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Volumn 100, Issue 5, 2012, Pages 289-296

Evolutionary history of linked D4Z4 and Beta satellite clusters at the FSHD locus (4q35)

Author keywords

4q35; Beta satellite; Chimpanzee; D4Z4; FSHD; Primate evolution

Indexed keywords

ARTICLE; BETA SATELLITE; CHIMPANZEE; CHROMOSOME 10Q; CHROMOSOME 3P; CHROMOSOME 4Q; CHROMOSOME SATELLITE; D4Z4 SATELLITE; FACIOSCAPULOHUMERAL MUSCULAR DYSTROPHY; GENE CLUSTER; GENE LOCUS; GENETIC CONSERVATION; GENETIC LINKAGE; GENETIC ORGANIZATION; GENOME SIZE; MOLECULAR EVOLUTION; NEUROPATHOLOGY; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; SEQUENCE HOMOLOGY;

EID: 84867905841     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2012.07.011     Document Type: Article
Times cited : (4)

References (42)
  • 1
    • 0018894384 scopus 로고
    • Selfish genes, the phenotype paradigm and genome evolution
    • Doolittle W.F., Sapienza C. Selfish genes, the phenotype paradigm and genome evolution. Nature 1980, 284:601-603.
    • (1980) Nature , vol.284 , pp. 601-603
    • Doolittle, W.F.1    Sapienza, C.2
  • 2
    • 0018857680 scopus 로고
    • Selfish DNA: the ultimate parasite
    • Orgel L.E., Crick F.H. Selfish DNA: the ultimate parasite. Nature 1980, 284:604-607.
    • (1980) Nature , vol.284 , pp. 604-607
    • Orgel, L.E.1    Crick, F.H.2
  • 3
    • 41649088383 scopus 로고    scopus 로고
    • Regulation of mammalian gene expression by retroelements and non-coding tandem repeats
    • Tomilin N.V. Regulation of mammalian gene expression by retroelements and non-coding tandem repeats. Bioessays 2008, 30:338-348.
    • (2008) Bioessays , vol.30 , pp. 338-348
    • Tomilin, N.V.1
  • 4
    • 27844475695 scopus 로고    scopus 로고
    • Functional elements residing within satellite DNAs
    • Ugrakovic D. Functional elements residing within satellite DNAs. EMBO Rep. 2005, 6:1035-1039.
    • (2005) EMBO Rep. , vol.6 , pp. 1035-1039
    • Ugrakovic, D.1
  • 7
    • 26244462968 scopus 로고    scopus 로고
    • Preservation and high sequence conservation of satellite DNAs suggest functional constraints
    • Mravinac B., Plohl M., Ugarkovic D. Preservation and high sequence conservation of satellite DNAs suggest functional constraints. J. Mol. Evol. 2005, 61:542-550.
    • (2005) J. Mol. Evol. , vol.61 , pp. 542-550
    • Mravinac, B.1    Plohl, M.2    Ugarkovic, D.3
  • 8
    • 80052443371 scopus 로고    scopus 로고
    • Facioscapulohumeral muscular dystrophy: molecular pathological advances and future directions
    • Statland J.M., Tawil R. Facioscapulohumeral muscular dystrophy: molecular pathological advances and future directions. Curr. Opin. Neurol. 2011, 24:423-428.
    • (2011) Curr. Opin. Neurol. , vol.24 , pp. 423-428
    • Statland, J.M.1    Tawil, R.2
  • 9
    • 79955664112 scopus 로고    scopus 로고
    • Facioscapulohumeral muscular dystrophy and DUX4: breaking the silence
    • van der Maarel S.M., Tawil R., Tapscott S.J. Facioscapulohumeral muscular dystrophy and DUX4: breaking the silence. Trends Mol. Med. 2011, 17:252-258.
    • (2011) Trends Mol. Med. , vol.17 , pp. 252-258
    • van der Maarel, S.M.1    Tawil, R.2    Tapscott, S.J.3
  • 10
    • 78650148935 scopus 로고    scopus 로고
    • The cell biology of disease: FSHD: copy number variations on the theme of muscular dystrophy
    • Cabianca D.S., Gabellini D. The cell biology of disease: FSHD: copy number variations on the theme of muscular dystrophy. J. Cell Biol. 2010, 191:1049-1060.
    • (2010) J. Cell Biol. , vol.191 , pp. 1049-1060
    • Cabianca, D.S.1    Gabellini, D.2
  • 15
    • 0345227304 scopus 로고    scopus 로고
    • Testing the position-effect variegation hypothesis for facioscapulohumeral muscular dystrophy by analysis of histone modification and gene expression in subtelomeric 4q
