K.J. Marians Resolution of converging replication forks by RecQ and topoisomerase III Mol. Cell 30 2008 779 789
-
(2008)
Mol. Cell
, vol.30
, pp. 779-789
-
-
Suski, C.1
Marians, K.J.2
-
31
-
-
13444282478
-
PriA helicase and SSB interact physically and functionally
-
C.J. Cadman, and P. McGlynn PriA helicase and SSB interact physically and functionally Nucleic Acids Res. 32 2004 6378 6387
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 6378-6387
-
-
Cadman, C.J.1
McGlynn, P.2
-
32
-
-
58749113648
-
RecG interacts directly with SSB: Implications for stalled replication fork regression
-
J.A. Buss, Y. Kimura, and P.R. Bianco RecG interacts directly with SSB: implications for stalled replication fork regression Nucleic Acids Res. 36 2008 7029 7042
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 7029-7042
-
-
Buss, J.A.1
Kimura, Y.2
Bianco, P.R.3
-
33
-
-
79960790784
-
Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein
-
M. Ryzhikov, O. Koroleva, D. Postnov, A. Tran, and S. Korolev Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein Nucleic Acids Res. 39 2011 6305 6314
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 6305-6314
-
-
Ryzhikov, M.1
Koroleva, O.2
Postnov, D.3
Tran, A.4
Korolev, S.5
-
34
-
-
79953180050
-
A mechanism for single-stranded DNA-binding protein (SSB) displacement from single-stranded DNA upon SSB-RecO interaction
-
J. Inoue, T. Nagae, M. Mishima, Y. Ito, T. Shibata, and T. Mikawa A mechanism for single-stranded DNA-binding protein (SSB) displacement from single-stranded DNA upon SSB-RecO interaction J. Biol. Chem. 286 2011 6720 6732
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 6720-6732
-
-
Inoue, J.1
Nagae, T.2
Mishima, M.3
Ito, Y.4
Shibata, T.5
Mikawa, T.6
-
35
-
-
79953294532
-
Structure and biochemical activities of Escherichia coli MgsA
-
A.N. Page, N.P. George, A.H. Marceau, M.M. Cox, and J.L. Keck Structure and biochemical activities of Escherichia coli MgsA J. Biol. Chem. 286 2011 12075 12085
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 12075-12085
-
-
Page, A.N.1
George, N.P.2
Marceau, A.H.3
Cox, M.M.4
Keck, J.L.5
-
36
-
-
48249095036
-
Structural basis of Escherichia coli single-stranded DNA-binding protein stimulation of exonuclease i
-
D. Lu, and J.L. Keck Structural basis of Escherichia coli single-stranded DNA-binding protein stimulation of exonuclease I Proc. Natl. Acad. Sci. USA 105 2008 9169 9174
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 9169-9174
-
-
Lu, D.1
Keck, J.L.2
-
37
-
-
34948867321
-
Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks
-
F. Lecointe Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks EMBO J. 26 2007 4239 4251
-
(2007)
EMBO J.
, vol.26
, pp. 4239-4251
-
-
Lecointe, F.1
-
38
-
-
53549120600
-
Ferroplasma acidarmanus RPA2 facilitates efficient unwinding of forked DNA substrates by monomers of FacXPD helicase
-
R.A. Pugh, Y. Lin, C. Eller, H. Leesley, I.K. Cann, and M. Spies Ferroplasma acidarmanus RPA2 facilitates efficient unwinding of forked DNA substrates by monomers of FacXPD helicase J. Mol. Biol. 383 2008 982 998
-
(2008)
J. Mol. Biol.
, vol.383
, pp. 982-998
-
-
Pugh, R.A.1
Lin, Y.2
Eller, C.3
Leesley, H.4
Cann, I.K.5
Spies, M.6
-
39
-
-
69749086880
-
Single-molecule analysis reveals differential effect of ssDNA-binding proteins on DNA translocation by XPD helicase
-
M. Honda, J. Park, R.A. Pugh, T. Ha, and M. Spies Single-molecule analysis reveals differential effect of ssDNA-binding proteins on DNA translocation by XPD helicase Mol. Cell 35 2009 694 703
-
(2009)
Mol. Cell
, vol.35
, pp. 694-703
-
-
Honda, M.1
Park, J.2
Pugh, R.A.3
Ha, T.4
Spies, M.5
-
40
-
-
2342516683
-
Physical and functional interaction of the archaeal single-stranded DNA-binding protein SSB with RNA polymerase
-
D.J. Richard, S.D. Bell, and M.F. White Physical and functional interaction of the archaeal single-stranded DNA-binding protein SSB with RNA polymerase Nucleic Acids Res. 32 2004 1065 1074
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1065-1074
-
-
Richard, D.J.1
Bell, S.D.2
White, M.F.3
-
41
-
-
0030848209
-
Role of protein-protein interactions in the function of replication protein A (RPA): RPA modulates the activity of DNA polymerase alpha by multiple mechanisms
-
K.A. Braun, Y. Lao, Z. He, C.J. Ingles, and M.S. Wold Role of protein-protein interactions in the function of replication protein A (RPA): RPA modulates the activity of DNA polymerase alpha by multiple mechanisms Biochemistry 36 1997 8443 8454
-
(1997)
Biochemistry
, vol.36
, pp. 8443-8454
-
-
Braun, K.A.1
Lao, Y.2
He, Z.3
Ingles, C.J.4
Wold, M.S.5
-
42
-
-
67650563908
-
FANCJ helicase uniquely senses oxidative base damage in either strand of duplex DNA and is stimulated by replication protein A to unwind the damaged DNA substrate in a strand-specific manner
-
A.N. Suhasini, J.A. Sommers, A.C. Mason, O.N. Voloshin, R.D. Camerini-Otero, M.S. Wold, and R.M. Brosh Jr. FANCJ helicase uniquely senses oxidative base damage in either strand of duplex DNA and is stimulated by replication protein A to unwind the damaged DNA substrate in a strand-specific manner J. Biol. Chem. 284 2009 18458 18470
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 18458-18470
-
-
Suhasini, A.N.1
Sommers, J.A.2
Mason, A.C.3
Voloshin, O.N.4
Camerini-Otero, R.D.5
Wold, M.S.6
Brosh, Jr.R.M.7
-
43
-
-
44949114282
-
FANCJ helicase defective in Fanconia anemia and breast cancer unwinds G-quadruplex DNA to defend genomic stability
-
Y. Wu, K. Shin-ya, and R.M. Brosh Jr. FANCJ helicase defective in Fanconia anemia and breast cancer unwinds G-quadruplex DNA to defend genomic stability Mol. Cell. Biol. 28 2008 4116 4128
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 4116-4128
-
-
Wu, Y.1
Shin-Ya, K.2
Brosh, Jr.R.M.3
-
44
-
-
78951472460
-
Replication protein A promotes 5′ → 3′ end processing during homology-dependent DNA double-strand break repair
-
H. Yan, T. Toczylowski, J. McCane, C. Chen, and S. Liao Replication protein A promotes 5′ → 3′ end processing during homology-dependent DNA double-strand break repair J. Cell Biol. 192 2011 251 261
-
(2011)
J. Cell Biol.
, vol.192
, pp. 251-261
-
-
Yan, H.1
Toczylowski, T.2
McCane, J.3
Chen, C.4
Liao, S.5
|