-
1
-
-
29144504177
-
At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies
-
doi:10.1128/AEM.71.12.7724-7736.2005. PMID:16332745
-
Ashelford, K.E., Chuzhanova, N.A., Fry, J.C., Jones, A.J., and Weightman, A.J. 2005. At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. Appl. Environ. Microbiol. 71(12): 7724-7736. doi:10.1128/AEM.71.12.7724-7736.2005. PMID:16332745.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, Issue.12
, pp. 7724-7736
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
2
-
-
13544268567
-
A new statistical approach for assessing similarity of species composition with incidence and abundance data
-
doi:10.1111/j.1461-0248.2004.00707.x
-
Chao, A., Chazdon, R.L., Colwell, R.K., and Shen, T.J. 2005. A new statistical approach for assessing similarity of species composition with incidence and abundance data. Ecol. Lett. 8(2): 148-159. doi:10.1111/j.1461-0248.2004.00707.x.
-
(2005)
Ecol. Lett
, vol.8
, Issue.2
, pp. 148-159
-
-
Chao, A.1
Chazdon, R.L.2
Colwell, R.K.3
Shen, T.J.4
-
3
-
-
0037391035
-
Long-term dynamics of phytoplankton assemblages: Microcystis-domination in Lake Taihu, a large shallow lake in China
-
doi:10.1093/plankt/25.4.445
-
Chen, Y., Qin, B., Teubner, K., and Dokulil, M.T. 2003. Long-term dynamics of phytoplankton assemblages: Microcystis-domination in Lake Taihu, a large shallow lake in China. J. Plankton Res. 25(4): 445-453. doi:10.1093/plankt/25.4.445.
-
(2003)
J. Plankton Res
, vol.25
, Issue.4
, pp. 445-453
-
-
Chen, Y.1
Qin, B.2
Teubner, K.3
Dokulil, M.T.4
-
4
-
-
0033012295
-
Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil
-
PMID:10347011
-
Chin, K.J., Lukow, T., and Conrad, R. 1999. Effect of temperature on structure and function of the methanogenic archaeal community in an anoxic rice field soil. Appl. Environ. Microbiol. 65(6): 2341-2349. PMID:10347011.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, Issue.6
, pp. 2341-2349
-
-
Chin, K.J.1
Lukow, T.2
Conrad, R.3
-
5
-
-
13444304367
-
The Ribosomal Database Project RDP-II: Sequences and tools for high-throughput rRNA analysis
-
Database issue, doi:10.1093/nar/gki038. PMID:15608200
-
Cole, J.R., Chai, B., Farris, R.J., Wang, Q., Kulam, S.A., McGarrell, D.M., et al. 2005. The Ribosomal Database Project RDP-II: sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res. 33(Database issue): D294-D296. doi:10.1093/nar/gki038. PMID:15608200.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam, S.A.5
McGarrell, D.M.6
-
6
-
-
77950649410
-
The global methane cycle: Recent advances in understanding the microbial processes involved
-
doi:10.1111/j.1758-2229.2009.00038.x
-
Conrad, R. 2009. The global methane cycle: recent advances in understanding the microbial processes involved. Environ. Microbiol. Rep. 1(5): 285-292. doi:10.1111/j.1758-2229.2009.00038.x.
-
(2009)
Environ. Microbiol. Rep
, vol.1
, Issue.5
, pp. 285-292
-
-
Conrad, R.1
-
7
-
-
34547227615
-
Characterization of methanogenic archaea and stable isotope fractionation during methane production in the profundal sediment of an oligotrophic lake Lake Stechlin, Germany
-
doi:10.4319/lo.2007.52.4.1393
-
Conrad, R., Chan, O., Claus, P., and Casper, P. 2007. Characterization of methanogenic archaea and stable isotope fractionation during methane production in the profundal sediment of an oligotrophic lake Lake Stechlin, Germany. Limnol. Oceanogr. 52(4): 1393-1406. doi:10.4319/lo.2007.52.4.1393.
-
(2007)
Limnol. Oceanogr
, vol.52
, Issue.4
, pp. 1393-1406
-
-
Conrad, R.1
Chan, O.2
Claus, P.3
Casper, P.4
-
8
-
-
63549123701
-
Characterization of stable isotope fractionation during methane production in the sediment of a eutrophic lake, Lake Dagow, Germany
-
doi:10.4319/lo.2009.54.2.0457
-
Conrad, R., Claus, P., and Casper, P. 2009. Characterization of stable isotope fractionation during methane production in the sediment of a eutrophic lake, Lake Dagow, Germany. Limnol. Oceanogr. 54(2): 457-471. doi:10.4319/lo.2009.54.2.0457.