    • Jiang G., Yang F., van Overveld P.G., Vedanarayanan V., van der Maarel S., Ehrlich M. Testing the position-effect variegation hypothesis for facioscapulohumeral muscular dystrophy by analysis of histone modification and gene expression in subtelomeric 4q. Hum. Mol. Genet. 2003, 12:2909-2921.
    • (2003) Hum. Mol. Genet. , vol.12 , pp. 2909-2921
    • Jiang, G.1    Yang, F.2    van Overveld, P.G.3    Vedanarayanan, V.4    van der Maarel, S.5    Ehrlich, M.6
  • 19
    • 0035169663 scopus 로고    scopus 로고
    • Methyl-CpG-binding proteins. Targeting specific gene repression
    • Ballestar E., Wolffe A.P. Methyl-CpG-binding proteins. Targeting specific gene repression. Eur. J. Biochem. 2001, 268:1-6.
    • (2001) Eur. J. Biochem. , vol.268 , pp. 1-6
    • Ballestar, E.1    Wolffe, A.P.2
  • 21
    • 37549005500 scopus 로고    scopus 로고
    • Facioscapulohumeral dystrophy
    • Pandya S., King W., Tawil R. Facioscapulohumeral dystrophy. Phys. Ther. 2008, 88:105-113.
    • (2008) Phys. Ther. , vol.88 , pp. 105-113
    • Pandya, S.1    King, W.2    Tawil, R.3
  • 23
    • 15944403656 scopus 로고    scopus 로고
    • The genes encoding for D4Z4-binding proteins HMGB2, YY1, NCL and MYOD are excluded as candidate genes for FSDH1B
    • Bastress K.L., Stajich J.M., Speer M.C., Gilbert J.R. The genes encoding for D4Z4-binding proteins HMGB2, YY1, NCL and MYOD are excluded as candidate genes for FSDH1B. Neuromuscul. Disord. 2005, 15:316-320.
    • (2005) Neuromuscul. Disord. , vol.15 , pp. 316-320
    • Bastress, K.L.1    Stajich, J.M.2    Speer, M.C.3    Gilbert, J.R.4
  • 27
    • 84875382065 scopus 로고    scopus 로고
    • Primate Cytogenetics http://www.biologia.uniba.it/primates/cell_lines.html.
    • Primate Cytogenetics
  • 28
    • 0032730013 scopus 로고    scopus 로고
    • Genomic differentiation of 18S ribosomal DNA and Beta satellite DNA in the hominoid and its evolutionary aspects
    • Hirai H., Taguchi T., Godwin A.K. Genomic differentiation of 18S ribosomal DNA and Beta satellite DNA in the hominoid and its evolutionary aspects. Chromosome Res. 1999, 7:531-540.
    • (1999) Chromosome Res. , vol.7 , pp. 531-540
    • Hirai, H.1    Taguchi, T.2    Godwin, A.K.3
  • 29
    • 4143120997 scopus 로고    scopus 로고
    • Evolution of beta satellite DNA sequences: evidence for duplication-mediated repeat amplification and spreading
    • Cardone M.F., Ballarati L., Ventura M., Rocchi M., Marozzi A., Ginelli E., Meneveri R. Evolution of beta satellite DNA sequences: evidence for duplication-mediated repeat amplification and spreading. Mol. Biol. Evol. 2004, 21:1792-1799.
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 1792-1799
    • Cardone, M.F.1    Ballarati, L.2    Ventura, M.3    Rocchi, M.4    Marozzi, A.5    Ginelli, E.6    Meneveri, R.7
  • 30
    • 61449176890 scopus 로고    scopus 로고
    • Comparative sequence analysis of primate subtelomeres originating from a chromosome fission event
    • NISC Comparative Sequencing Program
    • Rudd M.K., Endicott R.M., Friedman C., Walker M., Young J.M., Osoegawa K., de Jong P.J., Green E.D., Trask B.J. Comparative sequence analysis of primate subtelomeres originating from a chromosome fission event. Genome Res. 2009, 19:33-41. NISC Comparative Sequencing Program.
    • (2009) Genome Res. , vol.19 , pp. 33-41
    • Rudd, M.K.1    Endicott, R.M.2    Friedman, C.3    Walker, M.4    Young, J.M.5    Osoegawa, K.6    de Jong, P.J.7    Green, E.D.8    Trask, B.J.9
  • 31
    • 0029798271 scopus 로고    scopus 로고
    • The evolutionary distribution and structural organization of the homeobox-containing repeat D4Z4 indicates a functional role for the ancestral copy in the FSHD region
