-
1
-
-
0025345233
-
Structural characteristics of alpha-helical peptide molecules containing Aib residues
-
Karle IL, Balaram P. Structural characteristics of alpha-helical peptide molecules containing Aib residues. Biochemistry 1990; 29: 6747-6756.
-
(1990)
Biochemistry
, vol.29
, pp. 6747-6756
-
-
Karle, I.L.1
Balaram, P.2
-
2
-
-
70349391484
-
-
VHCA, Zürich, Switzerland and Wiley-VCH: Weinheim, Germany
-
Toniolo, C., Brückner, H. Peptaibiotics - Fungal Peptides Containing α-Alkyl α-Amino Acids. VHCA, Zürich, Switzerland and Wiley-VCH: Weinheim, Germany, 2009.
-
(2009)
Peptaibiotics - Fungal Peptides Containing α-Alkyl α-Amino Acids
-
-
Toniolo, C.1
Brückner, H.2
-
3
-
-
79953012489
-
-
Mukherjee PK, Wiest A, Ruiz N, Keightley A, Moran-Diez ME, McCluskey K, Pouchus YF, Kenerley CM. J. Biol. Chem. 2011; 286: 4544-4554.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 4544-4554
-
-
Mukherjee, P.K.1
Wiest, A.2
Ruiz, N.3
Keightley, A.4
Moran-Diez, M.E.5
McCluskey, K.6
Pouchus, Y.F.7
Kenerley, C.M.8
-
4
-
-
84859067721
-
The production of multiple small-peptaibol families by single 14-module peptide synthetases in Trichoderma/Hypocrea
-
Degenkolb T, Karimi Aghkcheh R, Dieckmann R, Neuhof T, Baker SE, Druzhinina IS, Kubicek CP, Brückner H, von Döhren H. The production of multiple small-peptaibol families by single 14-module peptide synthetases in Trichoderma/Hypocrea. Chem. Biodivers. 2012; 9: 499-535.
-
(2012)
Chem. Biodivers.
, vol.9
, pp. 499-535
-
-
Degenkolb, T.1
Karimi Aghkcheh, R.2
Dieckmann, R.3
Neuhof, T.4
Baker, S.E.5
Druzhinina, I.S.6
Kubicek, C.P.7
Brückner, H.8
von Döhren, H.9
-
6
-
-
0032526416
-
The structure and function of antiamoebin I, a proline-rich membrane-active polypeptide
-
Snook CF, Woolley GA, Oliva G, Pattabhi V, Wood SF, Blundell TL, Wallace BA. The structure and function of antiamoebin I, a proline-rich membrane-active polypeptide. Structure 1998; 6: 783-792.
-
(1998)
Structure
, vol.6
, pp. 783-792
-
-
Snook, C.F.1
Woolley, G.A.2
Oliva, G.3
Pattabhi, V.4
Wood, S.F.5
Blundell, T.L.6
Wallace, B.A.7
-
7
-
-
0032510799
-
Crystal structure of the channel-forming polypeptide antiamoebin in a membrane-mimetic environment
-
Karle IL, Perozzo MA, Mishra VK, Balaram P. Crystal structure of the channel-forming polypeptide antiamoebin in a membrane-mimetic environment. Proc. Natl. Acad. Sci. U S A 1998; 95: 5501-5504.
-
(1998)
Proc. Natl. Acad. Sci. U S A
, vol.95
, pp. 5501-5504
-
-
Karle, I.L.1
Perozzo, M.A.2
Mishra, V.K.3
Balaram, P.4
-
9
-
-
0017126645
-
Samarosporin, a new peptide antibiotic. I. Fermentation, isolation and characterization
-
Inoue N, Inoue A, Furukawa M, Kanda N. Samarosporin, a new peptide antibiotic. I. Fermentation, isolation and characterization. J. Antibiot. (Tokyo) 1976; 29: 618-622.
-
(1976)
J. Antibiot. (Tokyo)
, vol.29
, pp. 618-622
-
-
Inoue, N.1
Inoue, A.2
Furukawa, M.3
Kanda, N.4
-
10
-
-
0018859418
-
Gas chromatographic determination of the configuration of isovaline in antiamoebin, samarosporin (emerimicin IV), stibellin, suzukacillins and trichotoxins
-
Brückner H, Nicholson G, Jung G, Kruse K, König WA. Gas chromatographic determination of the configuration of isovaline in antiamoebin, samarosporin (emerimicin IV), stibellin, suzukacillins and trichotoxins. Chromatographia 1980; 13: 209-213.