-
(2009)
Limnol. Oceanogr
, vol.54
, Issue.2
, pp. 457-471
-
-
Conrad, R.1
Claus, P.2
Casper, P.3
-
9
-
-
77954695331
-
Methanogenic pathway, 13C isotope fractionation, and archaeal community composition in the sediment of two clear-water lakes of Amazonia
-
doi:10.4319/lo.2009.55.2.0689
-
Conrad, R., Klose, M., Claus, P., and Enrich-Prast, A. 2010a. Methanogenic pathway, 13C isotope fractionation, and archaeal community composition in the sediment of two clear-water lakes of Amazonia. Limnol. Oceanogr. 55(2): 689-702. doi:10.4319/lo.2009.55.2.0689.
-
(2010)
Limnol. Oceanogr
, vol.55
, Issue.2
, pp. 689-702
-
-
Conrad, R.1
Klose, M.2
Claus, P.3
Enrich-Prast, A.4
-
10
-
-
77954707730
-
Stable isotope fractionation during the methanogenic degradation of organic matter in the sediment of an acidic bog lake, Lake Grosse Fuchskuhle
-
doi:10.4319/lo.2010.55.5.1932
-
Conrad, R., Claus, P., and Casper, P. 2010b. Stable isotope fractionation during the methanogenic degradation of organic matter in the sediment of an acidic bog lake, Lake Grosse Fuchskuhle. Limnol. Oceanogr. 55(5): 1932-1942. doi:10.4319/lo.2010.55.5.1932.
-
(2010)
Limnol. Oceanogr
, vol.55
, Issue.5
, pp. 1932-1942
-
-
Conrad, R.1
Claus, P.2
Casper, P.3
-
11
-
-
77957603126
-
The role of biochemical engineering in the production of biofuels from microalgae
-
doi:10.1016/j.biortech.2010.06.014. PMID:20580548
-
Costa, J.A., and de Morais, M.G. 2011. The role of biochemical engineering in the production of biofuels from microalgae. Bioresour. Technol. 102(1): 2-9. doi:10.1016/j.biortech.2010.06.014. PMID:20580548.
-
(2011)
Bioresour. Technol
, vol.102
, Issue.1
, pp. 2-9
-
-
Costa, J.A.1
de Morais, M.G.2
-
12
-
-
70350475884
-
Correlation of methane production and functional gene transcriptional activity in a peat soil
-
doi:10.1128/AEM.01021-09. PMID:19749064
-
Freitag, T.E., and Prosser, J.I. 2009. Correlation of methane production and functional gene transcriptional activity in a peat soil. Appl. Environ. Microbiol. 75(21): 6679-6687. doi:10.1128/AEM.01021-09. PMID:19749064.
-
(2009)
Appl. Environ. Microbiol
, vol.75
, Issue.21
, pp. 6679-6687
-
-
Freitag, T.E.1
Prosser, J.I.2
-
13
-
-
83755195236
-
Microbial methane production in oxygenate water column of an oligotrophic lake
-
doi:10.1073/pnas.1110716108. PMID: 22089233
-
Grossart, H.-P., Frindte, K., Dziallas, C., Eckert, W., and Tang, K.W. 2011. Microbial methane production in oxygenate water column of an oligotrophic lake. Proc. Natl. Acad. Sci. U.S.A. 108(49): 19657-19661. doi:10.1073/pnas.1110716108. PMID: 22089233.
-
(2011)
Proc. Natl. Acad. Sci. U.S.A
, vol.108
, Issue.49
, pp. 19657-19661
-
-
Grossart, H.-P.1
Frindte, K.2
Dziallas, C.3
Eckert, W.4
Tang, K.W.5
-
14
-
-
2542508293
-
Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval
-
PMID:9501436
-
Großkopf, R., Janssen, P.H., and Liesack, W. 1998. Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval. Appl. Environ. Microbiol. 64(3): 960-969. PMID:9501436.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, Issue.3
, pp. 960-969
-
-
Großkopf, R.1
Janssen, P.H.2
Liesack, W.3
-
15
-
-
41149091348
-
Effects of temperature on the diversity and community structure of known methanogenic groups and other archaea in high Arctic peat
-
doi:10.1038/ismej.2007.84. PMID:18180745
-
Høj, L., Olsen, R.A., and Torsvik, V.L. 2008. Effects of temperature on the diversity and community structure of known methanogenic groups and other archaea in high Arctic peat. ISME J. 2(1): 37-48. doi:10.1038/ismej.2007.84. PMID:18180745.