    • Winokur S.T., Bengtsson U., Vargas J.C., Wasmuth J.J., Altherr M.R., Weiffenbach B., Jacobsen S.J. The evolutionary distribution and structural organization of the homeobox-containing repeat D4Z4 indicates a functional role for the ancestral copy in the FSHD region. Hum. Mol. Genet. 1996, 5:1567-1755.
    • (1996) Hum. Mol. Genet. , vol.5 , pp. 1567-1755
    • Winokur, S.T.1    Bengtsson, U.2    Vargas, J.C.3    Wasmuth, J.J.4    Altherr, M.R.5    Weiffenbach, B.6    Jacobsen, S.J.7
  • 33
    • 78649330207 scopus 로고    scopus 로고
    • A family history of DUX4: phylogenetic analysis of DUXA, B, C and Duxbl reveals the ancestral DUX gene
    • Leidenroth A., Hewitt J.E. A family history of DUX4: phylogenetic analysis of DUXA, B, C and Duxbl reveals the ancestral DUX gene. BMC Evol. Biol. 2010, 10:364-376.
    • (2010) BMC Evol. Biol. , vol.10 , pp. 364-376
    • Leidenroth, A.1    Hewitt, J.E.2
  • 34
    • 77954122499 scopus 로고    scopus 로고
    • In junk we trust: repetitive DNA, epigenetics and facioscapulohumeral muscular dystrophy
    • Neguembor M.V., Gabellini D. In junk we trust: repetitive DNA, epigenetics and facioscapulohumeral muscular dystrophy. Epigenomics 2010, 2:271-287.
    • (2010) Epigenomics , vol.2 , pp. 271-287
    • Neguembor, M.V.1    Gabellini, D.2
  • 35
    • 7244252921 scopus 로고    scopus 로고
    • The 4q subtelomere harboring the FSHD locus is specifically anchored with peripheral heterochromatin unlike most human telomeres
    • Tam R., Smith K.P., Lawrence J.B. The 4q subtelomere harboring the FSHD locus is specifically anchored with peripheral heterochromatin unlike most human telomeres. J. Cell Biol. 2004, 167:269-279.
    • (2004) J. Cell Biol. , vol.167 , pp. 269-279
    • Tam, R.1    Smith, K.P.2    Lawrence, J.B.3
  • 38
    • 0037047439 scopus 로고    scopus 로고
    • Inappropriate gene activation in FSHD: a repressor complex binds a chromosomal repeat deleted in dystrophic muscle
    • Gabellini D., Green M.R., Tupler R. Inappropriate gene activation in FSHD: a repressor complex binds a chromosomal repeat deleted in dystrophic muscle. Cell 2002, 110:339-348.
    • (2002) Cell , vol.110 , pp. 339-348
    • Gabellini, D.1    Green, M.R.2    Tupler, R.3
  • 39
    • 69149087644 scopus 로고    scopus 로고
    • Remodeling of the chromatin structure of the facioscapulohumeral muscular dystrophy (FSHD) locus and upregulation of FSHD-related gene 1 (FRG1) expression during human myogenic differentiation
    • Bodega B., Ramirez G.D., Grasser F., Cheli S., Brunelli S., Mora M., Meneveri R., Marozzi A., Mueller S., Battaglioli E., Ginelli E. Remodeling of the chromatin structure of the facioscapulohumeral muscular dystrophy (FSHD) locus and upregulation of FSHD-related gene 1 (FRG1) expression during human myogenic differentiation. BMC Biol. 2009, 7:41.
    • (2009) BMC Biol. , vol.7 , pp. 41
    • Bodega, B.1    Ramirez, G.D.2    Grasser, F.3    Cheli, S.4    Brunelli, S.5    Mora, M.6    Meneveri, R.7    Marozzi, A.8    Mueller, S.9    Battaglioli, E.10    Ginelli, E.11
  • 42
    • 0024517748 scopus 로고
    • Linkage in human heterochromatin between highly divergent Sau3A repeats and a new family of repeated DNA sequences (HaeIII family)
    • Agresti A., Meneveri R., Siccardi A.G., Marozzi A., Corneo G., Gaudi S., Ginelli E. Linkage in human heterochromatin between highly divergent Sau3A repeats and a new family of repeated DNA sequences (HaeIII family). J. Mol. Biol. 1989, 205:625-631.
    • (1989) J. Mol. Biol. , vol.205 , pp. 625-631
    • Agresti, A.1    Meneveri, R.2    Siccardi, A.G.3    Marozzi, A.4    Corneo, G.5    Gaudi, S.6    Ginelli, E.7


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