-
(1980)
Chromatographia
, vol.13
, pp. 209-213
-
-
Brückner, H.1
Nicholson, G.2
Jung, G.3
Kruse, K.4
König, W.A.5
-
11
-
-
0000956677
-
Chromatographic and mass spectrometric characterization of the structures of the polypeptide antibiotics samarosporin and stilbellin and identity with emerimicin
-
Brückner H, Jung G, Przybylski M. Chromatographic and mass spectrometric characterization of the structures of the polypeptide antibiotics samarosporin and stilbellin and identity with emerimicin. Chromatographia 1983; 17: 678-685.
-
(1983)
Chromatographia
, vol.17
, pp. 678-685
-
-
Brückner, H.1
Jung, G.2
Przybylski, M.3
-
12
-
-
0020038581
-
Structures of eleven zervamicin and two emerimicin peptide antibiotics studied by fast atom bombardment mass spectrometry
-
Rinehart KL, Gaudioso LA, Moore ML, Pandey RC, Cook JC, Barber M, Sedgwick RD, Bordoli RS, Tyler AN, Green BN. Structures of eleven zervamicin and two emerimicin peptide antibiotics studied by fast atom bombardment mass spectrometry. J. Am. Chem. Soc 1981; 103: 6517-6520.
-
(1981)
J. Am. Chem. Soc
, vol.103
, pp. 6517-6520
-
-
Rinehart, K.L.1
Gaudioso, L.A.2
Moore, M.L.3
Pandey, R.C.4
Cook, J.C.5
Barber, M.6
Sedgwick, R.D.7
Bordoli, R.S.8
Tyler, A.N.9
Green, B.N.10
-
13
-
-
79960421148
-
Synthesis, preferred conformation, protease stability, and membrane activity of heptaibin, a medium-length peptaibiotic
-
De Zotti M, Biondi B, Peggion C, Park Y, Hahm KS, Formaggio F, Toniolo C. Synthesis, preferred conformation, protease stability, and membrane activity of heptaibin, a medium-length peptaibiotic. J Pept Sci. 2011; 17: 585-594.
-
(2011)
J Pept Sci.
, vol.17
, pp. 585-594
-
-
De Zotti, M.1
Biondi, B.2
Peggion, C.3
Park, Y.4
Hahm, K.S.5
Formaggio, F.6
Toniolo, C.7
-
14
-
-
0033868405
-
Heptaibin, a novel antifungal peptaibol antibiotic from Emericellopsis sp. BAUA8289
-
Ishiyama D, Satou T, Senda H, Fujimaki T, Honda R, Kanazawa S. Heptaibin, a novel antifungal peptaibol antibiotic from Emericellopsis sp. BAUA8289. J. Antibiot. (Tokyo) 2000; 53: 728-732.
-
(2000)
J. Antibiot. (Tokyo)
, vol.53
, pp. 728-732
-
-
Ishiyama, D.1
Satou, T.2
Senda, H.3
Fujimaki, T.4
Honda, R.5
Kanazawa, S.6
-
15
-
-
0017401606
-
Structures of the peptide antibiotics. Emerimicins III and IV
-
Pandey RC, Cook JC, Rinehart KL. Structures of the peptide antibiotics. Emerimicins III and IV. J. Am. Chem Soc. 1977; 99: 5205-5206.
-
(1977)
J. Am. Chem Soc.
, vol.99
, pp. 5205-5206
-
-
Pandey, R.C.1
Cook, J.C.2
Rinehart, K.L.3
-
16
-
-
1642618117
-
New sequences and new fungal producers of peptaibol antibiotics antiamoebins
-
Jaworski A, Brückner H. New sequences and new fungal producers of peptaibol antibiotics antiamoebins. J. Pept. Sci. 2000; 6: 149-167.
-
(2000)
J. Pept. Sci.
, vol.6
, pp. 149-167
-
-
Jaworski, A.1
Brückner, H.2
-
17
-
-
23844492128
-
Membrane association and activity of 15/16-membered peptide antibiotics: zervamicin IIB, ampullosporin A and antiamoebin I
-
Kropacheva TN, Salnikov ES, Nguyen HH, Reissmann S, Yakimenko ZA, Tagaev AA, Ovchinnikova TV, Raap J. Membrane association and activity of 15/16-membered peptide antibiotics: zervamicin IIB, ampullosporin A and antiamoebin I. Biochim. Biophys. Acta 2005; 1715: 6-18.
-
(2005)
Biochim. Biophys. Acta
, vol.1715
, pp. 6-18
-
-
Kropacheva, T.N.1
Salnikov, E.S.2
Nguyen, H.H.3
Reissmann, S.4
Yakimenko, Z.A.5
Tagaev, A.A.6
Ovchinnikova, T.V.7
Raap, J.8
-
18
-
-
0032466175
-
Antiamoebin can function as a carrier or as a pore-forming peptaibol
-
Duclohier H, Snook CF, Wallace BA. Antiamoebin can function as a carrier or as a pore-forming peptaibol. Biochim. Biophys. Acta 1998; 1415: 255-260.