-
(2008)
ISME J
, vol.2
, Issue.1
, pp. 37-48
-
-
Høj, L.1
Olsen, R.A.2
Torsvik, V.L.3
-
16
-
-
0028177080
-
A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates
-
See corresponding erratum in Mol. Biol. Evol. (1995), 12: 525
-
Kuhner, M.K., and Felsenstein, J. 1994. A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates. Mol. Biol. Evol. 11: 459-468. [See corresponding erratum in Mol. Biol. Evol. (1995), 12: 525.]
-
(1994)
Mol. Biol. Evol
, vol.11
, pp. 459-468
-
-
Kuhner, M.K.1
Felsenstein, J.2
-
17
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
doi:10.1093/bioinformatics/btm404. PMID:17846036
-
Larkin, M.A., Blackshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics, 23(21): 2947-2948. doi:10.1093/bioinformatics/btm404. PMID:17846036.
-
(2007)
Bioinformatics
, vol.23
, Issue.21
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
-
18
-
-
78651461422
-
Short-term bacterial community composition dynamics in response to accumulation and breakdown of Microcystis blooms
-
doi:10.1016/j.watres.2010.11.011. PMID: 21185055
-
Li, H., Xing, P., Chen, M., Bian, Y., and Wu, Q.L. 2011. Short-term bacterial community composition dynamics in response to accumulation and breakdown of Microcystis blooms. Water Res. 45(4): 1702-1710. doi:10.1016/j.watres.2010.11.011. PMID: 21185055.
-
(2011)
Water Res
, vol.45
, Issue.4
, pp. 1702-1710
-
-
Li, H.1
Xing, P.2
Chen, M.3
Bian, Y.4
Wu, Q.L.5
-
19
-
-
29144523199
-
Effect of temperature on anaerobic ethanol oxidation and methanogenesis in acidic peat from a northern wetland
-
doi:10.1128/AEM.71.12.8191-8200.2005. PMID:16332802
-
Metje, M., and Frenzel, P. 2005. Effect of temperature on anaerobic ethanol oxidation and methanogenesis in acidic peat from a northern wetland. Appl. Environ. Microbiol. 71(12): 8191-8200. doi:10.1128/AEM.71.12.8191-8200.2005. PMID:16332802.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, Issue.12
, pp. 8191-8200
-
-
Metje, M.1
Frenzel, P.2
-
20
-
-
33947186727
-
Methanogenesis and methanogenic pathways in a peat from subarctic permafrost
-
doi:10.1111/j.1462-2920.2006.01217.x. PMID: 17359267
-
Metje, M., and Frenzel, P. 2007. Methanogenesis and methanogenic pathways in a peat from subarctic permafrost. Environ. Microbiol. 9(4): 954-964. doi:10.1111/j.1462-2920.2006.01217.x. PMID: 17359267.
-
(2007)
Environ. Microbiol
, vol.9
, Issue.4
, pp. 954-964
-
-
Metje, M.1
Frenzel, P.2
-
21
-
-
1842853212
-
Fast pyrolysis of microalgae to produce renewable fuels
-
doi:10.1016/j.jaap.2003.11.004
-
Miao, X., Wu, Q., and Yang, C. 2004. Fast pyrolysis of microalgae to produce renewable fuels. J. Anal. Appl. Pyrolysis, 71(2): 855-863. doi:10.1016/j.jaap.2003.11.004.
-
(2004)
J. Anal. Appl. Pyrolysis
, vol.71
, Issue.2
, pp. 855-863
-
-
Miao, X.1
Wu, Q.2
Yang, C.3
-
22
-
-
41849108104
-
Blooms like it hot
-
doi:10.1126/science.1155398. PMID: 18388279
-
Paerl, H.W., and Huisman, J. 2008. Blooms like it hot. Science, 320(5872): 57-58. doi:10.1126/science.1155398. PMID: 18388279.