-
(1998)
Biochim. Biophys. Acta
, vol.1415
, pp. 255-260
-
-
Duclohier, H.1
Snook, C.F.2
Wallace, B.A.3
-
19
-
-
0019323459
-
The lowest conductance state of the alamethicin pore
-
Hanke W, Boheim G. The lowest conductance state of the alamethicin pore. Biochim. Biophys. Acta 1980; 596: 456-462.
-
(1980)
Biochim. Biophys. Acta
, vol.596
, pp. 456-462
-
-
Hanke, W.1
Boheim, G.2
-
20
-
-
12244260054
-
Solution NMR studies of antiamoebin, a membrane channel-forming polypeptide
-
Galbraith TP, Harris R, Driscoll PC, Wallace BA. Solution NMR studies of antiamoebin, a membrane channel-forming polypeptide. Biophys. J. 2003; 84: 185-194.
-
(2003)
Biophys. J.
, vol.84
, pp. 185-194
-
-
Galbraith, T.P.1
Harris, R.2
Driscoll, P.C.3
Wallace, B.A.4
-
21
-
-
79959643733
-
Molecular dynamics simulation of the antiamoebin ion channel: linking structure and conductance
-
Wilson MA, Wei C, Bjelkmar P, Wallace BA, Pohorille A. Molecular dynamics simulation of the antiamoebin ion channel: linking structure and conductance. Biophys. J. 2011; 100: 2394-2402.
-
(2011)
Biophys. J.
, vol.100
, pp. 2394-2402
-
-
Wilson, M.A.1
Wei, C.2
Bjelkmar, P.3
Wallace, B.A.4
Pohorille, A.5
-
22
-
-
34447318076
-
Antiamoebin I in methanol solution: rapid exchange between right-handed and left-handed 3(10)-helical conformations
-
Shenkarev ZO, Paramonov AS, Nadezhdin KD, Bocharov EV, Kudelina IA, Skladnev DA, Tagaev AA, Yakimenko ZA, Ovchinnikova TV, Arseniev AS. Antiamoebin I in methanol solution: rapid exchange between right-handed and left-handed 3(10)-helical conformations. Chem. Biodivers. 2007; 4: 1219-1242.
-
(2007)
Chem. Biodivers.
, vol.4
, pp. 1219-1242
-
-
Shenkarev, Z.O.1
Paramonov, A.S.2
Nadezhdin, K.D.3
Bocharov, E.V.4
Kudelina, I.A.5
Skladnev, D.A.6
Tagaev, A.A.7
Yakimenko, Z.A.8
Ovchinnikova, T.V.9
Arseniev, A.S.10
-
23
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Overview of the CCP4 suite and current developments. Acta Crystallogr. D 2011; 67: 235-242.
-
(2011)
Acta Crystallogr. D
, vol.67
, pp. 235-242
-
-
-
24
-
-
79953747244
-
An introduction to data reduction: space-group determination, scaling and intensity statistics
-
Evans PR. An introduction to data reduction: space-group determination, scaling and intensity statistics. Acta Crystallogr. D 2011; 67: 282-292.
-
(2011)
Acta Crystallogr. D
, vol.67
, pp. 282-292
-
-
Evans, P.R.1
-
25
-
-
75649151032
-
Xia2: an expert system for macromolecular crystallography data reduction
-
Winter G. Xia2: an expert system for macromolecular crystallography data reduction. J. Appl. Crystallogr. 2010; 43: 186-190.
-
(2010)
J. Appl. Crystallogr.
, vol.43
, pp. 186-190
-
-
Winter, G.1
-
26
-
-
33644661556
-
A modified ACORN to solve protein structures at resolutions of 1.7 A or better
-
Jia-xing Y, Woolfson MM, Wilson KS, Dodson EJ. A modified ACORN to solve protein structures at resolutions of 1.7 A or better. Acta Crystallogr. D 2005; 61: 1465-1475.
-
(2005)
Acta Crystallogr. D
, vol.61
, pp. 1465-1475
-
-
Jia-xing, Y.1
Woolfson, M.M.2
Wilson, K.S.3
Dodson, E.J.4
-
27
-
-
37549039510
-
A short history of Shelx
-
Sheldrick GM. A short history of Shelx. Acta Crystallogr. A 2008; 64: 112-122.
-
(2008)
Acta Crystallogr. A
, vol.64
, pp. 112-122
-
-
Sheldrick, G.M.1
-
28
-
-
51349131440
-
XtalView, protein structure solution and protein graphics, a short history
-
McRee DE, Israel M. XtalView, protein structure solution and protein graphics, a short history. J. Struct. Biol. 2008; 163: 208-213.