-
(2008)
Science
, vol.320
, Issue.5872
, pp. 57-58
-
-
Paerl, H.W.1
Huisman, J.2
-
23
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
doi:10.1128/AEM.71.3.1501-1506.2005. PMID: 15746353
-
Schloss, P.D., and Handelsman, J. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microbiol. 71(3): 1501-1506. doi:10.1128/AEM.71.3.1501-1506.2005. PMID: 15746353.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, Issue.3
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
24
-
-
38749100919
-
Response of the methanogenic microbial community of a profundal lake sediment Lake Kinneret, Israel, to algal deposition
-
doi:10.4319/lo.2008.53.1.0113
-
Schwarz, J.I.K., Eckert, W., and Conrad, R. 2008. Response of the methanogenic microbial community of a profundal lake sediment Lake Kinneret, Israel, to algal deposition. Limnol. Oceanogr. 53(1): 113-121. doi:10.4319/lo.2008.53.1.0113.
-
(2008)
Limnol. Oceanogr
, vol.53
, Issue.1
, pp. 113-121
-
-
Schwarz, J.I.K.1
Eckert, W.2
Conrad, R.3
-
25
-
-
0242458107
-
The use of a fuel containing Chlorella vulgaris in a diesel engine
-
doi:10.1016/j.enzmictec.2003.01.001
-
Scragg, A.H., Morrison, J., and Shales, S.W. 2003. The use of a fuel containing Chlorella vulgaris in a diesel engine. Enzyme Microb. Technol. 33(7): 884-889. doi:10.1016/j.enzmictec.2003.01.001.
-
(2003)
Enzyme Microb. Technol
, vol.33
, Issue.7
, pp. 884-889
-
-
Scragg, A.H.1
Morrison, J.2
Shales, S.W.3
-
26
-
-
0003341851
-
Development and application of nucleic acid probes
-
Edited by E. Stackebrandt and M. Goodfellow. Wiley, Cichester, England
-
Stahl, D.A., and Amann, R. 1991. Development and application of nucleic acid probes. In Nucleic acid techniques in bacterial systematics. Edited by E. Stackebrandt and M. Goodfellow. Wiley, Cichester, England. pp. 205-248.
-
(1991)
Nucleic Acid Techniques In Bacterial Systematics
, pp. 205-248
-
-
Stahl, D.A.1
Amann, R.2
-
27
-
-
0041857043
-
-
Williams & Wilkins, Baltimore, Md., USA
-
Staley J.T., Bryant, M.P., Pfennig N., Holt J.G. (Editors). 1984. Bergey's manual of systematic bacteriology. Williams & Wilkins, Baltimore, Md., USA.
-
(1984)
Bergey's Manual of Systematic Bacteriology
-
-
Staley, J.T.1
Bryant, M.P.2
Pfennig, N.3
Holt, J.G.4
-
28
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis MEGA. Software version 4.0
-
doi:10.1093/molbev/msm092. PMID:17488738
-
Tamura, K., Dudley, J., Nei, M., and Kumar, S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis MEGA. Software version 4.0. Mol. Biol. Evol. 24(8): 1596-1599. doi:10.1093/molbev/msm092. PMID:17488738.
-
(2007)
Mol. Biol. Evol
, vol.24
, Issue.8
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
29
-
-
33847024322
-
Methane fluxes from the littoral zone of hypereutrophic Taihu Lake, China
-
doi:10.1029/2005JD006864
-
Wang, H., Lu, J., Wang, W., Yin, L., and Chen, Y. 2006. Methane fluxes from the littoral zone of hypereutrophic Taihu Lake, China. J. Geophys. Res. 111(D17): D17109. doi:10.1029/2005JD006864.
-
(2006)
J. Geophys. Res
, vol.111
, Issue.D17
-
-
Wang, H.1
Lu, J.2
Wang, W.3
Yin, L.4
Chen, Y.5
-
30
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
doi:10.1128/AEM.00062-07. PMID:17586664
-
Wang, Q., Garrity, G.M., Tiedje, J.M., and Cole, J.R. 2007. Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73(16): 5261-5267. doi:10.1128/AEM.00062-07. PMID:17586664.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, Issue.16
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
31
-
-
79955056088
-
Novel Clostridium populations involved in the anaerobic degradation of Microcystis blooms
-
doi:10.1038/ismej.2010.176. PMID:21107445
-
Xing, P., Guo, L., Tian, W., and Wu, Q.L. 2011. Novel Clostridium populations involved in the anaerobic degradation of Microcystis blooms. ISME J. 5(5): 792-800. doi:10.1038/ismej.2010.176. PMID:21107445.
-
(2011)
ISME J
, vol.5
, Issue.5
, pp. 792-800
-
-
Xing, P.1
Guo, L.2
Tian, W.3
Wu, Q.L.4
|