-
(2008)
J. Struct. Biol.
, vol.163
, pp. 208-213
-
-
McRee, D.E.1
Israel, M.2
-
29
-
-
0000330205
-
On the use of the merging R factor as a quality indicator for X-ray data
-
Weiss MS, Hilgenfeld R. On the use of the merging R factor as a quality indicator for X-ray data. J. Appl. Crystallogr. 1997; 30: 203-205.
-
(1997)
J. Appl. Crystallogr.
, vol.30
, pp. 203-205
-
-
Weiss, M.S.1
Hilgenfeld, R.2
-
30
-
-
0030915704
-
Improved R-factors for diffraction data analysis in macromolecular crystallography
-
Diederichs K, Karplus PA. Improved R-factors for diffraction data analysis in macromolecular crystallography. Nat. Struct. Biol. 1997; 4: 269-275.
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 269-275
-
-
Diederichs, K.1
Karplus, P.A.2
-
31
-
-
0031473847
-
SWISS-MODEL and the Swiss-PDBViewer: an environment for comparative protein modeling
-
Guex N, Peitsch MC. SWISS-MODEL and the Swiss-PDBViewer: an environment for comparative protein modeling. Electrophoresis 1997; 18: 2714-2723.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
32
-
-
84877007782
-
-
Persistence of Vision Pty Ltd. [last accessed July 2012]
-
Persistence of Vision Pty Ltd. 2004 http://www.povray.org/ [last accessed July 2012]
-
(2004)
-
-
-
33
-
-
84877009279
-
-
The PyMOL Molecular Graphics System. [last accessed July 2012]
-
DeLano WL. The PyMOL Molecular Graphics System. 2002 http://www.pymol.org [last accessed July 2012]
-
(2002)
-
-
DeLano, W.L.1
-
34
-
-
84996051646
-
A novel peptide conformation: First unequivocal observation of the oxy-analog of a β-bend
-
Toniolo C, Valle GM, Crisma M, Formaggio F, Bavoso A, Benedetti E, Di Blasio B, Pavone V, Pedone C. A novel peptide conformation: First unequivocal observation of the oxy-analog of a β-bend. Biopolymers 1986; 25: 2237-2253.
-
(1986)
Biopolymers
, vol.25
, pp. 2237-2253
-
-
Toniolo, C.1
Valle, G.M.2
Crisma, M.3
Formaggio, F.4
Bavoso, A.5
Benedetti, E.6
Di Blasio, B.7
Pavone, V.8
Pedone, C.9
-
35
-
-
84856408778
-
10-helix at atomic resolution: the crystal structure of the peptaibol trichovirin I-4A in a polar environment suggests a transition to α-helix for membrane function
-
10-helix at atomic resolution: the crystal structure of the peptaibol trichovirin I-4A in a polar environment suggests a transition to α-helix for membrane function. Acta Crystallogr. D 2012; 68: 109-116.
-
(2012)
Acta Crystallogr. D
, vol.68
, pp. 109-116
-
-
Gessmann, R.1
Axford, D.2
Owen, R.L.3
Brückner, H.4
Petratos, K.5
-
37
-
-
0033994775
-
HELANAL: a program to characterize helix geometry in proteins
-
Bansal M, Kumar S, Velavan R. HELANAL: a program to characterize helix geometry in proteins. J. Biomol. Struct. Dyn. 2000; 17: 811-819.
-
(2000)
J. Biomol. Struct. Dyn.
, vol.17
, pp. 811-819
-
-
Bansal, M.1
Kumar, S.2
Velavan, R.3
-
38
-
-
0036158074
-
Spatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating
-
Shenkarev ZO, Balashova TA, Efremov RG, Yakimenko ZA, Ovchinnikova TV, Raap J, Arseniev AS. Spatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating. Biophys J. 2002; 82: 762-771.
-
(2002)
Biophys J.
, vol.82
, pp. 762-771
-
-
Shenkarev, Z.O.1
Balashova, T.A.2
Efremov, R.G.3
Yakimenko, Z.A.4
Ovchinnikova, T.V.5
Raap, J.6
Arseniev, A.S.7
-
39
-
-
0025924739
-
Crystal structure of [Leu1]zervamicin, a membrane ion-channel peptide: implications for gating mechanisms
-
Karle IL, Flippen-Anderson JL, Agarwalla S, Balaram P. Crystal structure of [Leu1]zervamicin, a membrane ion-channel peptide: implications for gating mechanisms. Proc. Natl. Acad. Sci. USA 1991; 88: 5307-5311.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 5307-5311
-
-
Karle, I.L.1
Flippen-Anderson, J.L.2
Agarwalla, S.3
Balaram, P.4
|